RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 OVOS2Q6IE36 1432 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 RGPD1P0DJD0 1748 aa9.16□□□□□ -0.94
TPM3-215ENST00000469717 ZNF609O15014 1411 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 FOXN1O15353 648 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 TOP1P11387 765 aaKnown RBP9.15□□□□□ -0.94
TPM3-215ENST00000469717 GRIPAP1Q4V328 841 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 MON2Q7Z3U7 1717 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 ANKZF1Q9H8Y5 726 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 SETD1BQ9UPS6 1966 aaKnown RBP9.15□□□□□ -0.94
TPM3-215ENST00000469717 KIF28PB7ZC32 967 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 NRDCO43847 1150 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 WDHD1O75717 1129 aaPredicted RBP9.15□□□□□ -0.94
TPM3-215ENST00000469717 PFKFB1P16118 471 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 NLRP12P59046 1061 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 PDE4BQ07343 736 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 G3BP1Q13283 466 aaKnown RBP eCLIP9.15□□□□□ -0.941e-6■■■□□ 15.4
TPM3-215ENST00000469717 ADALQ6DHV7 355 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 TTLL5Q6EMB2 1281 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 ABCB6Q9NP58 842 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 CWC15Q9P013 229 aaKnown RBP9.15□□□□□ -0.94
TPM3-215ENST00000469717 PFKFB2O60825 505 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 ZNF827Q17R98 1081 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 SPECC1Q5M775 1068 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 LEKR1Q6ZMV7 388 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 TRMT44Q8IYL2 757 aaKnown RBP9.15□□□□□ -0.94
TPM3-215ENST00000469717 GDAP1L1Q96MZ0 367 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 AIFM3Q96NN9 605 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 NEO1Q92859 1461 aa9.15□□□□□ -0.94
TPM3-215ENST00000469717 IGSF1Q8N6C5 1336 aa9.15□□□□□ -0.95
TPM3-215ENST00000469717 ALDH1L1O75891 902 aa9.15□□□□□ -0.95
TPM3-215ENST00000469717 TTC31Q49AM3 519 aaPredicted RBP9.15□□□□□ -0.95
TPM3-215ENST00000469717 NAA16Q6N069 864 aaPredicted RBP9.15□□□□□ -0.95
TPM3-215ENST00000469717 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.15□□□□□ -0.95
TPM3-215ENST00000469717 CCDC102AQ96A19 550 aa9.15□□□□□ -0.95
TPM3-215ENST00000469717 ZNF396Q96N95 335 aaPredicted RBP9.15□□□□□ -0.95
TPM3-215ENST00000469717 PLCD4Q9BRC7 762 aa9.15□□□□□ -0.95
TPM3-215ENST00000469717 MAP2K7O14733 419 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 EIF4A1P60842 406 aaKnown RBP9.14□□□□□ -0.95
TPM3-215ENST00000469717 EPHA10Q5JZY3 1008 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 BEND6Q5SZJ8 279 aaPredicted RBP9.14□□□□□ -0.95
TPM3-215ENST00000469717 DBNLQ9UJU6 430 aaKnown RBP9.14□□□□□ -0.95
TPM3-215ENST00000469717 CARMIL3Q8ND23 1372 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 SOWAHDA6NJG2 315 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 CLSTN1O94985 981 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 VSTM4Q8IW00 320 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 RIN2Q8WYP3 895 aaPredicted RBP9.14□□□□□ -0.95
TPM3-215ENST00000469717 CLIC6Q96NY7 704 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 BAG1Q99933 345 aaPredicted RBP9.14□□□□□ -0.95
TPM3-215ENST00000469717 HINFPQ9BQA5 517 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 SRRTQ9BXP5 876 aaKnown RBP9.14□□□□□ -0.95
TPM3-215ENST00000469717 HMG20BQ9P0W2 317 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 KDRP35968 1356 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 PXDNLA1KZ92 1463 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 MYH15Q9Y2K3 1946 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 SPTLC2O15270 562 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 TXLNAP40222 546 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 KCNJ6P48051 423 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 USPL1Q5W0Q7 1092 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 LRRC31Q6UY01 552 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 FOXP4Q8IVH2 680 aaPredicted RBP9.14□□□□□ -0.95
TPM3-215ENST00000469717 CPLX3Q8WVH0 158 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 GOLGA1Q92805 767 aa9.14□□□□□ -0.95
TPM3-215ENST00000469717 ALDH8A1Q9H2A2 487 aaPredicted RBP9.14□□□□□ -0.95
TPM3-215ENST00000469717 BMP6P22004 513 aa9.13□□□□□ -0.95
TPM3-215ENST00000469717 PDIA3P30101 505 aaKnown RBP9.13□□□□□ -0.95
TPM3-215ENST00000469717 CHMP4BP1P59074 171 aa9.13□□□□□ -0.95
TPM3-215ENST00000469717 VSNL1P62760 191 aa9.13□□□□□ -0.95
TPM3-215ENST00000469717 PLEKHO1Q53GL0 409 aaPredicted RBP9.13□□□□□ -0.95
TPM3-215ENST00000469717 TC2NQ8N9U0 490 aa9.13□□□□□ -0.95
TPM3-215ENST00000469717 RABGGTAQ92696 567 aa9.13□□□□□ -0.95
TPM3-215ENST00000469717 A0A1B0GUL7 405 aa9.13□□□□□ -0.95
TPM3-215ENST00000469717 ATP8B1O43520 1251 aa9.13□□□□□ -0.95
TPM3-215ENST00000469717 PIP4K2AP48426 406 aaPredicted RBP9.13□□□□□ -0.95
TPM3-215ENST00000469717 HAND2P61296 217 aa9.13□□□□□ -0.95
TPM3-215ENST00000469717 NGLY1Q96IV0 654 aa9.13□□□□□ -0.95
TPM3-215ENST00000469717 MPHOSPH8Q99549 860 aa9.13□□□□□ -0.95
TPM3-215ENST00000469717 SNRKQ9NRH2 765 aa9.13□□□□□ -0.95
TPM3-215ENST00000469717 HIP1O00291 1037 aa9.13□□□□□ -0.95
TPM3-215ENST00000469717 CNNM3Q8NE01 707 aa9.13□□□□□ -0.95
TPM3-215ENST00000469717 RTEL1Q9NZ71 1219 aa9.13□□□□□ -0.95
TPM3-215ENST00000469717 SALL1Q9NSC2 1324 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 CCDC151A5D8V7 595 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 LRRIQ3A6PVS8 624 aaPredicted RBP9.12□□□□□ -0.95
TPM3-215ENST00000469717 LONRF3Q496Y0 759 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 MPRIPQ6WCQ1 1025 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 CADPS2Q86UW7 1296 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 DBNDD2Q9BQY9 259 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 FLT4P35916 1363 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 ARHGAP6O43182 974 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 ZSCAN12O43309 604 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 GUCY2CP25092 1073 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 MAGEA9P43362 315 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 MYL5Q02045 173 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 DHX32Q7L7V1 743 aaKnown RBP9.12□□□□□ -0.95
TPM3-215ENST00000469717 EHD4Q9H223 541 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 CACNA1FO60840 1977 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 ROBO2Q9HCK4 1378 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 UBE2Q2LH0YL09 131 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 CUTAO60888 179 aa9.12□□□□□ -0.95
TPM3-215ENST00000469717 RXRAP19793 462 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms