RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 GNAT2P19087 354 aa30.88■■■□□ 2.53
U2AF1-208ENST00000471250 WDR66Q8TBY9 1149 aa30.88■■■□□ 2.53
U2AF1-208ENST00000471250 ARMT1Q9H993 441 aa30.88■■■□□ 2.53
U2AF1-208ENST00000471250 CWC22Q9HCG8 908 aaKnown RBP30.88■■■□□ 2.53
U2AF1-208ENST00000471250 E7EWF7 191 aa30.87■■■□□ 2.53
U2AF1-208ENST00000471250 C6orf229H3BNL8 230 aa30.87■■■□□ 2.53
U2AF1-208ENST00000471250 HMGB1P09429 215 aaKnown RBP30.87■■■□□ 2.53
U2AF1-208ENST00000471250 IL1R1P14778 569 aa30.87■■■□□ 2.53
U2AF1-208ENST00000471250 ZGPATQ8N5A5 531 aaKnown RBP30.87■■■□□ 2.53
U2AF1-208ENST00000471250 SPTY2D1Q68D10 685 aaPredicted RBP30.87■■■□□ 2.53
U2AF1-208ENST00000471250 NAA16Q6N069 864 aaPredicted RBP30.87■■■□□ 2.53
U2AF1-208ENST00000471250 ADGRA1Q86SQ6 560 aa30.87■■■□□ 2.53
U2AF1-208ENST00000471250 LCORLQ8N3X6 602 aa30.87■■■□□ 2.53
U2AF1-208ENST00000471250 NSUN4Q96CB9 384 aaKnown RBP30.87■■■□□ 2.53
U2AF1-208ENST00000471250 INTS4Q96HW7 963 aaKnown RBP30.87■■■□□ 2.53
U2AF1-208ENST00000471250 ZMYM6O95789 1325 aa30.87■■■□□ 2.53
U2AF1-208ENST00000471250 CCDC88AQ3V6T2 1871 aa30.86■■■□□ 2.53
U2AF1-208ENST00000471250 ANKRD1Q15327 319 aa30.86■■■□□ 2.53
U2AF1-208ENST00000471250 MPNDQ8N594 471 aa30.86■■■□□ 2.53
U2AF1-208ENST00000471250 ZNF384Q8TF68 577 aa30.86■■■□□ 2.53
U2AF1-208ENST00000471250 ZSCAN31Q96LW9 406 aaPredicted RBP30.86■■■□□ 2.53
U2AF1-208ENST00000471250 APPP05067 770 aa30.85■■■□□ 2.53
U2AF1-208ENST00000471250 TMX4Q9H1E5 349 aaPredicted RBP30.85■■■□□ 2.53
U2AF1-208ENST00000471250 DUOX1Q9NRD9 1551 aa30.85■■■□□ 2.53
U2AF1-208ENST00000471250 MAGEB6P1A0A0J9YX57 407 aa30.84■■■□□ 2.53
U2AF1-208ENST00000471250 ZNF213O14771 459 aa30.84■■■□□ 2.53
U2AF1-208ENST00000471250 MECOMQ03112 1051 aa30.84■■■□□ 2.53
U2AF1-208ENST00000471250 MIGA1Q8NAN2 632 aa30.84■■■□□ 2.53
U2AF1-208ENST00000471250 CNKSR1Q969H4 720 aa30.84■■■□□ 2.53
U2AF1-208ENST00000471250 C10orf71Q711Q0 1435 aa30.83■■■□□ 2.53
U2AF1-208ENST00000471250 GSG1L2A8MUP6 293 aa30.83■■■□□ 2.53
U2AF1-208ENST00000471250 PRDX5P30044 214 aa30.83■■■□□ 2.53
U2AF1-208ENST00000471250 IFNL3Q8IZI9 196 aa30.83■■■□□ 2.53
U2AF1-208ENST00000471250 ANP32EQ9BTT0 268 aa30.83■■■□□ 2.53
U2AF1-208ENST00000471250 CHRNA5P30532 468 aa30.82■■■□□ 2.52
U2AF1-208ENST00000471250 HAND2P61296 217 aa30.82■■■□□ 2.52
U2AF1-208ENST00000471250 TOB2Q14106 344 aaPredicted RBP30.82■■■□□ 2.52
U2AF1-208ENST00000471250 OLFM4Q6UX06 510 aa30.82■■■□□ 2.52
U2AF1-208ENST00000471250 DPP8Q6V1X1 898 aaPredicted RBP30.82■■■□□ 2.52
U2AF1-208ENST00000471250 DHX32Q7L7V1 743 aaKnown RBP30.82■■■□□ 2.52
U2AF1-208ENST00000471250 TCEANC2Q96MN5 208 aa30.82■■■□□ 2.52
U2AF1-208ENST00000471250 RIOK1Q9BRS2 568 aaKnown RBP30.82■■■□□ 2.52
U2AF1-208ENST00000471250 LARP6Q9BRS8 491 aaKnown RBP30.82■■■□□ 2.52
U2AF1-208ENST00000471250 EPB41L4AQ9HCS5 686 aaPredicted RBP30.82■■■□□ 2.52
U2AF1-208ENST00000471250 SH2B1Q9NRF2 756 aaPredicted RBP30.82■■■□□ 2.52
U2AF1-208ENST00000471250 JAG2Q9Y219 1238 aa30.82■■■□□ 2.52
U2AF1-208ENST00000471250 SLC4A4Q9Y6R1 1079 aa30.82■■■□□ 2.52
U2AF1-208ENST00000471250 KIAA1551Q9HCM1 1747 aa30.82■■■□□ 2.52
U2AF1-208ENST00000471250 ILDR1Q86SU0 546 aaPredicted RBP30.81■■■□□ 2.52
U2AF1-208ENST00000471250 SLX4Q8IY92 1834 aa30.81■■■□□ 2.52
U2AF1-208ENST00000471250 EXOSC10Q01780 885 aaKnown RBP30.81■■■□□ 2.52
U2AF1-208ENST00000471250 PRKAB2O43741 272 aa30.8■■■□□ 2.52
U2AF1-208ENST00000471250 COA1Q9GZY4 146 aa30.8■■■□□ 2.52
U2AF1-208ENST00000471250 LARGE1O95461 756 aa30.79■■■□□ 2.52
U2AF1-208ENST00000471250 LDHBP07195 334 aaKnown RBP30.79■■■□□ 2.52
U2AF1-208ENST00000471250 NACAP1Q9BZK3 213 aa30.79■■■□□ 2.52
U2AF1-208ENST00000471250 NAPBQ9H115 298 aa30.79■■■□□ 2.52
U2AF1-208ENST00000471250 NFKBIBQ15653 356 aa30.78■■■□□ 2.52
U2AF1-208ENST00000471250 TPCN1Q9ULQ1 816 aa30.78■■■□□ 2.52
U2AF1-208ENST00000471250 RAB3GAP1Q15042 981 aa30.78■■■□□ 2.52
U2AF1-208ENST00000471250 Q6ZUG5 572 aa30.78■■■□□ 2.52
U2AF1-208ENST00000471250 DZIP1Q86YF9 867 aaKnown RBP30.78■■■□□ 2.52
U2AF1-208ENST00000471250 ZC3H12CQ9C0D7 883 aaKnown RBP30.78■■■□□ 2.52
U2AF1-208ENST00000471250 NBPF3Q9H094 633 aa30.78■■■□□ 2.52
U2AF1-208ENST00000471250 DLEC1Q9Y238 1755 aa30.77■■■□□ 2.52
U2AF1-208ENST00000471250 RIMBP2O15034 1052 aa30.77■■■□□ 2.52
U2AF1-208ENST00000471250 DYNLL1P63167 89 aaKnown RBP30.77■■■□□ 2.52
U2AF1-208ENST00000471250 ME3Q16798 604 aa30.77■■■□□ 2.52
U2AF1-208ENST00000471250 EYA3Q99504 573 aa30.77■■■□□ 2.52
U2AF1-208ENST00000471250 FAM205AQ6ZU69 1335 aa30.76■■■□□ 2.52
U2AF1-208ENST00000471250 NCOA7Q8NI08 942 aa30.75■■■□□ 2.51
U2AF1-208ENST00000471250 TDO2P48775 406 aa30.74■■■□□ 2.51
U2AF1-208ENST00000471250 GSTO1P78417 241 aa30.74■■■□□ 2.51
U2AF1-208ENST00000471250 NUCB2P80303 420 aa30.74■■■□□ 2.51
U2AF1-208ENST00000471250 NBR1Q14596 966 aa30.74■■■□□ 2.51
U2AF1-208ENST00000471250 TBC1D22AQ8WUA7 517 aa30.74■■■□□ 2.51
U2AF1-208ENST00000471250 C7orf43Q8WVR3 580 aa30.74■■■□□ 2.51
U2AF1-208ENST00000471250 AGXT2Q9BYV1 514 aa30.74■■■□□ 2.51
U2AF1-208ENST00000471250 TBC1D10CQ8IV04 446 aa30.74■■■□□ 2.51
U2AF1-208ENST00000471250 MB21D2Q8IYB1 491 aaPredicted RBP30.74■■■□□ 2.51
U2AF1-208ENST00000471250 TIAM2Q8IVF5 1701 aa30.73■■■□□ 2.51
U2AF1-208ENST00000471250 GRIK5Q16478 980 aa30.73■■■□□ 2.51
U2AF1-208ENST00000471250 FBXL16Q8N461 479 aa30.73■■■□□ 2.51
U2AF1-208ENST00000471250 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.73■■■□□ 2.51
U2AF1-208ENST00000471250 KIF13BQ9NQT8 1826 aa30.73■■■□□ 2.51
U2AF1-208ENST00000471250 CHD4Q14839 1912 aa30.72■■■□□ 2.51
U2AF1-208ENST00000471250 CC2D2BQ6DHV5 1058 aa30.71■■■□□ 2.51
U2AF1-208ENST00000471250 GIMAP6Q6P9H5 292 aa30.71■■■□□ 2.51
U2AF1-208ENST00000471250 RALYLQ86SE5 291 aaKnown RBP30.71■■■□□ 2.51
U2AF1-208ENST00000471250 CCDC83Q8IWF9 413 aa30.71■■■□□ 2.51
U2AF1-208ENST00000471250 SDR42E1Q8WUS8 393 aa30.71■■■□□ 2.51
U2AF1-208ENST00000471250 RTFDC1Q9BY42 306 aaPredicted RBP30.71■■■□□ 2.51
U2AF1-208ENST00000471250 LRRC2Q9BYS8 371 aa30.71■■■□□ 2.51
U2AF1-208ENST00000471250 WDR19Q8NEZ3 1342 aa30.71■■■□□ 2.51
U2AF1-208ENST00000471250 ST3GAL1Q11201 340 aa30.71■■■□□ 2.51
U2AF1-208ENST00000471250 TRDNQ13061 729 aa30.71■■■□□ 2.51
U2AF1-208ENST00000471250 BRF1Q92994 677 aa30.71■■■□□ 2.51
U2AF1-208ENST00000471250 AATFQ9NY61 560 aaKnown RBP eCLIP30.71■■■□□ 2.51
U2AF1-208ENST00000471250 LDHCP07864 332 aa30.7■■■□□ 2.5
U2AF1-208ENST00000471250 MCM5P33992 734 aa30.7■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms