RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 AFF2P51816 1311 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 AFMP43652 599 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 KIAA1841Q6NSI8 718 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 ERLIN1O75477 346 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 CFBP00751 764 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 RBM25P49756 843 aaKnown RBP9.72□□□□□ -0.85
CD47-204ENST00000471694 MTHFSDQ2M296 383 aaKnown RBP9.72□□□□□ -0.85
CD47-204ENST00000471694 CCDC93Q567U6 631 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 MICALL1Q8N3F8 863 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 TGFBRAP1Q8WUH2 860 aa9.72□□□□□ -0.85
CD47-204ENST00000471694 CLRN2A0PK11 232 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 XRCC6P12956 609 aaKnown RBP eCLIP9.71□□□□□ -0.85
CD47-204ENST00000471694 ATP2B4P23634 1241 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 GNPTABQ3T906 1256 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 CCDC14Q49A88 953 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 MCMDC2Q4G0Z9 681 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 KANK3Q6NY19 840 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 SESTD1Q86VW0 696 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 CERS3Q8IU89 383 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 KIF9Q9HAQ2 790 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 PCF11O94913 1555 aaKnown RBP9.71□□□□□ -0.85
CD47-204ENST00000471694 TIAM1Q13009 1591 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 PLEKHG3A1L390 1219 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 STX10O60499 249 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 ALDH1L1O75891 902 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 FILIP1Q7Z7B0 1213 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 CEP63Q96MT8 703 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 SPAG5Q96R06 1193 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 PIM2Q9P1W9 311 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 MBD4O95243 580 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 MCM7P33993 719 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 KRT9P35527 623 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 TFCP2Q12800 502 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 MAP3K11Q16584 847 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 RRAGBQ5VZM2 374 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 MAPKAPK5Q8IW41 473 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 CARD10Q9BWT7 1032 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 PLVAPQ9BX97 442 aa9.71□□□□□ -0.85
CD47-204ENST00000471694 TESPA1A2RU30 521 aaPredicted RBP9.71□□□□□ -0.86
CD47-204ENST00000471694 FSIP1Q8NA03 581 aa9.71□□□□□ -0.86
CD47-204ENST00000471694 ZKSCAN3Q9BRR0 538 aa9.71□□□□□ -0.86
CD47-204ENST00000471694 RAPGEF6Q8TEU7 1601 aa9.71□□□□□ -0.86
CD47-204ENST00000471694 ALAS1P13196 640 aa9.71□□□□□ -0.86
CD47-204ENST00000471694 RPS6KC1Q96S38 1066 aa9.71□□□□□ -0.86
CD47-204ENST00000471694 IFI16Q16666 785 aaKnown RBP9.71□□□□□ -0.86
CD47-204ENST00000471694 FRMD4BQ9Y2L6 1034 aa9.71□□□□□ -0.86
CD47-204ENST00000471694 CALRP27797 417 aaKnown RBP9.7□□□□□ -0.86
CD47-204ENST00000471694 GANCQ8TET4 914 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 ANO10Q9NW15 660 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 DUOX2Q9NRD8 1548 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 ARHGEF35A5YM69 484 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 KIAA0754O94854 1291 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 CWF19L2Q2TBE0 894 aaKnown RBP9.7□□□□□ -0.86
CD47-204ENST00000471694 MFSD14BQ5SR56 506 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 TSHZ3Q63HK5 1081 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 ISM2Q6H9L7 571 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 DNAJC10Q8IXB1 793 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 GCNAQ96QF7 691 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 RBM28Q9NW13 759 aaKnown RBP9.7□□□□□ -0.86
CD47-204ENST00000471694 HMG20BQ9P0W2 317 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 CNPY2Q9Y2B0 182 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 FAM169AQ9Y6X4 670 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 CRCPO75575 148 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 TOP1P11387 765 aaKnown RBP9.7□□□□□ -0.86
CD47-204ENST00000471694 HS1BP3Q53T59 392 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 CCDC125Q86Z20 511 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 UNC5CLQ8IV45 518 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 CERKQ8TCT0 537 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 LRRC2Q9BYS8 371 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 A1BGP04217 495 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 RARSP54136 660 aaKnown RBP9.7□□□□□ -0.86
CD47-204ENST00000471694 PLCB3Q01970 1234 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 NCAPH2Q6IBW4 605 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 C1orf228Q6PIY5 440 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 CCDC63Q8NA47 563 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 EXOC7Q9UPT5 735 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 PA2G4Q9UQ80 394 aaKnown RBP9.7□□□□□ -0.86
CD47-204ENST00000471694 KDM2BQ8NHM5 1336 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 RNF113AO15541 343 aaKnown RBP9.7□□□□□ -0.86
CD47-204ENST00000471694 CUL4BQ13620 913 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 ABCC10Q5T3U5 1492 aa9.7□□□□□ -0.86
CD47-204ENST00000471694 BMP15O95972 392 aa9.69□□□□□ -0.86
CD47-204ENST00000471694 PAFAH1B1P43034 410 aa9.69□□□□□ -0.86
CD47-204ENST00000471694 SYCP2Q9BX26 1530 aa9.69□□□□□ -0.86
CD47-204ENST00000471694 SPDYE16A6NNV3 312 aaPredicted RBP9.69□□□□□ -0.86
CD47-204ENST00000471694 FLOT1O75955 427 aa9.69□□□□□ -0.86
CD47-204ENST00000471694 SPDYE2Q495Y8 402 aa9.69□□□□□ -0.86
CD47-204ENST00000471694 USPL1Q5W0Q7 1092 aa9.69□□□□□ -0.86
CD47-204ENST00000471694 PLBD2Q8NHP8 589 aa9.69□□□□□ -0.86
CD47-204ENST00000471694 CCT6BQ92526 530 aa9.69□□□□□ -0.86
CD47-204ENST00000471694 HINFPQ9BQA5 517 aa9.69□□□□□ -0.86
CD47-204ENST00000471694 CACYBPQ9HB71 228 aaKnown RBP9.69□□□□□ -0.86
CD47-204ENST00000471694 TXNDC16Q9P2K2 825 aa9.69□□□□□ -0.86
CD47-204ENST00000471694 CCT6AP40227 531 aaKnown RBP9.69□□□□□ -0.86
CD47-204ENST00000471694 YARSP54577 528 aaKnown RBP9.69□□□□□ -0.86
CD47-204ENST00000471694 CHURC1Q8WUH1 139 aa9.69□□□□□ -0.86
CD47-204ENST00000471694 KIF5CO60282 957 aa9.69□□□□□ -0.86
CD47-204ENST00000471694 BIN1O00499 593 aa9.69□□□□□ -0.86
CD47-204ENST00000471694 GRIN3BO60391 1043 aa9.69□□□□□ -0.86
CD47-204ENST00000471694 RAD17O75943 681 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms