RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 EYA2O00167 538 aa16.47■□□□□ 0.23
NHLRC3-204ENST00000473371 UBASH3AP57075 661 aa16.47■□□□□ 0.23
NHLRC3-204ENST00000473371 NOL10Q9BSC4 688 aaKnown RBP16.47■□□□□ 0.23
NHLRC3-204ENST00000473371 TAOK2Q9UL54 1235 aa16.47■□□□□ 0.23
NHLRC3-204ENST00000473371 ARFGEF2Q9Y6D5 1785 aa16.46■□□□□ 0.23
NHLRC3-204ENST00000473371 CBFA2T2O43439 604 aa16.46■□□□□ 0.23
NHLRC3-204ENST00000473371 SYKP43405 635 aa16.46■□□□□ 0.23
NHLRC3-204ENST00000473371 KIF23Q02241 960 aaPredicted RBP16.46■□□□□ 0.23
NHLRC3-204ENST00000473371 MNS1Q8NEH6 495 aa16.46■□□□□ 0.23
NHLRC3-204ENST00000473371 PODXL2Q9NZ53 605 aa16.46■□□□□ 0.23
NHLRC3-204ENST00000473371 HPS5Q9UPZ3 1129 aa16.46■□□□□ 0.23
NHLRC3-204ENST00000473371 PHLPP2Q6ZVD8 1323 aa16.46■□□□□ 0.23
NHLRC3-204ENST00000473371 LRRFIP1Q32MZ4 808 aaKnown RBP16.46■□□□□ 0.23
NHLRC3-204ENST00000473371 RALYLQ86SE5 291 aaKnown RBP16.46■□□□□ 0.23
NHLRC3-204ENST00000473371 ARGLU1Q9NWB6 273 aaPredicted RBP16.46■□□□□ 0.23
NHLRC3-204ENST00000473371 A0A0U1RQG5 324 aaPredicted RBP16.45■□□□□ 0.22
NHLRC3-204ENST00000473371 WDHD1O75717 1129 aaPredicted RBP16.45■□□□□ 0.22
NHLRC3-204ENST00000473371 CFAP100Q494V2 611 aa16.45■□□□□ 0.22
NHLRC3-204ENST00000473371 CWC25Q9NXE8 425 aaPredicted RBP16.45■□□□□ 0.22
NHLRC3-204ENST00000473371 FHOD1Q9Y613 1164 aa16.45■□□□□ 0.22
NHLRC3-204ENST00000473371 MROH7-TTC4A0A0A0MT08 1334 aa16.45■□□□□ 0.22
NHLRC3-204ENST00000473371 URI1O94763 535 aaPredicted RBP16.45■□□□□ 0.22
NHLRC3-204ENST00000473371 DPF2Q92785 391 aa16.45■□□□□ 0.22
NHLRC3-204ENST00000473371 STRCP1A6NGW2 1772 aa16.45■□□□□ 0.22
NHLRC3-204ENST00000473371 RGPD5Q99666 1765 aa16.45■□□□□ 0.22
NHLRC3-204ENST00000473371 FGAP02671 866 aa16.45■□□□□ 0.22
NHLRC3-204ENST00000473371 SLC39A14Q15043 492 aa16.45■□□□□ 0.22
NHLRC3-204ENST00000473371 MB21D2Q8IYB1 491 aaPredicted RBP16.45■□□□□ 0.22
NHLRC3-204ENST00000473371 NCOA7Q8NI08 942 aa16.45■□□□□ 0.22
NHLRC3-204ENST00000473371 PNMA6AP0CW24 399 aaPredicted RBP16.44■□□□□ 0.22
NHLRC3-204ENST00000473371 FAM193AP78312 1265 aa16.44■□□□□ 0.22
NHLRC3-204ENST00000473371 MYL5Q02045 173 aa16.44■□□□□ 0.22
NHLRC3-204ENST00000473371 TMCO3Q6UWJ1 677 aa16.44■□□□□ 0.22
NHLRC3-204ENST00000473371 TIGD1Q96MW7 591 aa16.44■□□□□ 0.22
NHLRC3-204ENST00000473371 UTP14AQ9BVJ6 771 aaKnown RBP16.44■□□□□ 0.22
NHLRC3-204ENST00000473371 XIRP1Q702N8 1843 aaKnown RBP16.44■□□□□ 0.22
NHLRC3-204ENST00000473371 TTC39AQ5SRH9 613 aa16.44■□□□□ 0.22
NHLRC3-204ENST00000473371 KRT28Q7Z3Y7 464 aa16.44■□□□□ 0.22
NHLRC3-204ENST00000473371 HSD3B7Q9H2F3 369 aa16.44■□□□□ 0.22
NHLRC3-204ENST00000473371 ANKLE2Q86XL3 938 aa16.43■□□□□ 0.22
NHLRC3-204ENST00000473371 TUBE1Q9UJT0 475 aa16.43■□□□□ 0.22
NHLRC3-204ENST00000473371 TOP1P11387 765 aaKnown RBP16.43■□□□□ 0.22
NHLRC3-204ENST00000473371 CABP4P57796 275 aa16.43■□□□□ 0.22
NHLRC3-204ENST00000473371 ANTXR2P58335 489 aa16.43■□□□□ 0.22
NHLRC3-204ENST00000473371 GNL2Q13823 731 aaKnown RBP16.43■□□□□ 0.22
NHLRC3-204ENST00000473371 HSP90AB3PQ58FF7 597 aa16.43■□□□□ 0.22
NHLRC3-204ENST00000473371 CCDC158Q5M9N0 1113 aa16.43■□□□□ 0.22
NHLRC3-204ENST00000473371 OLFM4Q6UX06 510 aa16.43■□□□□ 0.22
NHLRC3-204ENST00000473371 CREBRFQ8IUR6 639 aa16.43■□□□□ 0.22
NHLRC3-204ENST00000473371 DCAF5Q96JK2 942 aa16.43■□□□□ 0.22
NHLRC3-204ENST00000473371 PUS3Q9BZE2 481 aaKnown RBP16.43■□□□□ 0.22
NHLRC3-204ENST00000473371 CEP126Q9P2H0 1117 aa16.43■□□□□ 0.22
NHLRC3-204ENST00000473371 GOLGA8FQ08AF8 430 aa16.43■□□□□ 0.22
NHLRC3-204ENST00000473371 GOLGA8DPQ0D2H9 430 aa16.43■□□□□ 0.22
NHLRC3-204ENST00000473371 TRIM65Q6PJ69 517 aa16.43■□□□□ 0.22
NHLRC3-204ENST00000473371 SRRTQ9BXP5 876 aaKnown RBP16.43■□□□□ 0.22
NHLRC3-204ENST00000473371 FOXP2O15409 715 aa16.42■□□□□ 0.22
NHLRC3-204ENST00000473371 CSB-PGBD3P0DP91 1061 aa16.42■□□□□ 0.22
NHLRC3-204ENST00000473371 PNOCQ13519 176 aa16.42■□□□□ 0.22
NHLRC3-204ENST00000473371 JMYQ8N9B5 988 aa16.42■□□□□ 0.22
NHLRC3-204ENST00000473371 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.42■□□□□ 0.22
NHLRC3-204ENST00000473371 CARD6Q9BX69 1037 aa16.42■□□□□ 0.22
NHLRC3-204ENST00000473371 ZNF213O14771 459 aa16.42■□□□□ 0.22
NHLRC3-204ENST00000473371 ZSCAN12O43309 604 aa16.42■□□□□ 0.22
NHLRC3-204ENST00000473371 ZFYP08048 801 aaPredicted RBP16.42■□□□□ 0.22
NHLRC3-204ENST00000473371 TTLL7Q6ZT98 887 aa16.42■□□□□ 0.22
NHLRC3-204ENST00000473371 FAM177A1Q8N128 213 aaPredicted RBP16.42■□□□□ 0.22
NHLRC3-204ENST00000473371 ALG1Q9BT22 464 aa16.42■□□□□ 0.22
NHLRC3-204ENST00000473371 PLA2G4AP47712 749 aa16.41■□□□□ 0.22
NHLRC3-204ENST00000473371 PTPN21Q16825 1174 aa16.41■□□□□ 0.22
NHLRC3-204ENST00000473371 VSTM4Q8IW00 320 aa16.41■□□□□ 0.22
NHLRC3-204ENST00000473371 REXO1L1PQ8IX06 675 aa16.41■□□□□ 0.22
NHLRC3-204ENST00000473371 AIFM3Q96NN9 605 aa16.41■□□□□ 0.22
NHLRC3-204ENST00000473371 TRHP20396 242 aaPredicted RBP16.41■□□□□ 0.22
NHLRC3-204ENST00000473371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.41■□□□□ 0.224e-9■■□□□ 13.2
NHLRC3-204ENST00000473371 TMEM232C9JQI7 657 aa16.41■□□□□ 0.22
NHLRC3-204ENST00000473371 TADA3O75528 432 aa16.41■□□□□ 0.22
NHLRC3-204ENST00000473371 CIAO1O76071 339 aa16.41■□□□□ 0.22
NHLRC3-204ENST00000473371 SHC4Q6S5L8 630 aa16.41■□□□□ 0.22
NHLRC3-204ENST00000473371 VPS37DQ86XT2 251 aa16.41■□□□□ 0.22
NHLRC3-204ENST00000473371 TMX1Q9H3N1 280 aa16.41■□□□□ 0.22
NHLRC3-204ENST00000473371 MEGF6O75095 1541 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 NBPF26B4DH59 902 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 CYP27B1O15528 508 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 ADORA1P30542 326 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 NBPF14Q5TI25 921 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 NBPF10Q6P3W6 841 aaKnown RBP16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 NBPF15Q8N660 670 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 CALCOCO1Q9P1Z2 691 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 HPSEQ9Y251 543 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 PPP6R2O75170 966 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 TRDNQ13061 729 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 APPBP2Q92624 585 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 PUS7LQ9H0K6 701 aaKnown RBP16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 FANCLQ9NW38 375 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 NWD2Q9ULI1 1742 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 SPEF2Q9C093 1822 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 EFCAB8A8MWE9 144 aa16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 ZRANB2O95218 330 aaKnown RBP eCLIP16.4■□□□□ 0.22
NHLRC3-204ENST00000473371 TPM1P09493 284 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms