RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 ADGRF5Q8IZF2 1346 aa5.1□□□□□ -1.59
XRN1-209ENST00000472625 PARD3Q8TEW0 1356 aa5.1□□□□□ -1.59
XRN1-209ENST00000472625 MPHOSPH9Q99550 1183 aa5.1□□□□□ -1.59
XRN1-209ENST00000472625 SLC30A3Q99726 388 aa5.1□□□□□ -1.59
XRN1-209ENST00000472625 SAP130Q9H0E3 1048 aa5.1□□□□□ -1.59
XRN1-209ENST00000472625 C14orf93Q9H972 538 aaKnown RBP5.1□□□□□ -1.59
XRN1-209ENST00000472625 POGKQ9P215 609 aa5.1□□□□□ -1.59
XRN1-209ENST00000472625 STK26Q9P289 416 aa5.1□□□□□ -1.59
XRN1-209ENST00000472625 NWD2Q9ULI1 1742 aa5.1□□□□□ -1.59
XRN1-209ENST00000472625 CCDC9Q9Y3X0 531 aaKnown RBP5.1□□□□□ -1.59
XRN1-209ENST00000472625 IFT172Q9UG01 1749 aa5.09□□□□□ -1.59
XRN1-209ENST00000472625 MARF1Q9Y4F3 1742 aaKnown RBP5.09□□□□□ -1.59
XRN1-209ENST00000472625 TULP4Q9NRJ4 1543 aa5.09□□□□□ -1.59
XRN1-209ENST00000472625 ATP7BP35670 1465 aa5.09□□□□□ -1.59
XRN1-209ENST00000472625 KRTAP9-6A0A140TA67 174 aa5.09□□□□□ -1.59
XRN1-209ENST00000472625 RTN1Q16799 776 aa5.09□□□□□ -1.59
XRN1-209ENST00000472625 COX20Q5RI15 118 aa5.09□□□□□ -1.59
XRN1-209ENST00000472625 ZNF468Q5VIY5 522 aaPredicted RBP5.09□□□□□ -1.59
XRN1-209ENST00000472625 KRT27Q7Z3Y8 459 aa5.09□□□□□ -1.59
XRN1-209ENST00000472625 SYT9Q86SS6 491 aa5.09□□□□□ -1.59
XRN1-209ENST00000472625 KRTAP1-3Q8IUG1 177 aa5.09□□□□□ -1.59
XRN1-209ENST00000472625 NEUROD4Q9HD90 331 aa5.09□□□□□ -1.59
XRN1-209ENST00000472625 KLK14Q9P0G3 267 aa5.09□□□□□ -1.59
XRN1-209ENST00000472625 LRP5O75197 1615 aa5.08□□□□□ -1.6
XRN1-209ENST00000472625 GLI3P10071 1580 aa5.08□□□□□ -1.6
XRN1-209ENST00000472625 DISP2A7MBM2 1401 aa5.08□□□□□ -1.6
XRN1-209ENST00000472625 PLEKHH1Q9ULM0 1364 aa5.08□□□□□ -1.6
XRN1-209ENST00000472625 GNB5O14775 395 aa5.08□□□□□ -1.6
XRN1-209ENST00000472625 XPCQ01831 940 aaPredicted RBP5.08□□□□□ -1.6
XRN1-209ENST00000472625 IER5Q5VY09 327 aa5.08□□□□□ -1.6
XRN1-209ENST00000472625 WAPLQ7Z5K2 1190 aa5.08□□□□□ -1.6
XRN1-209ENST00000472625 BTLAQ7Z6A9 289 aa5.08□□□□□ -1.6
XRN1-209ENST00000472625 COL26A1Q96A83 441 aa5.08□□□□□ -1.6
XRN1-209ENST00000472625 TRIM11Q96F44 468 aa5.08□□□□□ -1.6
XRN1-209ENST00000472625 PRAM1Q96QH2 718 aa5.08□□□□□ -1.6
XRN1-209ENST00000472625 COL14A1Q05707 1796 aaKnown RBP5.07□□□□□ -1.6
XRN1-209ENST00000472625 OPLAHO14841 1288 aa5.07□□□□□ -1.6
XRN1-209ENST00000472625 INPP5BP32019 993 aa5.07□□□□□ -1.6
XRN1-209ENST00000472625 CHRNA4P43681 627 aa5.07□□□□□ -1.6
XRN1-209ENST00000472625 LAMC2Q13753 1193 aa5.07□□□□□ -1.6
XRN1-209ENST00000472625 TMEM132EQ6IEE7 984 aa5.07□□□□□ -1.6
XRN1-209ENST00000472625 C8orf86Q6ZUL3 223 aa5.07□□□□□ -1.6
XRN1-209ENST00000472625 ETFBKMTQ8IXQ9 262 aa5.07□□□□□ -1.6
XRN1-209ENST00000472625 CEP63Q96MT8 703 aa5.07□□□□□ -1.6
XRN1-209ENST00000472625 BRD7Q9NPI1 651 aa5.07□□□□□ -1.6
XRN1-209ENST00000472625 PLCH1Q4KWH8 1693 aa5.07□□□□□ -1.6
XRN1-209ENST00000472625 BRD4O60885 1362 aaPredicted RBP5.06□□□□□ -1.6
XRN1-209ENST00000472625 C1QTNF9BB2RNN3 333 aa5.06□□□□□ -1.6
XRN1-209ENST00000472625 FAM229AH3BQW9 127 aa5.06□□□□□ -1.6
XRN1-209ENST00000472625 TGFBR3LH3BV60 316 aa5.06□□□□□ -1.6
XRN1-209ENST00000472625 ADAM23O75077 832 aa5.06□□□□□ -1.6
XRN1-209ENST00000472625 FURINP09958 794 aa5.06□□□□□ -1.6
XRN1-209ENST00000472625 TBC1D8BQ0IIM8 1120 aa5.06□□□□□ -1.6
XRN1-209ENST00000472625 SPEM2Q0P670 501 aa5.06□□□□□ -1.6
XRN1-209ENST00000472625 DGKZQ13574 1117 aa5.06□□□□□ -1.6
XRN1-209ENST00000472625 COL9A3Q14050 684 aaPredicted RBP5.06□□□□□ -1.6
XRN1-209ENST00000472625 NGDNQ8NEJ9 315 aaKnown RBP5.06□□□□□ -1.6
XRN1-209ENST00000472625 PRDM11Q9NQV5 511 aa5.06□□□□□ -1.6
XRN1-209ENST00000472625 BTG4Q9NY30 223 aa5.06□□□□□ -1.6
XRN1-209ENST00000472625 SEPT3Q9UH03 358 aa5.06□□□□□ -1.6
XRN1-209ENST00000472625 CHMP3Q9Y3E7 222 aa5.06□□□□□ -1.6
XRN1-209ENST00000472625 RBM19Q9Y4C8 960 aaKnown RBP5.06□□□□□ -1.6
XRN1-209ENST00000472625 ADGRB1O14514 1584 aa5.06□□□□□ -1.6
XRN1-209ENST00000472625 ITSN1Q15811 1721 aa5.06□□□□□ -1.6
XRN1-209ENST00000472625 ALBP02768 609 aa5.05□□□□□ -1.6
XRN1-209ENST00000472625 SSFA2P28290 1259 aa5.05□□□□□ -1.6
XRN1-209ENST00000472625 FAM196AQ6ZSG2 479 aa5.05□□□□□ -1.6
XRN1-209ENST00000472625 CD163Q86VB7 1156 aa5.05□□□□□ -1.6
XRN1-209ENST00000472625 PLVAPQ9BX97 442 aa5.05□□□□□ -1.6
XRN1-209ENST00000472625 AVENQ9NQS1 362 aaPredicted RBP5.05□□□□□ -1.6
XRN1-209ENST00000472625 KCNMB2Q9Y691 235 aa5.05□□□□□ -1.6
XRN1-209ENST00000472625 RGPD1P0DJD0 1748 aa5.05□□□□□ -1.6
XRN1-209ENST00000472625 ABCA3Q99758 1704 aa5.05□□□□□ -1.6
XRN1-209ENST00000472625 RAB3GAP2Q9H2M9 1393 aa5.04□□□□□ -1.6
XRN1-209ENST00000472625 SPATA31A5Q5VU36 1347 aa5.04□□□□□ -1.6
XRN1-209ENST00000472625 SPATA31A7Q8IWB4 1347 aa5.04□□□□□ -1.6
XRN1-209ENST00000472625 ELOA3CA0A087WX78 387 aaPredicted RBP5.04□□□□□ -1.6
XRN1-209ENST00000472625 ELOA3DA6NLF2 546 aaPredicted RBP5.04□□□□□ -1.6
XRN1-209ENST00000472625 ZBTB39O15060 712 aa5.04□□□□□ -1.6
XRN1-209ENST00000472625 SAFB2Q14151 953 aaKnown RBP eCLIP5.04□□□□□ -1.6
XRN1-209ENST00000472625 ECM1Q16610 540 aa5.04□□□□□ -1.6
XRN1-209ENST00000472625 ELOA3BQ3SY89 546 aa5.04□□□□□ -1.6
XRN1-209ENST00000472625 ELOA3Q8NG57 546 aa5.04□□□□□ -1.6
XRN1-209ENST00000472625 PMFBP1Q8TBY8 1022 aa5.04□□□□□ -1.6
XRN1-209ENST00000472625 TNFRSF25Q93038 417 aa5.04□□□□□ -1.6
XRN1-209ENST00000472625 BHMTQ93088 406 aa5.04□□□□□ -1.6
XRN1-209ENST00000472625 MKNK1Q9BUB5 465 aa5.04□□□□□ -1.6
XRN1-209ENST00000472625 GSX2Q9BZM3 304 aa5.04□□□□□ -1.6
XRN1-209ENST00000472625 IGFLR1Q9H665 355 aa5.04□□□□□ -1.6
XRN1-209ENST00000472625 ZFATQ9P243 1243 aa5.04□□□□□ -1.6
XRN1-209ENST00000472625 TRAK1Q9UPV9 953 aa5.04□□□□□ -1.6
XRN1-209ENST00000472625 THRAP3Q9Y2W1 955 aaKnown RBP5.04□□□□□ -1.6
XRN1-209ENST00000472625 STARD13Q9Y3M8 1113 aa5.04□□□□□ -1.6
XRN1-209ENST00000472625 CPDO75976 1380 aa5.04□□□□□ -1.6
XRN1-209ENST00000472625 NRAPQ86VF7 1730 aa5.03□□□□□ -1.6
XRN1-209ENST00000472625 ALS2Q96Q42 1657 aa5.03□□□□□ -1.6
XRN1-209ENST00000472625 THSD7AQ9UPZ6 1657 aa5.03□□□□□ -1.6
XRN1-209ENST00000472625 FAM83GA6ND36 823 aa5.03□□□□□ -1.6
XRN1-209ENST00000472625 M0R082 166 aa5.03□□□□□ -1.6
XRN1-209ENST00000472625 ATP2B4P23634 1241 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms