RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 ANKRD2Q9GZV1 360 aa19.98■□□□□ 0.79
SMARCD3-206ENST00000470588 MINPP1Q9UNW1 487 aa19.98■□□□□ 0.79
SMARCD3-206ENST00000470588 CNPY2Q9Y2B0 182 aa19.98■□□□□ 0.79
SMARCD3-206ENST00000470588 PATL2C9JE40 543 aaKnown RBP19.98■□□□□ 0.79
SMARCD3-206ENST00000470588 APOBRQ0VD83 1088 aa19.98■□□□□ 0.79
SMARCD3-206ENST00000470588 COL23A1Q86Y22 540 aaPredicted RBP19.98■□□□□ 0.79
SMARCD3-206ENST00000470588 SYAP1Q96A49 352 aaPredicted RBP19.98■□□□□ 0.79
SMARCD3-206ENST00000470588 AIDAQ96BJ3 306 aa19.98■□□□□ 0.79
SMARCD3-206ENST00000470588 BRPF3Q9ULD4 1205 aa19.98■□□□□ 0.79
SMARCD3-206ENST00000470588 BAG6P46379 1132 aa19.97■□□□□ 0.79
SMARCD3-206ENST00000470588 HAND2P61296 217 aa19.97■□□□□ 0.79
SMARCD3-206ENST00000470588 MB21D2Q8IYB1 491 aaPredicted RBP19.97■□□□□ 0.79
SMARCD3-206ENST00000470588 MAGEB6Q8N7X4 407 aa19.97■□□□□ 0.79
SMARCD3-206ENST00000470588 STK32BQ9NY57 414 aa19.97■□□□□ 0.79
SMARCD3-206ENST00000470588 ZNF804BA4D1E1 1349 aa19.96■□□□□ 0.79
SMARCD3-206ENST00000470588 POLRMTO00411 1230 aaKnown RBP19.96■□□□□ 0.79
SMARCD3-206ENST00000470588 PDIA3P30101 505 aaKnown RBP19.96■□□□□ 0.79
SMARCD3-206ENST00000470588 HMGN5P82970 282 aaKnown RBP19.96■□□□□ 0.79
SMARCD3-206ENST00000470588 GDPD2Q9HCC8 539 aa19.96■□□□□ 0.79
SMARCD3-206ENST00000470588 TMEM63CQ9P1W3 806 aa19.96■□□□□ 0.79
SMARCD3-206ENST00000470588 RBM27Q9P2N5 1060 aaKnown RBP19.96■□□□□ 0.79
SMARCD3-206ENST00000470588 NSFL1CQ9UNZ2 370 aaKnown RBP19.96■□□□□ 0.79
SMARCD3-206ENST00000470588 QSER1Q2KHR3 1735 aa19.96■□□□□ 0.79
SMARCD3-206ENST00000470588 COL4A1P02462 1669 aa19.96■□□□□ 0.79
SMARCD3-206ENST00000470588 ZMYM6O95789 1325 aa19.96■□□□□ 0.79
SMARCD3-206ENST00000470588 GADD45BO75293 160 aaPredicted RBP19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 APPP05067 770 aa19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 UBE2HP62256 183 aa19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 GRAPQ13588 217 aa19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 CAVIN4Q5BKX8 364 aa19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 RALYLQ86SE5 291 aaKnown RBP19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 GRAPLQ8TC17 118 aaPredicted RBP19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 RBM17Q96I25 401 aaKnown RBP19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 KIF3AQ9Y496 699 aa19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 PRC1O43663 620 aa19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 JAK2O60674 1132 aa19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 DTNBO60941 627 aa19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 GNAT2P19087 354 aa19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 DNM1Q05193 864 aaKnown RBP19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 EN1Q05925 392 aaPredicted RBP19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 DDR1Q08345 913 aa19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 TRDNQ13061 729 aa19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 EZH2Q15910 746 aaKnown RBP19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 CAMKK2Q96RR4 588 aa19.95■□□□□ 0.78
SMARCD3-206ENST00000470588 PNPLA7Q6ZV29 1317 aa19.94■□□□□ 0.78
SMARCD3-206ENST00000470588 FAM184AQ8NB25 1140 aa19.94■□□□□ 0.78
SMARCD3-206ENST00000470588 NSUN7Q8NE18 718 aaKnown RBP19.94■□□□□ 0.78
SMARCD3-206ENST00000470588 MYO5AQ9Y4I1 1855 aaKnown RBP19.94■□□□□ 0.78
SMARCD3-206ENST00000470588 DOCK2Q92608 1830 aa19.94■□□□□ 0.78
SMARCD3-206ENST00000470588 TCHHQ07283 1943 aa19.93■□□□□ 0.78
SMARCD3-206ENST00000470588 CDC37L1Q7L3B6 337 aa19.93■□□□□ 0.78
SMARCD3-206ENST00000470588 CHST3Q7LGC8 479 aa19.93■□□□□ 0.78
SMARCD3-206ENST00000470588 LRP2BPQ9P2M1 347 aa19.93■□□□□ 0.78
SMARCD3-206ENST00000470588 PARP3Q9Y6F1 533 aa19.93■□□□□ 0.78
SMARCD3-206ENST00000470588 NRXN2Q9P2S2 1712 aa19.93■□□□□ 0.78
SMARCD3-206ENST00000470588 DENND2AQ9ULE3 1009 aa19.93■□□□□ 0.78
SMARCD3-206ENST00000470588 SEMA3EO15041 775 aa19.92■□□□□ 0.78
SMARCD3-206ENST00000470588 MBD4O95243 580 aa19.92■□□□□ 0.78
SMARCD3-206ENST00000470588 CTDNEP1O95476 244 aa19.92■□□□□ 0.78
SMARCD3-206ENST00000470588 KRT85P78386 507 aa19.92■□□□□ 0.78
SMARCD3-206ENST00000470588 SLC15A2Q16348 729 aa19.92■□□□□ 0.78
SMARCD3-206ENST00000470588 LRSAM1Q6UWE0 723 aa19.92■□□□□ 0.78
SMARCD3-206ENST00000470588 FBXO33Q7Z6M2 555 aa19.92■□□□□ 0.78
SMARCD3-206ENST00000470588 IFNL3Q8IZI9 196 aa19.92■□□□□ 0.78
SMARCD3-206ENST00000470588 ZSCAN16Q9H4T2 348 aaPredicted RBP19.92■□□□□ 0.78
SMARCD3-206ENST00000470588 GYG1P46976 350 aa19.91■□□□□ 0.78
SMARCD3-206ENST00000470588 ANTXR2P58335 489 aa19.91■□□□□ 0.78
SMARCD3-206ENST00000470588 CCT2P78371 535 aaKnown RBP19.91■□□□□ 0.78
SMARCD3-206ENST00000470588 CRY2Q49AN0 593 aa19.91■□□□□ 0.78
SMARCD3-206ENST00000470588 VPS37DQ86XT2 251 aa19.91■□□□□ 0.78
SMARCD3-206ENST00000470588 FAM84BQ96KN1 310 aaPredicted RBP19.91■□□□□ 0.78
SMARCD3-206ENST00000470588 NBPF3Q9H094 633 aa19.91■□□□□ 0.78
SMARCD3-206ENST00000470588 H3BQV1 296 aa19.9■□□□□ 0.78
SMARCD3-206ENST00000470588 ZBTB22O15209 634 aa19.9■□□□□ 0.78
SMARCD3-206ENST00000470588 FIBPO43427 364 aa19.9■□□□□ 0.78
SMARCD3-206ENST00000470588 DHX16O60231 1041 aaKnown RBP19.9■□□□□ 0.78
SMARCD3-206ENST00000470588 IFFO2Q5TF58 517 aa19.9■□□□□ 0.78
SMARCD3-206ENST00000470588 NAA16Q6N069 864 aaPredicted RBP19.9■□□□□ 0.78
SMARCD3-206ENST00000470588 KLHL34Q8N239 644 aa19.9■□□□□ 0.78
SMARCD3-206ENST00000470588 DDX11Q96FC9 970 aa19.9■□□□□ 0.78
SMARCD3-206ENST00000470588 NACAP1Q9BZK3 213 aa19.9■□□□□ 0.78
SMARCD3-206ENST00000470588 ARMT1Q9H993 441 aa19.9■□□□□ 0.78
SMARCD3-206ENST00000470588 NAP1L2Q9ULW6 460 aaPredicted RBP19.9■□□□□ 0.78
SMARCD3-206ENST00000470588 PTPDC1A2A3K4 754 aa19.9■□□□□ 0.78
SMARCD3-206ENST00000470588 GSG1L2A8MUP6 293 aa19.9■□□□□ 0.78
SMARCD3-206ENST00000470588 LETM1O95202 739 aaPredicted RBP19.9■□□□□ 0.78
SMARCD3-206ENST00000470588 PANK2Q9BZ23 570 aa19.9■□□□□ 0.78
SMARCD3-206ENST00000470588 NAPBQ9H115 298 aa19.9■□□□□ 0.78
SMARCD3-206ENST00000470588 CYP7A1P22680 504 aa19.89■□□□□ 0.77
SMARCD3-206ENST00000470588 FERMT3Q86UX7 667 aa19.89■□□□□ 0.77
SMARCD3-206ENST00000470588 TBC1D10CQ8IV04 446 aa19.89■□□□□ 0.77
SMARCD3-206ENST00000470588 BRIP1Q9BX63 1249 aa19.89■□□□□ 0.77
SMARCD3-206ENST00000470588 SCAND2PQ9GZW5 306 aaPredicted RBP19.89■□□□□ 0.77
SMARCD3-206ENST00000470588 ELP1O95163 1332 aa19.89■□□□□ 0.77
SMARCD3-206ENST00000470588 MMP10P09238 476 aa19.88■□□□□ 0.77
SMARCD3-206ENST00000470588 RESTQ13127 1097 aa19.88■□□□□ 0.77
SMARCD3-206ENST00000470588 TMC4Q7Z404 712 aa19.88■□□□□ 0.77
SMARCD3-206ENST00000470588 TMEM87BQ96K49 555 aa19.88■□□□□ 0.77
SMARCD3-206ENST00000470588 GPHNQ9NQX3 736 aaPredicted RBP19.88■□□□□ 0.77
SMARCD3-206ENST00000470588 PDS5AQ29RF7 1337 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms