RNA–Protein interactions for RNA: ENST00000471417.5

LINC01140-204, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 751 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-204ENST00000471417 IREB2P48200 963 aaKnown RBP11.94□□□□□ -0.5
LINC01140-204ENST00000471417 BCAMP50895 628 aa11.94□□□□□ -0.5
LINC01140-204ENST00000471417 CACNB3P54284 484 aa11.94□□□□□ -0.5
LINC01140-204ENST00000471417 METTL24Q5JXM2 366 aa11.94□□□□□ -0.5
LINC01140-204ENST00000471417 ANKRD13AQ8IZ07 590 aa11.94□□□□□ -0.5
LINC01140-204ENST00000471417 CNKSR2Q8WXI2 1034 aa11.94□□□□□ -0.5
LINC01140-204ENST00000471417 PTPN18Q99952 460 aa11.94□□□□□ -0.5
LINC01140-204ENST00000471417 TMEM39BQ9GZU3 492 aa11.94□□□□□ -0.5
LINC01140-204ENST00000471417 USP44Q9H0E7 712 aa11.94□□□□□ -0.5
LINC01140-204ENST00000471417 ELP3Q9H9T3 547 aa11.94□□□□□ -0.5
LINC01140-204ENST00000471417 UNCXA6NJT0 531 aa11.93□□□□□ -0.5
LINC01140-204ENST00000471417 PDE8BO95263 885 aa11.93□□□□□ -0.5
LINC01140-204ENST00000471417 CAP1Q01518 475 aa11.93□□□□□ -0.5
LINC01140-204ENST00000471417 CRHR2Q13324 411 aa11.93□□□□□ -0.5
LINC01140-204ENST00000471417 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.93□□□□□ -0.5
LINC01140-204ENST00000471417 VPS37DQ86XT2 251 aa11.93□□□□□ -0.5
LINC01140-204ENST00000471417 OPTNQ96CV9 577 aa11.93□□□□□ -0.5
LINC01140-204ENST00000471417 TRIM17Q9Y577 477 aa11.93□□□□□ -0.5
LINC01140-204ENST00000471417 TESPA1A2RU30 521 aaPredicted RBP11.92□□□□□ -0.5
LINC01140-204ENST00000471417 FRAT2O75474 233 aaPredicted RBP11.92□□□□□ -0.5
LINC01140-204ENST00000471417 TNFAIP1Q13829 316 aa11.92□□□□□ -0.5
LINC01140-204ENST00000471417 OTOP1Q7RTM1 612 aa11.92□□□□□ -0.5
LINC01140-204ENST00000471417 CDCA7LQ96GN5 454 aa11.92□□□□□ -0.5
LINC01140-204ENST00000471417 MS4A4AQ96JQ5 239 aa11.92□□□□□ -0.5
LINC01140-204ENST00000471417 PTPRCP08575 1304 aa11.91□□□□□ -0.5
LINC01140-204ENST00000471417 E9PSI1 815 aa11.91□□□□□ -0.5
LINC01140-204ENST00000471417 FGFR2P21802 821 aa11.91□□□□□ -0.5
LINC01140-204ENST00000471417 RFX5P48382 616 aaPredicted RBP11.91□□□□□ -0.5
LINC01140-204ENST00000471417 SLFN5Q08AF3 891 aa11.91□□□□□ -0.5
LINC01140-204ENST00000471417 VGLL4Q14135 290 aa11.91□□□□□ -0.5
LINC01140-204ENST00000471417 CAVIN4Q5BKX8 364 aa11.91□□□□□ -0.5
LINC01140-204ENST00000471417 CD99L2Q8TCZ2 262 aa11.91□□□□□ -0.5
LINC01140-204ENST00000471417 BRI3BPQ8WY22 251 aa11.91□□□□□ -0.5
LINC01140-204ENST00000471417 HTTP42858 3142 aa11.9□□□□□ -0.5
LINC01140-204ENST00000471417 MAP3K9P80192 1104 aa11.9□□□□□ -0.5
LINC01140-204ENST00000471417 HDLBPQ00341 1268 aaKnown RBP11.9□□□□□ -0.5
LINC01140-204ENST00000471417 PDE4DIPQ5VU43 2346 aa11.9□□□□□ -0.5
LINC01140-204ENST00000471417 APOBEC3HQ6NTF7 200 aaKnown RBP11.9□□□□□ -0.5
LINC01140-204ENST00000471417 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC01140-204ENST00000471417 TBC1D22AQ8WUA7 517 aa11.9□□□□□ -0.5
LINC01140-204ENST00000471417 TEKT1Q969V4 418 aa11.9□□□□□ -0.5
LINC01140-204ENST00000471417 OTOFQ9HC10 1997 aa11.89□□□□□ -0.51
LINC01140-204ENST00000471417 POTEFA5A3E0 1075 aa11.89□□□□□ -0.51
LINC01140-204ENST00000471417 EYA2O00167 538 aa11.89□□□□□ -0.51
LINC01140-204ENST00000471417 TNNI2P48788 182 aa11.89□□□□□ -0.51
LINC01140-204ENST00000471417 OTUD7BQ6GQQ9 843 aa11.89□□□□□ -0.51
LINC01140-204ENST00000471417 ATG9AQ7Z3C6 839 aa11.89□□□□□ -0.51
LINC01140-204ENST00000471417 OTUD5Q96G74 571 aa11.89□□□□□ -0.51
LINC01140-204ENST00000471417 ZDHHC15Q96MV8 337 aa11.89□□□□□ -0.51
LINC01140-204ENST00000471417 ARAP2Q8WZ64 1704 aa11.89□□□□□ -0.51
LINC01140-204ENST00000471417 LAMB1P07942 1786 aa11.88□□□□□ -0.51
LINC01140-204ENST00000471417 CENPFP49454 3210 aa11.88□□□□□ -0.51
LINC01140-204ENST00000471417 CCL15-CCL14A0A0B4J2E2 113 aa11.88□□□□□ -0.51
LINC01140-204ENST00000471417 IFIT1P09914 478 aaKnown RBP11.88□□□□□ -0.51
LINC01140-204ENST00000471417 SP3Q02447 781 aa11.88□□□□□ -0.51
LINC01140-204ENST00000471417 PUM3Q15397 648 aaKnown RBP11.88□□□□□ -0.51
LINC01140-204ENST00000471417 CCL15Q16663 113 aa11.88□□□□□ -0.51
LINC01140-204ENST00000471417 FAM43AQ8N2R8 423 aa11.88□□□□□ -0.51
LINC01140-204ENST00000471417 ERO1AQ96HE7 468 aa11.88□□□□□ -0.51
LINC01140-204ENST00000471417 SMC4Q9NTJ3 1288 aa11.88□□□□□ -0.51
LINC01140-204ENST00000471417 PTPN22Q9Y2R2 807 aa11.88□□□□□ -0.51
LINC01140-204ENST00000471417 MKI67P46013 3256 aaKnown RBP11.87□□□□□ -0.51
LINC01140-204ENST00000471417 SPDYE5A6NIY4 337 aa11.87□□□□□ -0.51
LINC01140-204ENST00000471417 ALDH1L2Q3SY69 923 aa11.87□□□□□ -0.51
LINC01140-204ENST00000471417 PRPF38BQ5VTL8 546 aaKnown RBP11.87□□□□□ -0.51
LINC01140-204ENST00000471417 ZKSCAN4Q969J2 545 aaPredicted RBP11.87□□□□□ -0.51
LINC01140-204ENST00000471417 WRNIP1Q96S55 665 aa11.87□□□□□ -0.51
LINC01140-204ENST00000471417 MRIQ9BWK5 157 aa11.87□□□□□ -0.51
LINC01140-204ENST00000471417 SIL1Q9H173 461 aa11.87□□□□□ -0.51
LINC01140-204ENST00000471417 EFCC1Q9HA90 598 aa11.87□□□□□ -0.51
LINC01140-204ENST00000471417 CSADQ9Y600 493 aa11.87□□□□□ -0.51
LINC01140-204ENST00000471417 SNCAIPQ9Y6H5 919 aa11.87□□□□□ -0.51
LINC01140-204ENST00000471417 KIF16BQ96L93 1317 aa11.86□□□□□ -0.51
LINC01140-204ENST00000471417 SLC5A1P13866 664 aa11.86□□□□□ -0.51
LINC01140-204ENST00000471417 GTF2A2P52657 109 aa11.86□□□□□ -0.51
LINC01140-204ENST00000471417 TAF1CQ15572 869 aaPredicted RBP11.86□□□□□ -0.51
LINC01140-204ENST00000471417 DIXDC1Q155Q3 683 aa11.86□□□□□ -0.51
LINC01140-204ENST00000471417 HHIPL2Q6UWX4 724 aa11.86□□□□□ -0.51
LINC01140-204ENST00000471417 MIGA2Q7L4E1 593 aa11.86□□□□□ -0.51
LINC01140-204ENST00000471417 FAM83AQ86UY5 434 aa11.86□□□□□ -0.51
LINC01140-204ENST00000471417 TRMT2AQ8IZ69 625 aaKnown RBP11.86□□□□□ -0.51
LINC01140-204ENST00000471417 LPIN2Q92539 896 aa11.86□□□□□ -0.51
LINC01140-204ENST00000471417 NOB1Q9ULX3 412 aaKnown RBP11.86□□□□□ -0.51
LINC01140-204ENST00000471417 SUGT1Q9Y2Z0 365 aa11.86□□□□□ -0.51
LINC01140-204ENST00000471417 IRF6O14896 467 aa11.85□□□□□ -0.51
LINC01140-204ENST00000471417 UBTFL1P0CB47 393 aaPredicted RBP11.85□□□□□ -0.51
LINC01140-204ENST00000471417 PRDX5P30044 214 aa11.85□□□□□ -0.51
LINC01140-204ENST00000471417 INPP5BP32019 993 aa11.85□□□□□ -0.51
LINC01140-204ENST00000471417 TCP10Q12799 353 aa11.85□□□□□ -0.51
LINC01140-204ENST00000471417 NFIAQ12857 509 aa11.85□□□□□ -0.51
LINC01140-204ENST00000471417 FKBP1CQ5VVH2 108 aa11.85□□□□□ -0.51
LINC01140-204ENST00000471417 ERO1BQ86YB8 467 aa11.85□□□□□ -0.51
LINC01140-204ENST00000471417 WDR66Q8TBY9 1149 aa11.85□□□□□ -0.51
LINC01140-204ENST00000471417 ZFYVE28Q9HCC9 887 aa11.85□□□□□ -0.51
LINC01140-204ENST00000471417 TMOD2Q9NZR1 351 aa11.85□□□□□ -0.51
LINC01140-204ENST00000471417 PA2G4Q9UQ80 394 aaKnown RBP11.85□□□□□ -0.51
LINC01140-204ENST00000471417 DAGLAQ9Y4D2 1042 aa11.85□□□□□ -0.51
LINC01140-204ENST00000471417 BRCA2P51587 3418 aa11.85□□□□□ -0.51
LINC01140-204ENST00000471417 BTBD19C9JJ37 291 aa11.84□□□□□ -0.51
LINC01140-204ENST00000471417 EN2P19622 333 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms