RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 UBTFL1P0CB47 393 aaPredicted RBP17.84■□□□□ 0.45
ABCF3-209ENST00000472608 GTF2IP78347 998 aa17.84■□□□□ 0.45
ABCF3-209ENST00000472608 IFIT5Q13325 482 aaKnown RBP17.84■□□□□ 0.45
ABCF3-209ENST00000472608 ARHGEF6Q15052 776 aa17.84■□□□□ 0.45
ABCF3-209ENST00000472608 SLC9C1Q4G0N8 1177 aa17.84■□□□□ 0.45
ABCF3-209ENST00000472608 FTSJ3Q8IY81 847 aaKnown RBP17.84■□□□□ 0.45
ABCF3-209ENST00000472608 ANKRD13AQ8IZ07 590 aa17.84■□□□□ 0.45
ABCF3-209ENST00000472608 MS4A4AQ96JQ5 239 aa17.84■□□□□ 0.45
ABCF3-209ENST00000472608 TNNQ9UQP3 1299 aa17.84■□□□□ 0.45
ABCF3-209ENST00000472608 PTCH2Q9Y6C5 1203 aa17.84■□□□□ 0.45
ABCF3-209ENST00000472608 IGHMBP2P38935 993 aaKnown RBP17.83■□□□□ 0.44
ABCF3-209ENST00000472608 IREB2P48200 963 aaKnown RBP17.83■□□□□ 0.44
ABCF3-209ENST00000472608 CCDC57Q2TAC2 916 aa17.83■□□□□ 0.44
ABCF3-209ENST00000472608 NBPF12Q5TAG4 269 aaPredicted RBP17.83■□□□□ 0.44
ABCF3-209ENST00000472608 TMEM57Q8N5G2 664 aa17.83■□□□□ 0.44
ABCF3-209ENST00000472608 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.83■□□□□ 0.44
ABCF3-209ENST00000472608 BICC1Q9H694 974 aaKnown RBP17.83■□□□□ 0.44
ABCF3-209ENST00000472608 KLRK1P26718 216 aa17.82■□□□□ 0.44
ABCF3-209ENST00000472608 SLC4A8Q2Y0W8 1093 aa17.82■□□□□ 0.44
ABCF3-209ENST00000472608 CERS5Q8N5B7 392 aa17.82■□□□□ 0.44
ABCF3-209ENST00000472608 PRO3102Q9H379 93 aa17.82■□□□□ 0.44
ABCF3-209ENST00000472608 IRS2Q9Y4H2 1338 aa17.81■□□□□ 0.44
ABCF3-209ENST00000472608 SPDYE2BA6NHP3 402 aa17.81■□□□□ 0.44
ABCF3-209ENST00000472608 DLL1O00548 723 aa17.81■□□□□ 0.44
ABCF3-209ENST00000472608 SPDYE6P0CI01 402 aa17.81■□□□□ 0.44
ABCF3-209ENST00000472608 CHRDL2Q6WN34 429 aa17.81■□□□□ 0.44
ABCF3-209ENST00000472608 ANKRD44Q8N8A2 993 aa17.81■□□□□ 0.44
ABCF3-209ENST00000472608 MPHOSPH8Q99549 860 aa17.81■□□□□ 0.44
ABCF3-209ENST00000472608 MEIS3Q99687 375 aa17.81■□□□□ 0.44
ABCF3-209ENST00000472608 ANKRD2Q9GZV1 360 aa17.81■□□□□ 0.44
ABCF3-209ENST00000472608 CD209Q9NNX6 404 aa17.81■□□□□ 0.44
ABCF3-209ENST00000472608 PCDHAC2Q9Y5I4 1007 aa17.81■□□□□ 0.44
ABCF3-209ENST00000472608 COL6A3P12111 3177 aa17.81■□□□□ 0.44
ABCF3-209ENST00000472608 RLBP1P12271 317 aa17.8■□□□□ 0.44
ABCF3-209ENST00000472608 FKBP1AP62942 108 aaKnown RBP17.8■□□□□ 0.44
ABCF3-209ENST00000472608 PDE3AQ14432 1141 aa17.8■□□□□ 0.44
ABCF3-209ENST00000472608 C15orf52Q6ZUT6 534 aaKnown RBP17.8■□□□□ 0.44
ABCF3-209ENST00000472608 BRI3BPQ8WY22 251 aa17.8■□□□□ 0.44
ABCF3-209ENST00000472608 PRMT6Q96LA8 375 aaPredicted RBP17.8■□□□□ 0.44
ABCF3-209ENST00000472608 ZFYVE28Q9HCC9 887 aa17.8■□□□□ 0.44
ABCF3-209ENST00000472608 RBM27Q9P2N5 1060 aaKnown RBP17.8■□□□□ 0.44
ABCF3-209ENST00000472608 CHMP3Q9Y3E7 222 aa17.8■□□□□ 0.44
ABCF3-209ENST00000472608 MYO1BO43795 1136 aa17.79■□□□□ 0.44
ABCF3-209ENST00000472608 CFAP100Q494V2 611 aa17.79■□□□□ 0.44
ABCF3-209ENST00000472608 OPTNQ96CV9 577 aa17.79■□□□□ 0.44
ABCF3-209ENST00000472608 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.79■□□□□ 0.44
ABCF3-209ENST00000472608 CUL9Q8IWT3 2517 aa17.79■□□□□ 0.44
ABCF3-209ENST00000472608 ECM29Q5VYK3 1845 aa17.79■□□□□ 0.44
ABCF3-209ENST00000472608 CLRN2A0PK11 232 aa17.78■□□□□ 0.44
ABCF3-209ENST00000472608 ZBTB7BO15156 539 aaPredicted RBP17.78■□□□□ 0.44
ABCF3-209ENST00000472608 GNAI2P04899 355 aa17.78■□□□□ 0.44
ABCF3-209ENST00000472608 RASA3Q14644 834 aa17.78■□□□□ 0.44
ABCF3-209ENST00000472608 AOX1Q06278 1338 aa17.77■□□□□ 0.44
ABCF3-209ENST00000472608 GNRH1P01148 92 aa17.77■□□□□ 0.44
ABCF3-209ENST00000472608 MTX1Q13505 466 aa17.77■□□□□ 0.44
ABCF3-209ENST00000472608 TAF1CQ15572 869 aaPredicted RBP17.77■□□□□ 0.44
ABCF3-209ENST00000472608 TAF7LQ5H9L4 462 aa17.77■□□□□ 0.44
ABCF3-209ENST00000472608 LDHAL6AQ6ZMR3 332 aa17.77■□□□□ 0.44
ABCF3-209ENST00000472608 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.77■□□□□ 0.44
ABCF3-209ENST00000472608 ITPRIPQ8IWB1 547 aa17.77■□□□□ 0.44
ABCF3-209ENST00000472608 SLC17A8Q8NDX2 589 aa17.77■□□□□ 0.44
ABCF3-209ENST00000472608 ELP3Q9H9T3 547 aa17.77■□□□□ 0.44
ABCF3-209ENST00000472608 LRRFIP2Q9Y608 721 aaKnown RBP17.77■□□□□ 0.44
ABCF3-209ENST00000472608 LAMA3Q16787 3333 aa17.77■□□□□ 0.44
ABCF3-209ENST00000472608 IL1R1P14778 569 aa17.76■□□□□ 0.43
ABCF3-209ENST00000472608 GTF2A2P52657 109 aa17.76■□□□□ 0.43
ABCF3-209ENST00000472608 PRMT2P55345 433 aa17.76■□□□□ 0.43
ABCF3-209ENST00000472608 UBE2Q1Q7Z7E8 422 aa17.76■□□□□ 0.43
ABCF3-209ENST00000472608 FAM43AQ8N2R8 423 aa17.76■□□□□ 0.43
ABCF3-209ENST00000472608 PANK1Q8TE04 598 aa17.76■□□□□ 0.43
ABCF3-209ENST00000472608 SH3TC2Q8TF17 1288 aa17.76■□□□□ 0.43
ABCF3-209ENST00000472608 SHISA4Q96DD7 197 aa17.76■□□□□ 0.43
ABCF3-209ENST00000472608 CHMP4BQ9H444 224 aaKnown RBP17.76■□□□□ 0.43
ABCF3-209ENST00000472608 FBXO3Q9UK99 471 aa17.76■□□□□ 0.43
ABCF3-209ENST00000472608 SPEF2Q9C093 1822 aa17.76■□□□□ 0.43
ABCF3-209ENST00000472608 CCL15-CCL14A0A0B4J2E2 113 aa17.75■□□□□ 0.43
ABCF3-209ENST00000472608 PLIN1O60240 522 aa17.75■□□□□ 0.43
ABCF3-209ENST00000472608 MVPQ14764 893 aaKnown RBP17.75■□□□□ 0.43
ABCF3-209ENST00000472608 CCL15Q16663 113 aa17.75■□□□□ 0.43
ABCF3-209ENST00000472608 VEZTQ9HBM0 779 aa17.75■□□□□ 0.43
ABCF3-209ENST00000472608 ZCCHC17Q9NP64 241 aaKnown RBP17.75■□□□□ 0.43
ABCF3-209ENST00000472608 DDX19BQ9UMR2 479 aa17.75■□□□□ 0.43
ABCF3-209ENST00000472608 OTOFQ9HC10 1997 aa17.74■□□□□ 0.43
ABCF3-209ENST00000472608 TLR2O60603 784 aa17.74■□□□□ 0.43
ABCF3-209ENST00000472608 RFX5P48382 616 aaPredicted RBP17.74■□□□□ 0.43
ABCF3-209ENST00000472608 LACTBP83111 547 aaPredicted RBP17.74■□□□□ 0.43
ABCF3-209ENST00000472608 CHRNDQ07001 517 aa17.74■□□□□ 0.43
ABCF3-209ENST00000472608 CNKSR2Q8WXI2 1034 aa17.74■□□□□ 0.43
ABCF3-209ENST00000472608 ZNF594Q96JF6 807 aaPredicted RBP17.74■□□□□ 0.43
ABCF3-209ENST00000472608 TEPSINQ96N21 525 aa17.74■□□□□ 0.43
ABCF3-209ENST00000472608 CNNM1Q9NRU3 951 aa17.74■□□□□ 0.43
ABCF3-209ENST00000472608 RIPOR2Q9Y4F9 1068 aa17.74■□□□□ 0.43
ABCF3-209ENST00000472608 MAP3K9P80192 1104 aa17.73■□□□□ 0.43
ABCF3-209ENST00000472608 TNFAIP1Q13829 316 aa17.73■□□□□ 0.43
ABCF3-209ENST00000472608 SPDYE2Q495Y8 402 aa17.73■□□□□ 0.43
ABCF3-209ENST00000472608 ARHGAP39Q9C0H5 1083 aa17.73■□□□□ 0.43
ABCF3-209ENST00000472608 F8W031 263 aaPredicted RBP17.72■□□□□ 0.43
ABCF3-209ENST00000472608 MYCP01106 439 aaPredicted RBP17.72■□□□□ 0.43
ABCF3-209ENST00000472608 VGLL4Q14135 290 aa17.72■□□□□ 0.43
ABCF3-209ENST00000472608 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 188.3 ms