RNA–Protein interactions for RNA: ENST00000468874.2

TMEM50B-206, Transcript of transmembrane protein 50B, humanhuman

TSL 5

Gene TMEM50B, Length 724 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-206ENST00000468874 CCDC85AQ96PX6 553 aaPredicted RBP9.73□□□□□ -0.85
TMEM50B-206ENST00000468874 BRIP1Q9BX63 1249 aa9.73□□□□□ -0.85
TMEM50B-206ENST00000468874 CARD11Q9BXL7 1154 aa9.73□□□□□ -0.85
TMEM50B-206ENST00000468874 GGNBP2Q9H3C7 697 aa9.73□□□□□ -0.85
TMEM50B-206ENST00000468874 POLMQ9NP87 494 aaPredicted RBP9.73□□□□□ -0.85
TMEM50B-206ENST00000468874 DDX21Q9NR30 783 aaKnown RBP eCLIP9.73□□□□□ -0.85
TMEM50B-206ENST00000468874 TRAK2O60296 914 aa9.72□□□□□ -0.85
TMEM50B-206ENST00000468874 RNF217Q8TC41 542 aa9.72□□□□□ -0.85
TMEM50B-206ENST00000468874 WASHC2AQ641Q2 1341 aa9.72□□□□□ -0.85
TMEM50B-206ENST00000468874 SCN4AP35499 1836 aa9.72□□□□□ -0.85
TMEM50B-206ENST00000468874 COL5A3P25940 1745 aaPredicted RBP9.71□□□□□ -0.85
TMEM50B-206ENST00000468874 PPFIA3O75145 1194 aa9.71□□□□□ -0.86
TMEM50B-206ENST00000468874 SOX11P35716 441 aa9.71□□□□□ -0.86
TMEM50B-206ENST00000468874 PTSQ03393 145 aa9.71□□□□□ -0.86
TMEM50B-206ENST00000468874 FOXD4L5Q5VV16 416 aaPredicted RBP9.71□□□□□ -0.86
TMEM50B-206ENST00000468874 MAP1SQ66K74 1059 aaPredicted RBP9.71□□□□□ -0.86
TMEM50B-206ENST00000468874 OSBPL3Q9H4L5 887 aa9.71□□□□□ -0.86
TMEM50B-206ENST00000468874 VSIG8P0DPA2 414 aa9.7□□□□□ -0.86
TMEM50B-206ENST00000468874 RNF144AP50876 292 aaPredicted RBP9.7□□□□□ -0.86
TMEM50B-206ENST00000468874 AMOTQ4VCS5 1084 aa9.7□□□□□ -0.86
TMEM50B-206ENST00000468874 PLEKHO1Q53GL0 409 aaPredicted RBP9.7□□□□□ -0.86
TMEM50B-206ENST00000468874 STYK1Q6J9G0 422 aa9.7□□□□□ -0.86
TMEM50B-206ENST00000468874 CYP4F22Q6NT55 531 aa9.7□□□□□ -0.86
TMEM50B-206ENST00000468874 CYP2U1Q7Z449 544 aa9.7□□□□□ -0.86
TMEM50B-206ENST00000468874 HHIPL1Q96JK4 782 aa9.7□□□□□ -0.86
TMEM50B-206ENST00000468874 SOS1Q07889 1333 aaPredicted RBP9.7□□□□□ -0.86
TMEM50B-206ENST00000468874 ST20-MTHFSA0A0A6YYL1 179 aa9.69□□□□□ -0.86
TMEM50B-206ENST00000468874 A0A1W2PRU2 124 aa9.69□□□□□ -0.86
TMEM50B-206ENST00000468874 SLC35F4A4IF30 521 aa9.69□□□□□ -0.86
TMEM50B-206ENST00000468874 PPM1GO15355 546 aaPredicted RBP9.69□□□□□ -0.86
TMEM50B-206ENST00000468874 MTHFSP49914 203 aa9.69□□□□□ -0.86
TMEM50B-206ENST00000468874 ERBB4Q15303 1308 aa9.69□□□□□ -0.86
TMEM50B-206ENST00000468874 SLFNL1Q499Z3 407 aa9.69□□□□□ -0.86
TMEM50B-206ENST00000468874 GPC2Q8N158 579 aa9.69□□□□□ -0.86
TMEM50B-206ENST00000468874 NFATC2IPQ8NCF5 419 aa9.69□□□□□ -0.86
TMEM50B-206ENST00000468874 POM121Q96HA1 1249 aa9.69□□□□□ -0.86
TMEM50B-206ENST00000468874 DICER1Q9UPY3 1922 aaKnown RBP9.69□□□□□ -0.86
TMEM50B-206ENST00000468874 DLEC1Q9Y238 1755 aa9.69□□□□□ -0.86
TMEM50B-206ENST00000468874 CCDC88AQ3V6T2 1871 aa9.68□□□□□ -0.86
TMEM50B-206ENST00000468874 THSD7BQ9C0I4 1608 aa9.68□□□□□ -0.86
TMEM50B-206ENST00000468874 GPC1P35052 558 aa9.68□□□□□ -0.86
TMEM50B-206ENST00000468874 GRM1Q13255 1194 aa9.68□□□□□ -0.86
TMEM50B-206ENST00000468874 TSGA10IPQ3SY00 556 aa9.68□□□□□ -0.86
TMEM50B-206ENST00000468874 NBPF15Q8N660 670 aa9.68□□□□□ -0.86
TMEM50B-206ENST00000468874 MYH14Q7Z406 1995 aaKnown RBP9.68□□□□□ -0.86
TMEM50B-206ENST00000468874 NRXN2Q9P2S2 1712 aa9.68□□□□□ -0.86
TMEM50B-206ENST00000468874 A0A087WZG4 1122 aa9.67□□□□□ -0.86
TMEM50B-206ENST00000468874 RAD21O60216 631 aa9.67□□□□□ -0.86
TMEM50B-206ENST00000468874 GMPRP36959 345 aa9.67□□□□□ -0.86
TMEM50B-206ENST00000468874 SEMA3FQ13275 785 aa9.67□□□□□ -0.86
TMEM50B-206ENST00000468874 CCDC93Q567U6 631 aa9.67□□□□□ -0.86
TMEM50B-206ENST00000468874 PRPF40BQ6NWY9 871 aaKnown RBP9.67□□□□□ -0.86
TMEM50B-206ENST00000468874 RNF135Q8IUD6 432 aa9.67□□□□□ -0.86
TMEM50B-206ENST00000468874 RTKN2Q8IZC4 609 aa9.67□□□□□ -0.86
TMEM50B-206ENST00000468874 MASTLQ96GX5 879 aa9.67□□□□□ -0.86
TMEM50B-206ENST00000468874 FER1L6Q2WGJ9 1857 aa9.66□□□□□ -0.86
TMEM50B-206ENST00000468874 COL15A1P39059 1388 aa9.66□□□□□ -0.86
TMEM50B-206ENST00000468874 RNF123Q5XPI4 1314 aa9.66□□□□□ -0.86
TMEM50B-206ENST00000468874 FZD9O00144 591 aa9.66□□□□□ -0.86
TMEM50B-206ENST00000468874 AOC2O75106 756 aa9.66□□□□□ -0.86
TMEM50B-206ENST00000468874 MYCP01106 439 aaPredicted RBP9.66□□□□□ -0.86
TMEM50B-206ENST00000468874 SRGNP10124 158 aa9.66□□□□□ -0.86
TMEM50B-206ENST00000468874 CYP19A1P11511 503 aaPredicted RBP9.66□□□□□ -0.86
TMEM50B-206ENST00000468874 LMOD1P29536 600 aaPredicted RBP9.66□□□□□ -0.86
TMEM50B-206ENST00000468874 FKBP4Q02790 459 aaKnown RBP eCLIP9.66□□□□□ -0.86
