RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 CACNB3P54284 484 aa16.07■□□□□ 0.16
TRAF4-209ENST00000473421 EXOSC9Q06265 439 aaKnown RBP16.07■□□□□ 0.16
TRAF4-209ENST00000473421 VGLL4Q14135 290 aa16.07■□□□□ 0.16
TRAF4-209ENST00000473421 MFSD14BQ5SR56 506 aa16.07■□□□□ 0.16
TRAF4-209ENST00000473421 LDHAL6AQ6ZMR3 332 aa16.07■□□□□ 0.16
TRAF4-209ENST00000473421 DZIP1LQ8IYY4 767 aaKnown RBP16.07■□□□□ 0.16
TRAF4-209ENST00000473421 ZNF333Q96JL9 665 aa16.07■□□□□ 0.16
TRAF4-209ENST00000473421 IQSEC3Q9UPP2 1182 aaPredicted RBP16.07■□□□□ 0.16
TRAF4-209ENST00000473421 ECM2O94769 699 aaPredicted RBP16.06■□□□□ 0.16
TRAF4-209ENST00000473421 GCC1Q96CN9 775 aa16.06■□□□□ 0.16
TRAF4-209ENST00000473421 CCL15-CCL14A0A0B4J2E2 113 aa16.05■□□□□ 0.16
TRAF4-209ENST00000473421 CRKP46108 304 aa16.05■□□□□ 0.16
TRAF4-209ENST00000473421 CCL15Q16663 113 aa16.05■□□□□ 0.16
TRAF4-209ENST00000473421 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.05■□□□□ 0.166e-8■□□□□ 8.4
TRAF4-209ENST00000473421 OTUD5Q96G74 571 aa16.05■□□□□ 0.16
TRAF4-209ENST00000473421 CNNM1Q9NRU3 951 aa16.05■□□□□ 0.16
TRAF4-209ENST00000473421 SERPINA10Q9UK55 444 aa16.05■□□□□ 0.16
TRAF4-209ENST00000473421 COLQQ9Y215 455 aaPredicted RBP16.05■□□□□ 0.16
TRAF4-209ENST00000473421 SZT2Q5T011 3432 aa16.04■□□□□ 0.16
TRAF4-209ENST00000473421 IL16Q14005 1332 aa16.04■□□□□ 0.16
TRAF4-209ENST00000473421 GRM8O00222 908 aa16.04■□□□□ 0.16
TRAF4-209ENST00000473421 CTGFP29279 349 aa16.04■□□□□ 0.16
TRAF4-209ENST00000473421 HIBADHP31937 336 aaKnown RBP16.04■□□□□ 0.16
TRAF4-209ENST00000473421 MAP3K9P80192 1104 aa16.04■□□□□ 0.16
TRAF4-209ENST00000473421 TAF1CQ15572 869 aaPredicted RBP16.04■□□□□ 0.16
TRAF4-209ENST00000473421 CCDC57Q2TAC2 916 aa16.04■□□□□ 0.16
TRAF4-209ENST00000473421 OTUD7BQ6GQQ9 843 aa16.04■□□□□ 0.16
TRAF4-209ENST00000473421 SH3TC2Q8TF17 1288 aa16.04■□□□□ 0.16
TRAF4-209ENST00000473421 SUCLG2Q96I99 432 aa16.04■□□□□ 0.16
TRAF4-209ENST00000473421 ARAP2Q8WZ64 1704 aa16.03■□□□□ 0.16
TRAF4-209ENST00000473421 ZKSCAN4Q969J2 545 aaPredicted RBP16.03■□□□□ 0.16
TRAF4-209ENST00000473421 RIPOR2Q9Y4F9 1068 aa16.03■□□□□ 0.16
TRAF4-209ENST00000473421 SNCAIPQ9Y6H5 919 aa16.03■□□□□ 0.16
TRAF4-209ENST00000473421 CACNA1FO60840 1977 aa16.02■□□□□ 0.16
TRAF4-209ENST00000473421 BTBD19C9JJ37 291 aa16.02■□□□□ 0.16
TRAF4-209ENST00000473421 UBE4AQ14139 1066 aa16.02■□□□□ 0.16
TRAF4-209ENST00000473421 TAF7LQ5H9L4 462 aa16.02■□□□□ 0.16
TRAF4-209ENST00000473421 CEP290O15078 2479 aa16.01■□□□□ 0.15
TRAF4-209ENST00000473421 H0YGN5 161 aa16.01■□□□□ 0.15
TRAF4-209ENST00000473421 NBPF7P0C2Y1 421 aaPredicted RBP16.01■□□□□ 0.15
TRAF4-209ENST00000473421 CHAF1AQ13111 956 aaPredicted RBP16.01■□□□□ 0.15
TRAF4-209ENST00000473421 SLC9C1Q4G0N8 1177 aa16.01■□□□□ 0.15
TRAF4-209ENST00000473421 LRRC24Q50LG9 513 aa16.01■□□□□ 0.15
TRAF4-209ENST00000473421 FBXO33Q7Z6M2 555 aa16.01■□□□□ 0.15
TRAF4-209ENST00000473421 ZFYVE28Q9HCC9 887 aa16.01■□□□□ 0.15
TRAF4-209ENST00000473421 SPDYE5A6NIY4 337 aa16■□□□□ 0.15
TRAF4-209ENST00000473421 IRF6O14896 467 aa16■□□□□ 0.15
TRAF4-209ENST00000473421 GTF2A2P52657 109 aa16■□□□□ 0.15
TRAF4-209ENST00000473421 TNFAIP1Q13829 316 aa16■□□□□ 0.15
TRAF4-209ENST00000473421 TMEM106CQ9BVX2 250 aa16■□□□□ 0.15
TRAF4-209ENST00000473421 TRIOBPQ9H2D6 2365 aa16■□□□□ 0.15
TRAF4-209ENST00000473421 RANBP2P49792 3224 aaKnown RBP15.99■□□□□ 0.15
TRAF4-209ENST00000473421 MTFR1Q15390 333 aa15.99■□□□□ 0.15
TRAF4-209ENST00000473421 SLC4A8Q2Y0W8 1093 aa15.99■□□□□ 0.15
TRAF4-209ENST00000473421 APOBEC3HQ6NTF7 200 aaKnown RBP15.99■□□□□ 0.15
TRAF4-209ENST00000473421 SLC4A10Q6U841 1118 aa15.99■□□□□ 0.15
TRAF4-209ENST00000473421 KLHDC4Q8TBB5 520 aa15.99■□□□□ 0.15
TRAF4-209ENST00000473421 SHISA4Q96DD7 197 aa15.99■□□□□ 0.15
TRAF4-209ENST00000473421 C9orf78Q9NZ63 289 aaPredicted RBP15.99■□□□□ 0.15
TRAF4-209ENST00000473421 TLR2O60603 784 aa15.98■□□□□ 0.15
TRAF4-209ENST00000473421 BCAMP50895 628 aa15.98■□□□□ 0.15
TRAF4-209ENST00000473421 LACTBP83111 547 aaPredicted RBP15.98■□□□□ 0.15
TRAF4-209ENST00000473421 MIGA2Q7L4E1 593 aa15.98■□□□□ 0.15
TRAF4-209ENST00000473421 ANKRD44Q8N8A2 993 aa15.98■□□□□ 0.15
TRAF4-209ENST00000473421 VGLL2Q8N8G2 317 aa15.98■□□□□ 0.15
TRAF4-209ENST00000473421 WRNIP1Q96S55 665 aa15.98■□□□□ 0.15
TRAF4-209ENST00000473421 CSADQ9Y600 493 aa15.98■□□□□ 0.15
TRAF4-209ENST00000473421 INPP5BP32019 993 aa15.97■□□□□ 0.15
TRAF4-209ENST00000473421 BICC1Q9H694 974 aaKnown RBP15.97■□□□□ 0.15
TRAF4-209ENST00000473421 ALDH1L1O75891 902 aa15.96■□□□□ 0.15
TRAF4-209ENST00000473421 MOGSQ13724 837 aa15.96■□□□□ 0.15
TRAF4-209ENST00000473421 ERO1BQ86YB8 467 aa15.96■□□□□ 0.15
TRAF4-209ENST00000473421 WDR63Q8IWG1 891 aa15.96■□□□□ 0.15
TRAF4-209ENST00000473421 CPA4Q9UI42 421 aa15.96■□□□□ 0.15
TRAF4-209ENST00000473421 CETPP11597 493 aa15.95■□□□□ 0.14
TRAF4-209ENST00000473421 TNNI2P48788 182 aa15.95■□□□□ 0.14
TRAF4-209ENST00000473421 C17orf99Q6UX52 265 aa15.95■□□□□ 0.14
TRAF4-209ENST00000473421 NBPF11Q86T75 865 aa15.95■□□□□ 0.14
TRAF4-209ENST00000473421 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.95■□□□□ 0.14
TRAF4-209ENST00000473421 TEKT1Q969V4 418 aa15.95■□□□□ 0.14
TRAF4-209ENST00000473421 TRIM47Q96LD4 638 aa15.95■□□□□ 0.14
TRAF4-209ENST00000473421 ZDHHC15Q96MV8 337 aa15.95■□□□□ 0.14
TRAF4-209ENST00000473421 SRCIN1Q9C0H9 1055 aa15.95■□□□□ 0.14
TRAF4-209ENST00000473421 ADGRA2Q96PE1 1338 aa15.94■□□□□ 0.14
TRAF4-209ENST00000473421 HDLBPQ00341 1268 aaKnown RBP15.94■□□□□ 0.14
TRAF4-209ENST00000473421 RABL6Q3YEC7 729 aaPredicted RBP15.94■□□□□ 0.14
TRAF4-209ENST00000473421 NCBP3Q53F19 620 aaKnown RBP15.94■□□□□ 0.14
TRAF4-209ENST00000473421 UTYO14607 1347 aa15.94■□□□□ 0.14
TRAF4-209ENST00000473421 MROH5Q6ZUA9 1318 aa15.94■□□□□ 0.14
TRAF4-209ENST00000473421 PDE8BO95263 885 aa15.93■□□□□ 0.14
TRAF4-209ENST00000473421 SLURP2P0DP57 97 aa15.93■□□□□ 0.14
TRAF4-209ENST00000473421 PPIL2Q13356 520 aa15.93■□□□□ 0.14
TRAF4-209ENST00000473421 SNAPC2Q13487 334 aa15.93■□□□□ 0.14
TRAF4-209ENST00000473421 METTL24Q5JXM2 366 aa15.93■□□□□ 0.14
TRAF4-209ENST00000473421 CHRDL2Q6WN34 429 aa15.93■□□□□ 0.14
TRAF4-209ENST00000473421 VPS37DQ86XT2 251 aa15.93■□□□□ 0.14
TRAF4-209ENST00000473421 ZFPM1Q8IX07 1006 aa15.93■□□□□ 0.14
TRAF4-209ENST00000473421 FGFR2P21802 821 aa15.92■□□□□ 0.14
TRAF4-209ENST00000473421 OSBPP22059 807 aa15.92■□□□□ 0.14
TRAF4-209ENST00000473421 PSMC4P43686 418 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 1794.1 ms