RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 SRGNP10124 158 aa13.03□□□□□ -0.32
SND1-208ENST00000470463 NT5C2P49902 561 aa13.03□□□□□ -0.32
SND1-208ENST00000470463 GSTO1P78417 241 aa13.03□□□□□ -0.32
SND1-208ENST00000470463 TRDNQ13061 729 aa13.03□□□□□ -0.32
SND1-208ENST00000470463 CCDC24Q8N4L8 307 aa13.03□□□□□ -0.32
SND1-208ENST00000470463 MASTLQ96GX5 879 aa13.03□□□□□ -0.32
SND1-208ENST00000470463 STRBPQ96SI9 672 aaKnown RBP13.03□□□□□ -0.32
SND1-208ENST00000470463 RAI14Q9P0K7 980 aa13.03□□□□□ -0.32
SND1-208ENST00000470463 E7EWF7 191 aa13.02□□□□□ -0.33
SND1-208ENST00000470463 SNAP23O00161 211 aa13.02□□□□□ -0.33
SND1-208ENST00000470463 PPEF1O14829 653 aaPredicted RBP13.02□□□□□ -0.33
SND1-208ENST00000470463 FGD1P98174 961 aa13.02□□□□□ -0.33
SND1-208ENST00000470463 NAA16Q6N069 864 aaPredicted RBP13.02□□□□□ -0.33
SND1-208ENST00000470463 GIMAP6Q6P9H5 292 aa13.02□□□□□ -0.33
SND1-208ENST00000470463 CLEC17AQ6ZS10 378 aa13.02□□□□□ -0.33
SND1-208ENST00000470463 RALYLQ86SE5 291 aaKnown RBP13.02□□□□□ -0.33
SND1-208ENST00000470463 NCOA7Q8NI08 942 aa13.02□□□□□ -0.33
SND1-208ENST00000470463 ABCF2Q9UG63 623 aa13.02□□□□□ -0.33
SND1-208ENST00000470463 WWC3Q9ULE0 1092 aa13.02□□□□□ -0.33
SND1-208ENST00000470463 ATP6V0A2Q9Y487 856 aa13.02□□□□□ -0.33
SND1-208ENST00000470463 UFL1O94874 794 aa13.01□□□□□ -0.33
SND1-208ENST00000470463 APPP05067 770 aa13.01□□□□□ -0.33
SND1-208ENST00000470463 PCP11498 1178 aaKnown RBP13.01□□□□□ -0.33
SND1-208ENST00000470463 CYP7A1P22680 504 aa13.01□□□□□ -0.33
SND1-208ENST00000470463 NBR1Q14596 966 aa13.01□□□□□ -0.33
SND1-208ENST00000470463 GRIPAP1Q4V328 841 aa13.01□□□□□ -0.33
SND1-208ENST00000470463 STYK1Q6J9G0 422 aa13.01□□□□□ -0.33
SND1-208ENST00000470463 SLF2Q8IX21 1173 aa13.01□□□□□ -0.33
SND1-208ENST00000470463 TDRD7Q8NHU6 1098 aaKnown RBP13.01□□□□□ -0.33
SND1-208ENST00000470463 TBC1D22AQ8WUA7 517 aa13.01□□□□□ -0.33
SND1-208ENST00000470463 MTA3Q9BTC8 594 aa13.01□□□□□ -0.33
SND1-208ENST00000470463 NAPBQ9H115 298 aa13.01□□□□□ -0.33
SND1-208ENST00000470463 CNNM2Q9H8M5 875 aa13.01□□□□□ -0.33
SND1-208ENST00000470463 NSFL1CQ9UNZ2 370 aaKnown RBP13.01□□□□□ -0.33
SND1-208ENST00000470463 IRS2Q9Y4H2 1338 aa13.01□□□□□ -0.33
SND1-208ENST00000470463 COL4A1P02462 1669 aa13.01□□□□□ -0.33
SND1-208ENST00000470463 TAF1P21675 1872 aa13□□□□□ -0.33
SND1-208ENST00000470463 MAGEB6P1A0A0J9YX57 407 aa13□□□□□ -0.33
SND1-208ENST00000470463 MBD4O95243 580 aa13□□□□□ -0.33
SND1-208ENST00000470463 CHGBP05060 677 aa13□□□□□ -0.33
SND1-208ENST00000470463 LDHCP07864 332 aa13□□□□□ -0.33
SND1-208ENST00000470463 PDCP20941 246 aa13□□□□□ -0.33
SND1-208ENST00000470463 MCM5P33992 734 aa13□□□□□ -0.33
SND1-208ENST00000470463 GPSM2P81274 684 aa13□□□□□ -0.33
SND1-208ENST00000470463 EYA3Q99504 573 aa13□□□□□ -0.33
SND1-208ENST00000470463 AGXT2Q9BYV1 514 aa13□□□□□ -0.33
SND1-208ENST00000470463 RNF41Q9H4P4 317 aaPredicted RBP13□□□□□ -0.33
SND1-208ENST00000470463 SMC3Q9UQE7 1217 aa13□□□□□ -0.33
SND1-208ENST00000470463 KIF3AQ9Y496 699 aa13□□□□□ -0.33
SND1-208ENST00000470463 LRRC37AA6NMS7 1700 aa12.99□□□□□ -0.33
SND1-208ENST00000470463 WDR33Q9C0J8 1336 aaKnown RBP12.99□□□□□ -0.33
SND1-208ENST00000470463 H0YIN7 160 aa12.99□□□□□ -0.33
SND1-208ENST00000470463 IL1R1P14778 569 aa12.99□□□□□ -0.33
SND1-208ENST00000470463 CC2D2BQ6DHV5 1058 aa12.99□□□□□ -0.33
SND1-208ENST00000470463 IFNL3Q8IZI9 196 aa12.99□□□□□ -0.33
SND1-208ENST00000470463 CNKSR1Q969H4 720 aa12.99□□□□□ -0.33
SND1-208ENST00000470463 COA1Q9GZY4 146 aa12.99□□□□□ -0.33
SND1-208ENST00000470463 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
SND1-208ENST00000470463 SUGT1Q9Y2Z0 365 aa12.99□□□□□ -0.33
SND1-208ENST00000470463 ATP6V1DQ9Y5K8 247 aa12.99□□□□□ -0.33
SND1-208ENST00000470463 SLC4A4Q9Y6R1 1079 aa12.99□□□□□ -0.33
SND1-208ENST00000470463 MYH13Q9UKX3 1938 aa12.98□□□□□ -0.33
SND1-208ENST00000470463 DHX16O60231 1041 aaKnown RBP12.98□□□□□ -0.33
SND1-208ENST00000470463 LDHBP07195 334 aaKnown RBP12.98□□□□□ -0.33
SND1-208ENST00000470463 MCM4P33991 863 aa12.98□□□□□ -0.33
SND1-208ENST00000470463 EXOSC10Q01780 885 aaKnown RBP12.98□□□□□ -0.33
SND1-208ENST00000470463 SLFNL1Q499Z3 407 aa12.98□□□□□ -0.33
SND1-208ENST00000470463 NOL8Q76FK4 1167 aaKnown RBP12.98□□□□□ -0.33
SND1-208ENST00000470463 DZIP1Q86YF9 867 aaKnown RBP12.98□□□□□ -0.33
SND1-208ENST00000470463 MPNDQ8N594 471 aa12.98□□□□□ -0.33
SND1-208ENST00000470463 TBC1D16Q8TBP0 767 aa12.98□□□□□ -0.33
SND1-208ENST00000470463 TNPO1Q92973 898 aaKnown RBP12.98□□□□□ -0.33
SND1-208ENST00000470463 NSUN4Q96CB9 384 aaKnown RBP12.98□□□□□ -0.33
SND1-208ENST00000470463 ZNF274Q96GC6 653 aaPredicted RBP12.98□□□□□ -0.33
SND1-208ENST00000470463 LLPHQ9BRT6 129 aaKnown RBP12.98□□□□□ -0.33
SND1-208ENST00000470463 NOL10Q9BSC4 688 aaKnown RBP12.98□□□□□ -0.33
SND1-208ENST00000470463 KRT23Q9C075 422 aa12.98□□□□□ -0.33
SND1-208ENST00000470463 MAST2Q6P0Q8 1798 aa12.97□□□□□ -0.33
SND1-208ENST00000470463 FOXP2O15409 715 aa12.97□□□□□ -0.33
SND1-208ENST00000470463 BAG3O95817 575 aa12.97□□□□□ -0.33
SND1-208ENST00000470463 PLCG2P16885 1265 aa12.97□□□□□ -0.33
SND1-208ENST00000470463 TDO2P48775 406 aa12.97□□□□□ -0.33
SND1-208ENST00000470463 TOB2Q14106 344 aaPredicted RBP12.97□□□□□ -0.33
SND1-208ENST00000470463 SKOR2Q2VWA4 1001 aaPredicted RBP12.97□□□□□ -0.33
SND1-208ENST00000470463 Q6ZUG5 572 aa12.97□□□□□ -0.33
SND1-208ENST00000470463 TMEM87BQ96K49 555 aa12.97□□□□□ -0.33
SND1-208ENST00000470463 CRNKL1Q9BZJ0 848 aaKnown RBP12.97□□□□□ -0.33
SND1-208ENST00000470463 GPBP1L1Q9HC44 474 aaPredicted RBP12.97□□□□□ -0.33
SND1-208ENST00000470463 CD209Q9NNX6 404 aa12.97□□□□□ -0.33
SND1-208ENST00000470463 ATP8A2Q9NTI2 1148 aa12.97□□□□□ -0.33
SND1-208ENST00000470463 TPCN1Q9ULQ1 816 aa12.97□□□□□ -0.33
SND1-208ENST00000470463 IQSEC3Q9UPP2 1182 aaPredicted RBP12.97□□□□□ -0.33
SND1-208ENST00000470463 COL1A1P02452 1464 aaPredicted RBP12.97□□□□□ -0.33
SND1-208ENST00000470463 UTRNP46939 3433 aa12.97□□□□□ -0.33
SND1-208ENST00000470463 ANKRD31Q8N7Z5 1873 aa12.96□□□□□ -0.33
SND1-208ENST00000470463 GSG1L2A8MUP6 293 aa12.96□□□□□ -0.33
SND1-208ENST00000470463 C6orf229H3BNL8 230 aa12.96□□□□□ -0.33
SND1-208ENST00000470463 SLC3A2P08195 630 aaKnown RBP12.96□□□□□ -0.33
SND1-208ENST00000470463 CPA1P15085 419 aa12.96□□□□□ -0.33
SND1-208ENST00000470463 EVCP57679 992 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 723.2 ms