TMEM50B-206ENST00000468874 C1orf141Q5JVX7 400 aa9.66□□□□□ -0.86
TMEM50B-206ENST00000468874 CST9Q5W186 159 aa9.66□□□□□ -0.86
TMEM50B-206ENST00000468874 USP50Q70EL3 339 aaPredicted RBP9.66□□□□□ -0.86
TMEM50B-206ENST00000468874 LYSMD3Q7Z3D4 306 aa9.66□□□□□ -0.86
TMEM50B-206ENST00000468874 WWC1Q8IX03 1113 aa9.66□□□□□ -0.86
TMEM50B-206ENST00000468874 CCDC155Q8N6L0 562 aa9.66□□□□□ -0.86
TMEM50B-206ENST00000468874 DOLKQ9UPQ8 538 aa9.66□□□□□ -0.86
TMEM50B-206ENST00000468874 ADAMTSL1Q8N6G6 1762 aa9.65□□□□□ -0.86
TMEM50B-206ENST00000468874 GNRH1P01148 92 aa9.65□□□□□ -0.86
TMEM50B-206ENST00000468874 SOX10P56693 466 aa9.65□□□□□ -0.86
TMEM50B-206ENST00000468874 USP4Q13107 963 aa9.65□□□□□ -0.86
TMEM50B-206ENST00000468874 CLN3Q13286 438 aa9.65□□□□□ -0.86
TMEM50B-206ENST00000468874 PRR5LQ6MZQ0 368 aa9.65□□□□□ -0.86
TMEM50B-206ENST00000468874 ZNF530Q6P9A1 599 aaPredicted RBP9.65□□□□□ -0.86
TMEM50B-206ENST00000468874 BICDL1Q6ZP65 573 aa9.65□□□□□ -0.86
TMEM50B-206ENST00000468874 SAPCD2Q86UD0 394 aa9.65□□□□□ -0.86
TMEM50B-206ENST00000468874 DNAJC10Q8IXB1 793 aa9.65□□□□□ -0.86
TMEM50B-206ENST00000468874 JDP2Q8WYK2 163 aa9.65□□□□□ -0.86
TMEM50B-206ENST00000468874 TESK2Q96S53 571 aa9.65□□□□□ -0.86
TMEM50B-206ENST00000468874 TNRC18O15417 2968 aaPredicted RBP9.65□□□□□ -0.87
TMEM50B-206ENST00000468874 CARMIL3Q8ND23 1372 aa9.64□□□□□ -0.87
TMEM50B-206ENST00000468874 ZNF541Q9H0D2 1346 aa9.64□□□□□ -0.87
TMEM50B-206ENST00000468874 PDE4DIPQ5VU43 2346 aa9.64□□□□□ -0.87
TMEM50B-206ENST00000468874 MEN1O00255 615 aa9.64□□□□□ -0.87
TMEM50B-206ENST00000468874 NPHP1O15259 732 aa9.64□□□□□ -0.87
TMEM50B-206ENST00000468874 ST5P78524 1137 aa9.64□□□□□ -0.87
TMEM50B-206ENST00000468874 INSM1Q01101 510 aaPredicted RBP9.64□□□□□ -0.87
TMEM50B-206ENST00000468874 NOGQ13253 232 aa9.64□□□□□ -0.87
TMEM50B-206ENST00000468874 MAP7D1Q3KQU3 841 aa9.64□□□□□ -0.87
TMEM50B-206ENST00000468874 C7orf43Q8WVR3 580 aa9.64□□□□□ -0.87
TMEM50B-206ENST00000468874 ALG2Q9H553 416 aa9.64□□□□□ -0.87
TMEM50B-206ENST00000468874 SAGE1Q9NXZ1 904 aa9.64□□□□□ -0.87
TMEM50B-206ENST00000468874 ADAMTS7Q9UKP4 1686 aa9.64□□□□□ -0.87
TMEM50B-206ENST00000468874 AFDNP55196 1824 aaKnown RBP9.63□□□□□ -0.87
TMEM50B-206ENST00000468874 STARD3NLO95772 234 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms