RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 IGSF3O75054 1194 aa24.53■■□□□ 1.52
COL18A1-207ENST00000473212 EVCP57679 992 aa24.53■■□□□ 1.52
COL18A1-207ENST00000473212 ASAP1Q9ULH1 1129 aa24.53■■□□□ 1.52
COL18A1-207ENST00000473212 UBE2Q2LH0YL09 131 aa24.53■■□□□ 1.52
COL18A1-207ENST00000473212 ZRSR1Q15695 479 aaKnown RBP24.53■■□□□ 1.52
COL18A1-207ENST00000473212 FBXO18Q8NFZ0 1043 aa24.53■■□□□ 1.52
COL18A1-207ENST00000473212 CHMP4CQ96CF2 233 aa24.53■■□□□ 1.52
COL18A1-207ENST00000473212 CPDO75976 1380 aa24.52■■□□□ 1.52
COL18A1-207ENST00000473212 GSDMDP57764 484 aa24.52■■□□□ 1.52
COL18A1-207ENST00000473212 HLFQ16534 295 aa24.52■■□□□ 1.52
COL18A1-207ENST00000473212 MARCKSP29966 332 aaPredicted RBP24.52■■□□□ 1.52
COL18A1-207ENST00000473212 ATG3Q9NT62 314 aa24.52■■□□□ 1.52
COL18A1-207ENST00000473212 SMC2O95347 1197 aa24.51■■□□□ 1.51
COL18A1-207ENST00000473212 MYSM1Q5VVJ2 828 aa24.51■■□□□ 1.51
COL18A1-207ENST00000473212 TICAM2Q86XR7 235 aa24.51■■□□□ 1.51
COL18A1-207ENST00000473212 TBC1D10CQ8IV04 446 aa24.51■■□□□ 1.51
COL18A1-207ENST00000473212 KCNG4Q8TDN1 519 aa24.51■■□□□ 1.51
COL18A1-207ENST00000473212 APPBP2Q92624 585 aa24.51■■□□□ 1.51
COL18A1-207ENST00000473212 OSBPL5Q9H0X9 879 aaPredicted RBP24.51■■□□□ 1.51
COL18A1-207ENST00000473212 GREM2Q9H772 168 aa24.51■■□□□ 1.51
COL18A1-207ENST00000473212 DDX41Q9UJV9 622 aaKnown RBP24.51■■□□□ 1.51
COL18A1-207ENST00000473212 PARP4Q9UKK3 1724 aaKnown RBP24.51■■□□□ 1.51
COL18A1-207ENST00000473212 MYO5AQ9Y4I1 1855 aaKnown RBP24.51■■□□□ 1.51
COL18A1-207ENST00000473212 SPTLC2O15270 562 aa24.51■■□□□ 1.51
COL18A1-207ENST00000473212 FBXL16Q8N461 479 aa24.51■■□□□ 1.51
COL18A1-207ENST00000473212 SYTL4Q96C24 671 aaPredicted RBP24.51■■□□□ 1.51
COL18A1-207ENST00000473212 XPO4Q9C0E2 1151 aaKnown RBP24.51■■□□□ 1.51
COL18A1-207ENST00000473212 MROH7-TTC4A0A0A0MT08 1334 aa24.5■■□□□ 1.51
COL18A1-207ENST00000473212 CYB5R4Q7L1T6 521 aa24.5■■□□□ 1.51
COL18A1-207ENST00000473212 CADPS2Q86UW7 1296 aa24.5■■□□□ 1.51
COL18A1-207ENST00000473212 KIF18AQ8NI77 898 aa24.5■■□□□ 1.51
COL18A1-207ENST00000473212 IFNKQ9P0W0 207 aa24.5■■□□□ 1.51
COL18A1-207ENST00000473212 KAT6BQ8WYB5 2073 aa24.5■■□□□ 1.51
COL18A1-207ENST00000473212 CPLX1O14810 134 aa24.5■■□□□ 1.51
COL18A1-207ENST00000473212 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.5■■□□□ 1.51
COL18A1-207ENST00000473212 POLR3EQ9NVU0 708 aa24.5■■□□□ 1.51
COL18A1-207ENST00000473212 RIC1Q4ADV7 1423 aa24.49■■□□□ 1.51
COL18A1-207ENST00000473212 ZNF213O14771 459 aa24.49■■□□□ 1.51
COL18A1-207ENST00000473212 WDHD1O75717 1129 aaPredicted RBP24.49■■□□□ 1.51
COL18A1-207ENST00000473212 IL2RBP14784 551 aa24.49■■□□□ 1.51
COL18A1-207ENST00000473212 IFIT5Q13325 482 aaKnown RBP24.49■■□□□ 1.51
COL18A1-207ENST00000473212 BRINP3Q76B58 766 aa24.49■■□□□ 1.51
COL18A1-207ENST00000473212 TMC6Q7Z403 805 aa24.49■■□□□ 1.51
COL18A1-207ENST00000473212 RALYLQ86SE5 291 aaKnown RBP24.49■■□□□ 1.51
COL18A1-207ENST00000473212 NCOA7Q8NI08 942 aa24.49■■□□□ 1.51
COL18A1-207ENST00000473212 IMPACTQ9P2X3 320 aa24.49■■□□□ 1.51
COL18A1-207ENST00000473212 YEATS4O95619 227 aa24.49■■□□□ 1.51
COL18A1-207ENST00000473212 METTL24Q5JXM2 366 aa24.49■■□□□ 1.51
COL18A1-207ENST00000473212 PHKBQ93100 1093 aa24.49■■□□□ 1.51
COL18A1-207ENST00000473212 ZNF202O95125 648 aa24.48■■□□□ 1.51
COL18A1-207ENST00000473212 SLC3A2P08195 630 aaKnown RBP24.48■■□□□ 1.51
COL18A1-207ENST00000473212 KIF23Q02241 960 aaPredicted RBP24.48■■□□□ 1.51
COL18A1-207ENST00000473212 MYL10Q9BUA6 226 aa24.48■■□□□ 1.51
COL18A1-207ENST00000473212 KCND1Q9NSA2 647 aa24.48■■□□□ 1.51
COL18A1-207ENST00000473212 SNAP23O00161 211 aa24.48■■□□□ 1.51
COL18A1-207ENST00000473212 KMT5BQ4FZB7 885 aa24.48■■□□□ 1.51
COL18A1-207ENST00000473212 BPIFA3Q9BQP9 254 aa24.48■■□□□ 1.51
COL18A1-207ENST00000473212 PIH1D3Q9NQM4 214 aaKnown RBP24.48■■□□□ 1.51
COL18A1-207ENST00000473212 AKAP2Q9Y2D5 859 aa24.48■■□□□ 1.51
COL18A1-207ENST00000473212 HSPA2P54652 639 aa24.47■■□□□ 1.51
COL18A1-207ENST00000473212 AXDND1Q5T1B0 1012 aaPredicted RBP24.47■■□□□ 1.51
COL18A1-207ENST00000473212 SLC9C2Q5TAH2 1124 aa24.47■■□□□ 1.51
COL18A1-207ENST00000473212 E4F1Q66K89 784 aaPredicted RBP24.47■■□□□ 1.51
COL18A1-207ENST00000473212 ARMCX5Q6P1M9 558 aa24.47■■□□□ 1.51
COL18A1-207ENST00000473212 DHX16O60231 1041 aaKnown RBP24.46■■□□□ 1.51
COL18A1-207ENST00000473212 IDH1O75874 414 aaKnown RBP24.46■■□□□ 1.51
COL18A1-207ENST00000473212 COL5A2P05997 1499 aaPredicted RBP24.46■■□□□ 1.51
COL18A1-207ENST00000473212 ITGA6P23229 1130 aa24.46■■□□□ 1.51
COL18A1-207ENST00000473212 NKX1-1Q15270 411 aaPredicted RBP24.46■■□□□ 1.51
COL18A1-207ENST00000473212 PTPN21Q16825 1174 aa24.46■■□□□ 1.51
COL18A1-207ENST00000473212 LDHAL6AQ6ZMR3 332 aa24.46■■□□□ 1.51
COL18A1-207ENST00000473212 SYNE3Q6ZMZ3 975 aa24.46■■□□□ 1.51
COL18A1-207ENST00000473212 ZNF397Q8NF99 534 aaPredicted RBP24.46■■□□□ 1.51
COL18A1-207ENST00000473212 ERO1AQ96HE7 468 aa24.46■■□□□ 1.51
COL18A1-207ENST00000473212 RIPOR2Q9Y4F9 1068 aa24.46■■□□□ 1.51
COL18A1-207ENST00000473212 SPEF2Q9C093 1822 aa24.46■■□□□ 1.51
COL18A1-207ENST00000473212 CDC27P30260 824 aa24.46■■□□□ 1.51
COL18A1-207ENST00000473212 ELF2Q15723 593 aa24.46■■□□□ 1.51
COL18A1-207ENST00000473212 HELBQ8NG08 1087 aaPredicted RBP24.46■■□□□ 1.51
COL18A1-207ENST00000473212 APPP05067 770 aa24.45■■□□□ 1.51
COL18A1-207ENST00000473212 PCCAP05165 728 aaPredicted RBP24.45■■□□□ 1.51
COL18A1-207ENST00000473212 CSF1RP07333 972 aa24.45■■□□□ 1.51
COL18A1-207ENST00000473212 PFKFB1P16118 471 aa24.45■■□□□ 1.51
COL18A1-207ENST00000473212 NLRP12P59046 1061 aa24.45■■□□□ 1.51
COL18A1-207ENST00000473212 BRAPQ7Z569 592 aa24.45■■□□□ 1.51
COL18A1-207ENST00000473212 TNS2Q63HR2 1409 aa24.45■■□□□ 1.5
COL18A1-207ENST00000473212 B4E1Z4 1266 aa24.45■■□□□ 1.5
COL18A1-207ENST00000473212 KIF20AO95235 890 aa24.45■■□□□ 1.5
COL18A1-207ENST00000473212 ZFYP08048 801 aaPredicted RBP24.45■■□□□ 1.5
COL18A1-207ENST00000473212 ANO1Q5XXA6 986 aa24.45■■□□□ 1.5
COL18A1-207ENST00000473212 TMOD3Q9NYL9 352 aa24.45■■□□□ 1.5
COL18A1-207ENST00000473212 MORC2Q9Y6X9 1032 aaPredicted RBP24.45■■□□□ 1.5
COL18A1-207ENST00000473212 AKAP11Q9UKA4 1901 aa24.45■■□□□ 1.5
COL18A1-207ENST00000473212 SLU7O95391 586 aaKnown RBP24.44■■□□□ 1.5
COL18A1-207ENST00000473212 MICU3Q86XE3 530 aa24.44■■□□□ 1.5
COL18A1-207ENST00000473212 ZBTB38Q8NAP3 1195 aaPredicted RBP24.44■■□□□ 1.5
COL18A1-207ENST00000473212 PIGBQ92521 554 aa24.44■■□□□ 1.5
COL18A1-207ENST00000473212 PPP1R13BQ96KQ4 1090 aa24.44■■□□□ 1.5
COL18A1-207ENST00000473212 WWC3Q9ULE0 1092 aa24.44■■□□□ 1.5
COL18A1-207ENST00000473212 PHKA1P46020 1223 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms