RNA–Protein interactions for RNA: ENST00000473295.2

SCN1A-205, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 544 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-205ENST00000473295 SGO2Q562F6 1265 aa6.18□□□□□ -1.42
SCN1A-205ENST00000473295 RETREG2Q8NC44 543 aa6.18□□□□□ -1.42
SCN1A-205ENST00000473295 TMC1Q8TDI8 760 aa6.18□□□□□ -1.42
SCN1A-205ENST00000473295 ARID3AQ99856 593 aa6.18□□□□□ -1.42
SCN1A-205ENST00000473295 CORO1BQ9BR76 489 aa6.18□□□□□ -1.42
SCN1A-205ENST00000473295 METTL22Q9BUU2 404 aaPredicted RBP6.18□□□□□ -1.42
SCN1A-205ENST00000473295 TRAK1Q9UPV9 953 aa6.18□□□□□ -1.42
SCN1A-205ENST00000473295 FAM95CA0A1B0GW59 222 aa6.17□□□□□ -1.42
SCN1A-205ENST00000473295 PRR19A6NJB7 356 aa6.17□□□□□ -1.42
SCN1A-205ENST00000473295 WDR64B1ANS9 1081 aa6.17□□□□□ -1.42
SCN1A-205ENST00000473295 SPINK2P20155 84 aa6.17□□□□□ -1.42
SCN1A-205ENST00000473295 ITPKAP23677 461 aa6.17□□□□□ -1.42
SCN1A-205ENST00000473295 ALKBH8Q96BT7 664 aaKnown RBP6.17□□□□□ -1.42
SCN1A-205ENST00000473295 NRSN2Q9GZP1 204 aa6.17□□□□□ -1.42
SCN1A-205ENST00000473295 NPHS2Q9NP85 383 aa6.17□□□□□ -1.42
SCN1A-205ENST00000473295 PIM2Q9P1W9 311 aa6.17□□□□□ -1.42
SCN1A-205ENST00000473295 B3GALT4O96024 378 aa6.16□□□□□ -1.42
SCN1A-205ENST00000473295 AP3B2Q13367 1082 aa6.16□□□□□ -1.42
SCN1A-205ENST00000473295 ORC1Q13415 861 aa6.16□□□□□ -1.42
SCN1A-205ENST00000473295 NFKBIBQ15653 356 aa6.16□□□□□ -1.42
SCN1A-205ENST00000473295 ZNF423Q2M1K9 1284 aa6.16□□□□□ -1.42
SCN1A-205ENST00000473295 SPRED3Q2MJR0 410 aa6.16□□□□□ -1.42
SCN1A-205ENST00000473295 RPS26P11Q5JNZ5 115 aaPredicted RBP6.16□□□□□ -1.42
SCN1A-205ENST00000473295 USPL1Q5W0Q7 1092 aa6.16□□□□□ -1.42
SCN1A-205ENST00000473295 PRPF40BQ6NWY9 871 aaKnown RBP6.16□□□□□ -1.42
SCN1A-205ENST00000473295 DTX1Q86Y01 620 aa6.16□□□□□ -1.42
SCN1A-205ENST00000473295 EZH1Q92800 747 aaPredicted RBP6.16□□□□□ -1.42
SCN1A-205ENST00000473295 MFSD14AQ96MC6 490 aa6.16□□□□□ -1.42
SCN1A-205ENST00000473295 OSBPL1AQ9BXW6 950 aa6.16□□□□□ -1.42
SCN1A-205ENST00000473295 RBCK1Q9BYM8 510 aa6.16□□□□□ -1.42
SCN1A-205ENST00000473295 ZNF576Q9H609 170 aa6.16□□□□□ -1.42
SCN1A-205ENST00000473295 RAD18Q9NS91 495 aa6.16□□□□□ -1.42
SCN1A-205ENST00000473295 LEMD3Q9Y2U8 911 aa6.16□□□□□ -1.42
SCN1A-205ENST00000473295 EIF1AYO14602 144 aaKnown RBP6.15□□□□□ -1.42
SCN1A-205ENST00000473295 DLGAP3O95886 979 aa6.15□□□□□ -1.42
SCN1A-205ENST00000473295 WNT11O96014 354 aa6.15□□□□□ -1.42
SCN1A-205ENST00000473295 ADH5P11766 374 aa6.15□□□□□ -1.42
SCN1A-205ENST00000473295 MAOBP27338 520 aa6.15□□□□□ -1.42
SCN1A-205ENST00000473295 IRAK1P51617 712 aa6.15□□□□□ -1.42
SCN1A-205ENST00000473295 GP2P55259 537 aaKnown RBP6.15□□□□□ -1.42
SCN1A-205ENST00000473295 MAP7Q14244 749 aa6.15□□□□□ -1.42
SCN1A-205ENST00000473295 C2CD4AQ8NCU7 369 aaPredicted RBP6.15□□□□□ -1.42
SCN1A-205ENST00000473295 CCDC74AQ96AQ1 378 aa6.15□□□□□ -1.42
SCN1A-205ENST00000473295 PPP4R2Q9NY27 417 aa6.15□□□□□ -1.42
SCN1A-205ENST00000473295 SYNGAP1Q96PV0 1343 aa6.15□□□□□ -1.43
SCN1A-205ENST00000473295 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-205ENST00000473295 GPR182O15218 404 aa6.14□□□□□ -1.43
SCN1A-205ENST00000473295 GADD45BO75293 160 aaPredicted RBP6.14□□□□□ -1.43
SCN1A-205ENST00000473295 MED26O95402 600 aa6.14□□□□□ -1.43
SCN1A-205ENST00000473295 DRD2P14416 443 aa6.14□□□□□ -1.43
SCN1A-205ENST00000473295 MCTP1Q6DN14 999 aa6.14□□□□□ -1.43
SCN1A-205ENST00000473295 CDPF1Q6NVV7 123 aa6.14□□□□□ -1.43
SCN1A-205ENST00000473295 FBLIM1Q8WUP2 373 aa6.14□□□□□ -1.43
SCN1A-205ENST00000473295 NIF3L1Q9GZT8 377 aa6.14□□□□□ -1.43
SCN1A-205ENST00000473295 F13BP05160 661 aa6.13□□□□□ -1.43
SCN1A-205ENST00000473295 CYP27A1Q02318 531 aa6.13□□□□□ -1.43
SCN1A-205ENST00000473295 FBXL6Q8N531 539 aa6.13□□□□□ -1.43
SCN1A-205ENST00000473295 TBC1D32Q96NH3 1257 aa6.13□□□□□ -1.43
SCN1A-205ENST00000473295 CSRNP1Q96S65 589 aa6.13□□□□□ -1.43
SCN1A-205ENST00000473295 ABCB6Q9NP58 842 aa6.13□□□□□ -1.43
SCN1A-205ENST00000473295 COL17A1Q9UMD9 1497 aaPredicted RBP6.13□□□□□ -1.43
SCN1A-205ENST00000473295 TMEM238LA0A1B0GVL6 79 aa6.12□□□□□ -1.43
SCN1A-205ENST00000473295 SOWAHDA6NJG2 315 aa6.12□□□□□ -1.43
SCN1A-205ENST00000473295 SUPT5HO00267 1087 aaKnown RBP6.12□□□□□ -1.43
SCN1A-205ENST00000473295 BRD1O95696 1058 aa6.12□□□□□ -1.43
SCN1A-205ENST00000473295 IGHA2P01877 340 aa6.12□□□□□ -1.43
SCN1A-205ENST00000473295 FOSL1P15407 271 aa6.12□□□□□ -1.43
SCN1A-205ENST00000473295 PDE3AQ14432 1141 aa6.12□□□□□ -1.43
SCN1A-205ENST00000473295 AKAP4Q5JQC9 854 aa6.12□□□□□ -1.43
SCN1A-205ENST00000473295 DYMQ7RTS9 669 aa6.12□□□□□ -1.43
SCN1A-205ENST00000473295 ZAR1Q86SH2 424 aa6.12□□□□□ -1.43
SCN1A-205ENST00000473295 TRIM56Q9BRZ2 755 aaKnown RBP6.12□□□□□ -1.43
SCN1A-205ENST00000473295 NLRP2Q9NX02 1062 aa6.12□□□□□ -1.43
SCN1A-205ENST00000473295 AP4E1Q9UPM8 1137 aa6.12□□□□□ -1.43
SCN1A-205ENST00000473295 GNEQ9Y223 722 aaKnown RBP6.12□□□□□ -1.43
SCN1A-205ENST00000473295 ACTL7BQ9Y614 415 aa6.12□□□□□ -1.43
SCN1A-205ENST00000473295 PAX4O43316 350 aa6.11□□□□□ -1.43
SCN1A-205ENST00000473295 XRCC5P13010 732 aaKnown RBP6.11□□□□□ -1.43
SCN1A-205ENST00000473295 GSX1Q9H4S2 264 aaPredicted RBP6.11□□□□□ -1.43
SCN1A-205ENST00000473295 PRKAG2Q9UGJ0 569 aa6.11□□□□□ -1.43
SCN1A-205ENST00000473295 DCTN4Q9UJW0 460 aa6.11□□□□□ -1.43
SCN1A-205ENST00000473295 ANGEL1Q9UNK9 670 aaKnown RBP6.11□□□□□ -1.43
SCN1A-205ENST00000473295 AOC2O75106 756 aa6.1□□□□□ -1.43
SCN1A-205ENST00000473295 CTSBP07858 339 aa6.1□□□□□ -1.43
SCN1A-205ENST00000473295 RAB6AP20340 208 aa6.1□□□□□ -1.43
SCN1A-205ENST00000473295 ASPAP45381 313 aa6.1□□□□□ -1.43
SCN1A-205ENST00000473295 PPP2R3AQ06190 1150 aa6.1□□□□□ -1.43
SCN1A-205ENST00000473295 DUSP27Q5VZP5 1158 aa6.1□□□□□ -1.43
SCN1A-205ENST00000473295 ACSS3Q9H6R3 686 aa6.1□□□□□ -1.43
SCN1A-205ENST00000473295 BIN2Q9UBW5 565 aaPredicted RBP6.1□□□□□ -1.43
SCN1A-205ENST00000473295 OAS3Q9Y6K5 1087 aaKnown RBP6.1□□□□□ -1.43
SCN1A-205ENST00000473295 CYP26A1O43174 497 aa6.09□□□□□ -1.43
SCN1A-205ENST00000473295 NFICP08651 508 aa6.09□□□□□ -1.43
SCN1A-205ENST00000473295 SLFN14P0C7P3 912 aa6.09□□□□□ -1.43
SCN1A-205ENST00000473295 GRM2Q14416 872 aa6.09□□□□□ -1.43
SCN1A-205ENST00000473295 MSMPQ1L6U9 139 aa6.09□□□□□ -1.43
SCN1A-205ENST00000473295 DTHD1Q6ZMT9 781 aa6.09□□□□□ -1.43
SCN1A-205ENST00000473295 VSIG10LQ86VR7 867 aa6.09□□□□□ -1.43
SCN1A-205ENST00000473295 GLIS3Q8NEA6 775 aa6.09□□□□□ -1.43
SCN1A-205ENST00000473295 WDR18Q9BV38 432 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms