RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 TIAF1O95411 115 aa8.77□□□□□ -1.01
LSM5-209ENST00000468872 RNF43Q68DV7 783 aa8.77□□□□□ -1.01
LSM5-209ENST00000468872 C12orf50Q8NA57 414 aaPredicted RBP8.77□□□□□ -1.01
LSM5-209ENST00000468872 RBCK1Q9BYM8 510 aa8.77□□□□□ -1.01
LSM5-209ENST00000468872 DNAJC25Q9H1X3 360 aa8.77□□□□□ -1.01
LSM5-209ENST00000468872 EHD4Q9H223 541 aa8.77□□□□□ -1.01
LSM5-209ENST00000468872 SUGCTQ9HAC7 445 aa8.77□□□□□ -1.01
LSM5-209ENST00000468872 CYP4F12Q9HCS2 524 aa8.77□□□□□ -1.01
LSM5-209ENST00000468872 GAS2O43903 313 aaKnown RBP8.76□□□□□ -1.01
LSM5-209ENST00000468872 EXOSC6Q5RKV6 272 aaKnown RBP8.76□□□□□ -1.01
LSM5-209ENST00000468872 ZDHHC13Q8IUH4 622 aa8.76□□□□□ -1.01
LSM5-209ENST00000468872 CCDC74AQ96AQ1 378 aa8.76□□□□□ -1.01
LSM5-209ENST00000468872 DBNDD2Q9BQY9 259 aa8.76□□□□□ -1.01
LSM5-209ENST00000468872 TGFB1P01137 390 aa8.75□□□□□ -1.01
LSM5-209ENST00000468872 SSTR4P31391 388 aa8.75□□□□□ -1.01
LSM5-209ENST00000468872 CD97P48960 835 aa8.75□□□□□ -1.01
LSM5-209ENST00000468872 ALKBH8Q96BT7 664 aaKnown RBP8.75□□□□□ -1.01
LSM5-209ENST00000468872 DMRTB1Q96MA1 342 aa8.75□□□□□ -1.01
LSM5-209ENST00000468872 DRD2P14416 443 aa8.74□□□□□ -1.01
LSM5-209ENST00000468872 ITPKAP23677 461 aa8.74□□□□□ -1.01
LSM5-209ENST00000468872 SGO2Q562F6 1265 aa8.74□□□□□ -1.01
LSM5-209ENST00000468872 ZNF428Q96B54 188 aa8.74□□□□□ -1.01
LSM5-209ENST00000468872 ZNF576Q9H609 170 aa8.74□□□□□ -1.01
LSM5-209ENST00000468872 PCMTD2Q9NV79 361 aa8.74□□□□□ -1.01
LSM5-209ENST00000468872 B3GALT4O96024 378 aa8.73□□□□□ -1.01
LSM5-209ENST00000468872 CYP11A1P05108 521 aa8.73□□□□□ -1.01
LSM5-209ENST00000468872 MAOBP27338 520 aa8.73□□□□□ -1.01
LSM5-209ENST00000468872 MAP4P27816 1152 aaKnown RBP8.73□□□□□ -1.01
LSM5-209ENST00000468872 CSRNP1Q96S65 589 aa8.73□□□□□ -1.01
LSM5-209ENST00000468872 ABCB6Q9NP58 842 aa8.73□□□□□ -1.01
LSM5-209ENST00000468872 CTSBP07858 339 aa8.72□□□□□ -1.01
LSM5-209ENST00000468872 POU4F3Q15319 338 aa8.72□□□□□ -1.01
LSM5-209ENST00000468872 PRPF40BQ6NWY9 871 aaKnown RBP8.72□□□□□ -1.01
LSM5-209ENST00000468872 TRIM56Q9BRZ2 755 aaKnown RBP8.72□□□□□ -1.01
LSM5-209ENST00000468872 DCTN4Q9UJW0 460 aa8.72□□□□□ -1.01
LSM5-209ENST00000468872 COBLO75128 1261 aa8.71□□□□□ -1.02
LSM5-209ENST00000468872 GADD45BO75293 160 aaPredicted RBP8.71□□□□□ -1.02
LSM5-209ENST00000468872 MED26O95402 600 aa8.71□□□□□ -1.02
LSM5-209ENST00000468872 MAPK1P28482 360 aa8.71□□□□□ -1.02
LSM5-209ENST00000468872 PTPN12Q05209 780 aaKnown RBP8.71□□□□□ -1.02
LSM5-209ENST00000468872 SOX4Q06945 474 aaPredicted RBP8.71□□□□□ -1.02
LSM5-209ENST00000468872 TMC7Q7Z402 723 aa8.71□□□□□ -1.02
LSM5-209ENST00000468872 C2CD4AQ8NCU7 369 aaPredicted RBP8.71□□□□□ -1.02
LSM5-209ENST00000468872 SHKBP1Q8TBC3 707 aa8.71□□□□□ -1.02
LSM5-209ENST00000468872 ANKRD33BA6NCL7 494 aa8.7□□□□□ -1.02
LSM5-209ENST00000468872 PRR19A6NJB7 356 aa8.7□□□□□ -1.02
LSM5-209ENST00000468872 ERCC3P19447 782 aa8.7□□□□□ -1.02
LSM5-209ENST00000468872 RXRBP28702 533 aa8.7□□□□□ -1.02
LSM5-209ENST00000468872 GRM2Q14416 872 aa8.7□□□□□ -1.02
LSM5-209ENST00000468872 DDX54Q8TDD1 881 aaKnown RBP8.7□□□□□ -1.02
LSM5-209ENST00000468872 EPS8L3Q8TE67 593 aaKnown RBP8.7□□□□□ -1.02
LSM5-209ENST00000468872 MFSD14AQ96MC6 490 aa8.7□□□□□ -1.02
LSM5-209ENST00000468872 TMEM238LA0A1B0GVL6 79 aa8.69□□□□□ -1.02
LSM5-209ENST00000468872 KIAA1324LA8MWY0 1029 aaPredicted RBP8.69□□□□□ -1.02
LSM5-209ENST00000468872 ECEL1O95672 775 aa8.69□□□□□ -1.02
LSM5-209ENST00000468872 ADH5P11766 374 aa8.69□□□□□ -1.02
LSM5-209ENST00000468872 RBM25P49756 843 aaKnown RBP8.69□□□□□ -1.02
LSM5-209ENST00000468872 USP11P51784 963 aa8.69□□□□□ -1.02
LSM5-209ENST00000468872 HP1BP3Q5SSJ5 553 aaPredicted RBP8.69□□□□□ -1.02
LSM5-209ENST00000468872 CDPF1Q6NVV7 123 aa8.69□□□□□ -1.02
LSM5-209ENST00000468872 NPAS4Q8IUM7 802 aa8.69□□□□□ -1.02
LSM5-209ENST00000468872 GLIS3Q8NEA6 775 aa8.69□□□□□ -1.02
LSM5-209ENST00000468872 FBLIM1Q8WUP2 373 aa8.69□□□□□ -1.02
LSM5-209ENST00000468872 CORO1BQ9BR76 489 aa8.69□□□□□ -1.02
LSM5-209ENST00000468872 ZFYVE1Q9HBF4 777 aa8.69□□□□□ -1.02
LSM5-209ENST00000468872 TRAK1Q9UPV9 953 aa8.69□□□□□ -1.02
LSM5-209ENST00000468872 FAM95CA0A1B0GW59 222 aa8.68□□□□□ -1.02
LSM5-209ENST00000468872 ASB16Q96NS5 453 aa8.68□□□□□ -1.02
LSM5-209ENST00000468872 WDR64B1ANS9 1081 aa8.67□□□□□ -1.02
LSM5-209ENST00000468872 GRIK1P39086 918 aa8.67□□□□□ -1.02
LSM5-209ENST00000468872 RPS26P11Q5JNZ5 115 aaPredicted RBP8.67□□□□□ -1.02
LSM5-209ENST00000468872 INTS5Q6P9B9 1019 aaKnown RBP8.67□□□□□ -1.02
LSM5-209ENST00000468872 ACTL7BQ9Y614 415 aa8.67□□□□□ -1.02
LSM5-209ENST00000468872 RANGAP1P46060 587 aaPredicted RBP8.66□□□□□ -1.02
LSM5-209ENST00000468872 FAAP100Q0VG06 881 aa8.66□□□□□ -1.02
LSM5-209ENST00000468872 NFKBIBQ15653 356 aa8.66□□□□□ -1.02
LSM5-209ENST00000468872 AKAP4Q5JQC9 854 aa8.66□□□□□ -1.02
LSM5-209ENST00000468872 PAOXQ6QHF9 649 aa8.66□□□□□ -1.02
LSM5-209ENST00000468872 PI16Q6UXB8 463 aa8.66□□□□□ -1.02
LSM5-209ENST00000468872 FBXL6Q8N531 539 aa8.66□□□□□ -1.02
LSM5-209ENST00000468872 EZH1Q92800 747 aaPredicted RBP8.66□□□□□ -1.02
LSM5-209ENST00000468872 RAD18Q9NS91 495 aa8.66□□□□□ -1.02
LSM5-209ENST00000468872 RBM47A0AV96 593 aaKnown RBP8.65□□□□□ -1.02
LSM5-209ENST00000468872 SPINK2P20155 84 aa8.65□□□□□ -1.02
LSM5-209ENST00000468872 AP3B2Q13367 1082 aa8.65□□□□□ -1.02
LSM5-209ENST00000468872 DSC3Q14574 896 aa8.65□□□□□ -1.02
LSM5-209ENST00000468872 YIPF2Q9BWQ6 316 aa8.65□□□□□ -1.02
LSM5-209ENST00000468872 KRTAP4-8Q9BYQ9 185 aa8.65□□□□□ -1.02
LSM5-209ENST00000468872 NLRP2Q9NX02 1062 aa8.65□□□□□ -1.02
LSM5-209ENST00000468872 TREHO43280 583 aa8.64□□□□□ -1.03
LSM5-209ENST00000468872 F13BP05160 661 aa8.64□□□□□ -1.03
LSM5-209ENST00000468872 ZNF157P51786 506 aaPredicted RBP8.64□□□□□ -1.03
LSM5-209ENST00000468872 ZSCAN29Q8IWY8 852 aaPredicted RBP8.64□□□□□ -1.03
LSM5-209ENST00000468872 GIMAP7Q8NHV1 300 aa8.64□□□□□ -1.03
LSM5-209ENST00000468872 PSMG3-AS1Q96PY0 264 aa8.64□□□□□ -1.03
LSM5-209ENST00000468872 FCGRTP55899 365 aa8.63□□□□□ -1.03
LSM5-209ENST00000468872 PLCB3Q01970 1234 aa8.63□□□□□ -1.03
LSM5-209ENST00000468872 PDE3AQ14432 1141 aa8.63□□□□□ -1.03
LSM5-209ENST00000468872 DTHD1Q6ZMT9 781 aa8.63□□□□□ -1.03
LSM5-209ENST00000468872 DYMQ7RTS9 669 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms