RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 OGFOD3Q6PK18 319 aa5.04□□□□□ -1.6
CCDC39-203ENST00000473854 XKR5Q6UX68 686 aa5.04□□□□□ -1.6
CCDC39-203ENST00000473854 ZNF574Q6ZN55 896 aaPredicted RBP5.04□□□□□ -1.6
CCDC39-203ENST00000473854 PI4K2BQ8TCG2 481 aa5.04□□□□□ -1.6
CCDC39-203ENST00000473854 NETO1Q8TDF5 533 aa5.04□□□□□ -1.6
CCDC39-203ENST00000473854 TMEM63CQ9P1W3 806 aa5.04□□□□□ -1.6
CCDC39-203ENST00000473854 VAV3Q9UKW4 847 aa5.04□□□□□ -1.6
CCDC39-203ENST00000473854 ACTL7BQ9Y614 415 aa5.04□□□□□ -1.6
CCDC39-203ENST00000473854 EDN3P14138 238 aa5.03□□□□□ -1.6
CCDC39-203ENST00000473854 MESP2Q0VG99 397 aa5.03□□□□□ -1.6
CCDC39-203ENST00000473854 VN1R5Q7Z5H4 357 aa5.03□□□□□ -1.6
CCDC39-203ENST00000473854 SPRED2Q7Z698 418 aa5.03□□□□□ -1.6
CCDC39-203ENST00000473854 NXPE3Q969Y0 559 aa5.03□□□□□ -1.6
CCDC39-203ENST00000473854 PRIMPOLQ96LW4 560 aa5.03□□□□□ -1.6
CCDC39-203ENST00000473854 SEMA6CQ9H3T2 930 aa5.03□□□□□ -1.6
CCDC39-203ENST00000473854 ACSS3Q9H6R3 686 aa5.03□□□□□ -1.6
CCDC39-203ENST00000473854 CYP11A1P05108 521 aa5.02□□□□□ -1.61
CCDC39-203ENST00000473854 RNASE1P07998 156 aaKnown RBP5.02□□□□□ -1.61
CCDC39-203ENST00000473854 ESRRAP11474 423 aaPredicted RBP5.02□□□□□ -1.61
CCDC39-203ENST00000473854 RFX1P22670 979 aa5.02□□□□□ -1.61
CCDC39-203ENST00000473854 GSTM4Q03013 218 aa5.02□□□□□ -1.61
CCDC39-203ENST00000473854 PRKCQQ04759 706 aa5.02□□□□□ -1.61
CCDC39-203ENST00000473854 HGSNATQ68CP4 663 aa5.02□□□□□ -1.61
CCDC39-203ENST00000473854 PROSER2Q86WR7 435 aaPredicted RBP5.02□□□□□ -1.61
CCDC39-203ENST00000473854 ZSWIM9Q86XI8 627 aa5.02□□□□□ -1.61
CCDC39-203ENST00000473854 ANKLE2Q86XL3 938 aa5.02□□□□□ -1.61
CCDC39-203ENST00000473854 WFDC3Q8IUB2 231 aa5.02□□□□□ -1.61
CCDC39-203ENST00000473854 NUDT16Q96DE0 195 aaKnown RBP5.02□□□□□ -1.61
CCDC39-203ENST00000473854 OSMRQ99650 979 aa5.02□□□□□ -1.61
CCDC39-203ENST00000473854 MBNL3Q9NUK0 354 aaKnown RBP5.02□□□□□ -1.61
CCDC39-203ENST00000473854 CNTN3Q9P232 1028 aa5.02□□□□□ -1.61
CCDC39-203ENST00000473854 NOVA2Q9UNW9 492 aaKnown RBP5.02□□□□□ -1.61
CCDC39-203ENST00000473854 PRMT3O60678 531 aa5.01□□□□□ -1.61
CCDC39-203ENST00000473854 DLGAP3O95886 979 aa5.01□□□□□ -1.61
CCDC39-203ENST00000473854 ACPPP15309 386 aa5.01□□□□□ -1.61
CCDC39-203ENST00000473854 OCLNQ16625 522 aa5.01□□□□□ -1.61
CCDC39-203ENST00000473854 FAM26DQ5JW98 314 aa5.01□□□□□ -1.61
CCDC39-203ENST00000473854 DYMQ7RTS9 669 aa5.01□□□□□ -1.61
CCDC39-203ENST00000473854 LRRC56Q8IYG6 542 aaPredicted RBP5.01□□□□□ -1.61
CCDC39-203ENST00000473854 C1orf127Q8N9H9 656 aa5.01□□□□□ -1.61
CCDC39-203ENST00000473854 LRRN4CLQ8ND94 238 aa5.01□□□□□ -1.61
CCDC39-203ENST00000473854 FLAD1Q8NFF5 587 aa5.01□□□□□ -1.61
CCDC39-203ENST00000473854 DDX54Q8TDD1 881 aaKnown RBP5.01□□□□□ -1.61
CCDC39-203ENST00000473854 BHLHE41Q9C0J9 482 aaPredicted RBP5.01□□□□□ -1.61
CCDC39-203ENST00000473854 MKNK2Q9HBH9 465 aa5.01□□□□□ -1.61
CCDC39-203ENST00000473854 CD8BP10966 210 aa5□□□□□ -1.61
CCDC39-203ENST00000473854 CFPP27918 469 aa5□□□□□ -1.61
CCDC39-203ENST00000473854 KCNMB1Q16558 191 aa5□□□□□ -1.61
CCDC39-203ENST00000473854 ANGEL2Q5VTE6 544 aaKnown RBP5□□□□□ -1.61
CCDC39-203ENST00000473854 ZKSCAN3Q9BRR0 538 aa5□□□□□ -1.61
CCDC39-203ENST00000473854 RAD18Q9NS91 495 aa5□□□□□ -1.61
CCDC39-203ENST00000473854 ASPAP45381 313 aa4.99□□□□□ -1.61
CCDC39-203ENST00000473854 HNRNPUQ00839 825 aaKnown RBP eCLIP4.99□□□□□ -1.61
CCDC39-203ENST00000473854 BNIP3Q12983 259 aa4.99□□□□□ -1.61
CCDC39-203ENST00000473854 IFI16Q16666 785 aaKnown RBP4.99□□□□□ -1.61
CCDC39-203ENST00000473854 SLC23A3Q6PIS1 610 aa4.99□□□□□ -1.61
CCDC39-203ENST00000473854 SEZ6L2Q6UXD5 910 aa4.99□□□□□ -1.61
CCDC39-203ENST00000473854 ARHGAP27Q6ZUM4 889 aa4.99□□□□□ -1.61
CCDC39-203ENST00000473854 CILP2Q8IUL8 1156 aa4.99□□□□□ -1.61
CCDC39-203ENST00000473854 ASAP3Q8TDY4 903 aa4.99□□□□□ -1.61
CCDC39-203ENST00000473854 HRASLS5Q96KN8 279 aa4.99□□□□□ -1.61
CCDC39-203ENST00000473854 HHIPQ96QV1 700 aa4.99□□□□□ -1.61
CCDC39-203ENST00000473854 GSX1Q9H4S2 264 aaPredicted RBP4.99□□□□□ -1.61
CCDC39-203ENST00000473854 C1GALT1Q9NS00 363 aa4.99□□□□□ -1.61
CCDC39-203ENST00000473854 CXXC1Q9P0U4 656 aaPredicted RBP4.99□□□□□ -1.61
CCDC39-203ENST00000473854 AP4E1Q9UPM8 1137 aa4.99□□□□□ -1.61
CCDC39-203ENST00000473854 SYNGAP1Q96PV0 1343 aa4.98□□□□□ -1.61
CCDC39-203ENST00000473854 TMEM265A0A087WTH1 108 aa4.98□□□□□ -1.61
CCDC39-203ENST00000473854 ZSCAN22P10073 491 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-203ENST00000473854 ELOAQ14241 798 aaKnown RBP4.98□□□□□ -1.61
CCDC39-203ENST00000473854 NAA30Q147X3 362 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-203ENST00000473854 POU4F3Q15319 338 aa4.98□□□□□ -1.61
CCDC39-203ENST00000473854 MLANAQ16655 118 aa4.98□□□□□ -1.61
CCDC39-203ENST00000473854 AKAP4Q5JQC9 854 aa4.98□□□□□ -1.61
CCDC39-203ENST00000473854 TTLL10Q6ZVT0 673 aa4.98□□□□□ -1.61
CCDC39-203ENST00000473854 FNBP4Q8N3X1 1017 aaPredicted RBP4.98□□□□□ -1.61
CCDC39-203ENST00000473854 MKNK1Q9BUB5 465 aa4.98□□□□□ -1.61
CCDC39-203ENST00000473854 NRSN2Q9GZP1 204 aa4.98□□□□□ -1.61
CCDC39-203ENST00000473854 FAM105AQ9NUU6 356 aa4.98□□□□□ -1.61
CCDC39-203ENST00000473854 ADAMTS6Q9UKP5 1117 aa4.98□□□□□ -1.61
CCDC39-203ENST00000473854 DAGLAQ9Y4D2 1042 aa4.98□□□□□ -1.61
CCDC39-203ENST00000473854 TRPA1O75762 1119 aa4.97□□□□□ -1.61
CCDC39-203ENST00000473854 MAOBP27338 520 aa4.97□□□□□ -1.61
CCDC39-203ENST00000473854 C1QL4Q86Z23 238 aa4.97□□□□□ -1.61
CCDC39-203ENST00000473854 PLD6Q8N2A8 252 aaKnown RBP4.97□□□□□ -1.61
CCDC39-203ENST00000473854 CORO1BQ9BR76 489 aa4.97□□□□□ -1.61
CCDC39-203ENST00000473854 ZBTB39O15060 712 aa4.96□□□□□ -1.62
CCDC39-203ENST00000473854 AOC3Q16853 763 aa4.96□□□□□ -1.62
CCDC39-203ENST00000473854 LCNL1Q6ZST4 164 aa4.96□□□□□ -1.62
CCDC39-203ENST00000473854 SNX29Q8TEQ0 813 aa4.96□□□□□ -1.62
CCDC39-203ENST00000473854 CHRDQ9H2X0 955 aa4.96□□□□□ -1.62
CCDC39-203ENST00000473854 CLEC4MQ9H2X3 399 aaPredicted RBP4.96□□□□□ -1.62
CCDC39-203ENST00000473854 LMCD1Q9NZU5 365 aa4.96□□□□□ -1.62
CCDC39-203ENST00000473854 NFIBO00712 420 aa4.95□□□□□ -1.62
CCDC39-203ENST00000473854 PHACTR2O75167 634 aa4.95□□□□□ -1.62
CCDC39-203ENST00000473854 BUD31P41223 144 aaPredicted RBP4.95□□□□□ -1.62
CCDC39-203ENST00000473854 PCDH1Q08174 1060 aa4.95□□□□□ -1.62
CCDC39-203ENST00000473854 C8orf34Q49A92 452 aa4.95□□□□□ -1.62
CCDC39-203ENST00000473854 EDEM1Q92611 657 aa4.95□□□□□ -1.62
CCDC39-203ENST00000473854 KRTAP9-3Q9BYQ3 159 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms