RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 FAM217BQ9NTX9 383 aaPredicted RBP8.09□□□□□ -1.11
HDAC1-205ENST00000472928 POLLQ9UGP5 575 aa8.09□□□□□ -1.11
HDAC1-205ENST00000472928 LHX6Q9UPM6 363 aa8.09□□□□□ -1.11
HDAC1-205ENST00000472928 GPR25O00155 361 aa8.08□□□□□ -1.12
HDAC1-205ENST00000472928 ANXA1P04083 346 aa8.08□□□□□ -1.12
HDAC1-205ENST00000472928 VIL1P09327 827 aaKnown RBP8.08□□□□□ -1.12
HDAC1-205ENST00000472928 ZNF280AP59817 542 aaPredicted RBP8.08□□□□□ -1.12
HDAC1-205ENST00000472928 GPSM2P81274 684 aa8.08□□□□□ -1.12
HDAC1-205ENST00000472928 KRT24Q2M2I5 525 aa8.08□□□□□ -1.12
HDAC1-205ENST00000472928 TWISTNBQ3B726 338 aaPredicted RBP8.08□□□□□ -1.12
HDAC1-205ENST00000472928 SH3D19Q5HYK7 790 aa8.08□□□□□ -1.12
HDAC1-205ENST00000472928 ANGEL2Q5VTE6 544 aaKnown RBP8.08□□□□□ -1.12
HDAC1-205ENST00000472928 TSPYL6Q8N831 410 aa8.08□□□□□ -1.12
HDAC1-205ENST00000472928 CELF1Q92879 486 aaKnown RBP8.08□□□□□ -1.12
HDAC1-205ENST00000472928 ZNF609O15014 1411 aa8.08□□□□□ -1.12
HDAC1-205ENST00000472928 SH3TC1Q8TE82 1336 aa8.07□□□□□ -1.12
HDAC1-205ENST00000472928 KIF16BQ96L93 1317 aa8.07□□□□□ -1.12
HDAC1-205ENST00000472928 ELL2O00472 640 aaPredicted RBP8.07□□□□□ -1.12
HDAC1-205ENST00000472928 TM4SF4P48230 202 aa8.07□□□□□ -1.12
HDAC1-205ENST00000472928 SCARF1Q14162 830 aa8.07□□□□□ -1.12
HDAC1-205ENST00000472928 PPP4R3BQ5MIZ7 849 aa8.07□□□□□ -1.12
HDAC1-205ENST00000472928 C8orf58Q8NAV2 365 aa8.07□□□□□ -1.12
HDAC1-205ENST00000472928 TBC1D16Q8TBP0 767 aa8.07□□□□□ -1.12
HDAC1-205ENST00000472928 SSH1Q8WYL5 1049 aa8.07□□□□□ -1.12
HDAC1-205ENST00000472928 PCMTD1Q96MG8 357 aaPredicted RBP8.07□□□□□ -1.12
HDAC1-205ENST00000472928 CFHR5Q9BXR6 569 aa8.07□□□□□ -1.12
HDAC1-205ENST00000472928 NSFL1CQ9UNZ2 370 aaKnown RBP8.07□□□□□ -1.12
HDAC1-205ENST00000472928 UBE2Q2LH0YL09 131 aa8.06□□□□□ -1.12
HDAC1-205ENST00000472928 C6orf229H3BNL8 230 aa8.06□□□□□ -1.12
HDAC1-205ENST00000472928 FKTNO75072 461 aa8.06□□□□□ -1.12
HDAC1-205ENST00000472928 COL9A1P20849 921 aa8.06□□□□□ -1.12
HDAC1-205ENST00000472928 TCIRG1Q13488 830 aa8.06□□□□□ -1.12
HDAC1-205ENST00000472928 SF3B3Q15393 1217 aaKnown RBP8.06□□□□□ -1.12
HDAC1-205ENST00000472928 HSP90AB3PQ58FF7 597 aa8.06□□□□□ -1.12
HDAC1-205ENST00000472928 FRAT1Q92837 279 aaPredicted RBP8.06□□□□□ -1.12
HDAC1-205ENST00000472928 ZNF428Q96B54 188 aa8.06□□□□□ -1.12
HDAC1-205ENST00000472928 GMLQ99445 158 aa8.06□□□□□ -1.12
HDAC1-205ENST00000472928 BABAM1Q9NWV8 329 aa8.06□□□□□ -1.12
HDAC1-205ENST00000472928 FAM198AQ9UFP1 575 aa8.06□□□□□ -1.12
HDAC1-205ENST00000472928 TRMT112Q9UI30 125 aaKnown RBP8.06□□□□□ -1.12
HDAC1-205ENST00000472928 SCAF8Q9UPN6 1271 aaKnown RBP8.06□□□□□ -1.12
HDAC1-205ENST00000472928 DDX60Q8IY21 1712 aaKnown RBP8.06□□□□□ -1.12
HDAC1-205ENST00000472928 PITPNM2Q9BZ72 1349 aa8.05□□□□□ -1.12
HDAC1-205ENST00000472928 VAMP4O75379 141 aa8.05□□□□□ -1.12
HDAC1-205ENST00000472928 EIF2S2P20042 333 aaKnown RBP8.05□□□□□ -1.12
HDAC1-205ENST00000472928 ALDH1L2Q3SY69 923 aa8.05□□□□□ -1.12
HDAC1-205ENST00000472928 C20orf194Q5TEA3 1177 aa8.05□□□□□ -1.12
HDAC1-205ENST00000472928 PRAMEF18Q5VWM3 479 aa8.05□□□□□ -1.12
HDAC1-205ENST00000472928 RSBN1LQ6PCB5 846 aaPredicted RBP8.05□□□□□ -1.12
HDAC1-205ENST00000472928 COPS6Q7L5N1 327 aa8.05□□□□□ -1.12
HDAC1-205ENST00000472928 AGBL3Q8NEM8 1001 aa8.05□□□□□ -1.12
HDAC1-205ENST00000472928 XAGE3Q8WTP9 111 aa8.05□□□□□ -1.12
HDAC1-205ENST00000472928 CRBNQ96SW2 442 aa8.05□□□□□ -1.12
HDAC1-205ENST00000472928 EYA3Q99504 573 aa8.05□□□□□ -1.12
HDAC1-205ENST00000472928 ZMYND15Q9H091 742 aa8.05□□□□□ -1.12
HDAC1-205ENST00000472928 ERICH6BQ5W0A0 696 aa8.04□□□□□ -1.12
HDAC1-205ENST00000472928 OTOP1Q7RTM1 612 aa8.04□□□□□ -1.12
HDAC1-205ENST00000472928 FTSJ3Q8IY81 847 aaKnown RBP8.04□□□□□ -1.12
HDAC1-205ENST00000472928 EXOC6Q8TAG9 804 aa8.04□□□□□ -1.12
HDAC1-205ENST00000472928 MYOZ2Q9NPC6 264 aa8.04□□□□□ -1.12
HDAC1-205ENST00000472928 PODXL2Q9NZ53 605 aa8.04□□□□□ -1.12
HDAC1-205ENST00000472928 TNNQ9UQP3 1299 aa8.04□□□□□ -1.12
HDAC1-205ENST00000472928 PPP1R3GB7ZBB8 358 aa8.03□□□□□ -1.12
HDAC1-205ENST00000472928 UFL1O94874 794 aa8.03□□□□□ -1.12
HDAC1-205ENST00000472928 USP17L8P0C7I0 530 aa8.03□□□□□ -1.12
HDAC1-205ENST00000472928 HOXB1P14653 301 aaPredicted RBP8.03□□□□□ -1.12
HDAC1-205ENST00000472928 PTPN12Q05209 780 aaKnown RBP8.03□□□□□ -1.12
HDAC1-205ENST00000472928 SREBF2Q12772 1141 aa8.03□□□□□ -1.12
HDAC1-205ENST00000472928 AIMP1Q12904 312 aaKnown RBP8.03□□□□□ -1.12
HDAC1-205ENST00000472928 NBPF9Q3BBW0 867 aa8.03□□□□□ -1.12
HDAC1-205ENST00000472928 ZKSCAN2Q63HK3 967 aa8.03□□□□□ -1.12
HDAC1-205ENST00000472928 INTS3Q68E01 1043 aaKnown RBP8.03□□□□□ -1.12
HDAC1-205ENST00000472928 MRPL50Q8N5N7 158 aaKnown RBP8.03□□□□□ -1.12
HDAC1-205ENST00000472928 PANK1Q8TE04 598 aa8.03□□□□□ -1.12
HDAC1-205ENST00000472928 NECTIN2Q92692 538 aa8.03□□□□□ -1.12
HDAC1-205ENST00000472928 ARMC5Q96C12 935 aa8.03□□□□□ -1.12
HDAC1-205ENST00000472928 FAM89AQ96GI7 184 aa8.03□□□□□ -1.12
HDAC1-205ENST00000472928 ISCA1Q9BUE6 129 aa8.03□□□□□ -1.12
HDAC1-205ENST00000472928 ZC3H12CQ9C0D7 883 aaKnown RBP8.03□□□□□ -1.12
HDAC1-205ENST00000472928 LAMA3Q16787 3333 aa8.03□□□□□ -1.12
HDAC1-205ENST00000472928 COL6A3P12111 3177 aa8.03□□□□□ -1.12
HDAC1-205ENST00000472928 PSME4Q14997 1843 aa8.03□□□□□ -1.12
HDAC1-205ENST00000472928 RBBP6Q7Z6E9 1792 aaKnown RBP8.02□□□□□ -1.13
HDAC1-205ENST00000472928 RLBP1P12271 317 aa8.02□□□□□ -1.13
HDAC1-205ENST00000472928 TRIM27P14373 513 aa8.02□□□□□ -1.13
HDAC1-205ENST00000472928 EN2P19622 333 aaPredicted RBP8.02□□□□□ -1.13
HDAC1-205ENST00000472928 RPS8P62241 208 aaKnown RBP8.02□□□□□ -1.13
HDAC1-205ENST00000472928 CAP1Q01518 475 aa8.02□□□□□ -1.13
HDAC1-205ENST00000472928 FLIIQ13045 1269 aa8.02□□□□□ -1.13
HDAC1-205ENST00000472928 SKIV2LQ15477 1246 aaKnown RBP8.02□□□□□ -1.13
HDAC1-205ENST00000472928 LDLRAD1Q5T700 205 aa8.02□□□□□ -1.13
HDAC1-205ENST00000472928 HDGFL1Q5TGJ6 251 aa8.02□□□□□ -1.13
HDAC1-205ENST00000472928 SPRYD7Q5W111 196 aa8.02□□□□□ -1.13
HDAC1-205ENST00000472928 STK31Q9BXU1 1019 aa8.02□□□□□ -1.13
HDAC1-205ENST00000472928 PPP4R2Q9NY27 417 aa8.02□□□□□ -1.13
HDAC1-205ENST00000472928 NOB1Q9ULX3 412 aaKnown RBP8.02□□□□□ -1.13
HDAC1-205ENST00000472928 TRIM17Q9Y577 477 aa8.02□□□□□ -1.13
HDAC1-205ENST00000472928 SNPHO15079 494 aa8.01□□□□□ -1.13
HDAC1-205ENST00000472928 IPO8O15397 1037 aaKnown RBP8.01□□□□□ -1.13
HDAC1-205ENST00000472928 HOXB7P09629 217 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms