RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 RBM5P52756 815 aaKnown RBP eCLIP17.29■□□□□ 0.36
RPP40-204ENST00000468105 CACNB3P54284 484 aa17.29■□□□□ 0.36
RPP40-204ENST00000468105 CCL15Q16663 113 aa17.29■□□□□ 0.36
RPP40-204ENST00000468105 FAM9BQ8IZU0 186 aa17.29■□□□□ 0.36
RPP40-204ENST00000468105 LINS1Q8NG48 757 aa17.29■□□□□ 0.36
RPP40-204ENST00000468105 TDRD7Q8NHU6 1098 aaKnown RBP17.29■□□□□ 0.36
RPP40-204ENST00000468105 PUS3Q9BZE2 481 aaKnown RBP17.29■□□□□ 0.36
RPP40-204ENST00000468105 CALD1Q05682 793 aaKnown RBP17.28■□□□□ 0.36
RPP40-204ENST00000468105 TAF1CQ15572 869 aaPredicted RBP17.28■□□□□ 0.36
RPP40-204ENST00000468105 OTUD7BQ6GQQ9 843 aa17.28■□□□□ 0.36
RPP40-204ENST00000468105 LMBR1LQ6UX01 489 aa17.28■□□□□ 0.36
RPP40-204ENST00000468105 DZIP1LQ8IYY4 767 aaKnown RBP17.28■□□□□ 0.36
RPP40-204ENST00000468105 STK31Q9BXU1 1019 aa17.28■□□□□ 0.36
RPP40-204ENST00000468105 TTF2Q9UNY4 1162 aaKnown RBP17.28■□□□□ 0.36
RPP40-204ENST00000468105 SNCAIPQ9Y6H5 919 aa17.28■□□□□ 0.36
RPP40-204ENST00000468105 LAMA3Q16787 3333 aa17.28■□□□□ 0.36
RPP40-204ENST00000468105 MYO1BO43795 1136 aa17.27■□□□□ 0.36
RPP40-204ENST00000468105 MTFR1Q15390 333 aa17.27■□□□□ 0.36
RPP40-204ENST00000468105 SLC9C1Q4G0N8 1177 aa17.27■□□□□ 0.36
RPP40-204ENST00000468105 BEND3Q5T5X7 828 aa17.27■□□□□ 0.36
RPP40-204ENST00000468105 ZNF804AQ7Z570 1209 aa17.27■□□□□ 0.36
RPP40-204ENST00000468105 FAM84BQ96KN1 310 aaPredicted RBP17.27■□□□□ 0.36
RPP40-204ENST00000468105 TMEM106CQ9BVX2 250 aa17.27■□□□□ 0.36
RPP40-204ENST00000468105 COL6A3P12111 3177 aa17.26■□□□□ 0.35
RPP40-204ENST00000468105 BTBD19C9JJ37 291 aa17.26■□□□□ 0.35
RPP40-204ENST00000468105 MAP3K9P80192 1104 aa17.26■□□□□ 0.35
RPP40-204ENST00000468105 IFIT5Q13325 482 aaKnown RBP17.26■□□□□ 0.35
RPP40-204ENST00000468105 FKBP5Q13451 457 aaPredicted RBP17.26■□□□□ 0.35
RPP40-204ENST00000468105 MFSD14BQ5SR56 506 aa17.26■□□□□ 0.35
RPP40-204ENST00000468105 WWC1Q8IX03 1113 aa17.26■□□□□ 0.35
RPP40-204ENST00000468105 KAZALD1Q96I82 304 aa17.26■□□□□ 0.35
RPP40-204ENST00000468105 VAMP4O75379 141 aa17.25■□□□□ 0.35
RPP40-204ENST00000468105 SLC4A8Q2Y0W8 1093 aa17.25■□□□□ 0.35
RPP40-204ENST00000468105 CHRDL2Q6WN34 429 aa17.25■□□□□ 0.35
RPP40-204ENST00000468105 ZKSCAN4Q969J2 545 aaPredicted RBP17.25■□□□□ 0.35
RPP40-204ENST00000468105 ZFYVE28Q9HCC9 887 aa17.25■□□□□ 0.35
RPP40-204ENST00000468105 RBM27Q9P2N5 1060 aaKnown RBP17.25■□□□□ 0.35
RPP40-204ENST00000468105 SERPINA10Q9UK55 444 aa17.25■□□□□ 0.35
RPP40-204ENST00000468105 IQSEC3Q9UPP2 1182 aaPredicted RBP17.25■□□□□ 0.35
RPP40-204ENST00000468105 CHMP3Q9Y3E7 222 aa17.25■□□□□ 0.35
RPP40-204ENST00000468105 SPDYE5A6NIY4 337 aa17.24■□□□□ 0.35
RPP40-204ENST00000468105 IRF6O14896 467 aa17.24■□□□□ 0.35
RPP40-204ENST00000468105 TLR2O60603 784 aa17.24■□□□□ 0.35
RPP40-204ENST00000468105 CRKP46108 304 aa17.24■□□□□ 0.35
RPP40-204ENST00000468105 LACTBP83111 547 aaPredicted RBP17.24■□□□□ 0.35
RPP40-204ENST00000468105 GTF2A2P52657 109 aa17.23■□□□□ 0.35
RPP40-204ENST00000468105 LDHAL6AQ6ZMR3 332 aa17.23■□□□□ 0.35
RPP40-204ENST00000468105 UBE2Q1Q7Z7E8 422 aa17.23■□□□□ 0.35
RPP40-204ENST00000468105 PRO3102Q9H379 93 aa17.23■□□□□ 0.35
RPP40-204ENST00000468105 MYH16Q9H6N6 1097 aa17.23■□□□□ 0.35
RPP40-204ENST00000468105 C17orf99Q6UX52 265 aa17.22■□□□□ 0.35
RPP40-204ENST00000468105 SPINK5Q9NQ38 1064 aaPredicted RBP17.22■□□□□ 0.35
RPP40-204ENST00000468105 A0A0C4DFX4 3053 aa17.22■□□□□ 0.35
RPP40-204ENST00000468105 ADGRA2Q96PE1 1338 aa17.21■□□□□ 0.35
RPP40-204ENST00000468105 FANCIQ9NVI1 1328 aa17.21■□□□□ 0.35
RPP40-204ENST00000468105 HIBADHP31937 336 aaKnown RBP17.21■□□□□ 0.35
RPP40-204ENST00000468105 MOGSQ13724 837 aa17.21■□□□□ 0.35
RPP40-204ENST00000468105 TRIM47Q96LD4 638 aa17.21■□□□□ 0.35
RPP40-204ENST00000468105 CPA4Q9UI42 421 aa17.21■□□□□ 0.35
RPP40-204ENST00000468105 TNFAIP1Q13829 316 aa17.2■□□□□ 0.34
RPP40-204ENST00000468105 CCDC27Q2M243 656 aa17.2■□□□□ 0.34
RPP40-204ENST00000468105 FBXO33Q7Z6M2 555 aa17.2■□□□□ 0.34
RPP40-204ENST00000468105 NBPF11Q86T75 865 aa17.2■□□□□ 0.34
RPP40-204ENST00000468105 SUCLG2Q96I99 432 aa17.2■□□□□ 0.34
RPP40-204ENST00000468105 CNNM1Q9NRU3 951 aa17.2■□□□□ 0.34
RPP40-204ENST00000468105 RIPOR2Q9Y4F9 1068 aa17.2■□□□□ 0.34
RPP40-204ENST00000468105 INPP5BP32019 993 aa17.19■□□□□ 0.34
RPP40-204ENST00000468105 UBE4AQ14139 1066 aa17.19■□□□□ 0.34
RPP40-204ENST00000468105 APOBEC3HQ6NTF7 200 aaKnown RBP17.19■□□□□ 0.34
RPP40-204ENST00000468105 WRNIP1Q96S55 665 aa17.19■□□□□ 0.34
RPP40-204ENST00000468105 CHMP4AQ9BY43 222 aa17.19■□□□□ 0.34
RPP40-204ENST00000468105 GRM8O00222 908 aa17.18■□□□□ 0.34
RPP40-204ENST00000468105 OSBPP22059 807 aa17.18■□□□□ 0.34
RPP40-204ENST00000468105 EXOSC9Q06265 439 aaKnown RBP17.18■□□□□ 0.34
RPP40-204ENST00000468105 CCDC57Q2TAC2 916 aa17.18■□□□□ 0.34
RPP40-204ENST00000468105 LRRC24Q50LG9 513 aa17.18■□□□□ 0.34
RPP40-204ENST00000468105 NCBP3Q53F19 620 aaKnown RBP17.18■□□□□ 0.34
RPP40-204ENST00000468105 MIGA2Q7L4E1 593 aa17.18■□□□□ 0.34
RPP40-204ENST00000468105 ERO1BQ86YB8 467 aa17.18■□□□□ 0.34
RPP40-204ENST00000468105 CSADQ9Y600 493 aa17.18■□□□□ 0.34
RPP40-204ENST00000468105 CACNA1FO60840 1977 aa17.17■□□□□ 0.34
RPP40-204ENST00000468105 SOX1O00570 391 aaPredicted RBP17.17■□□□□ 0.34
RPP40-204ENST00000468105 CETPP11597 493 aa17.17■□□□□ 0.34
RPP40-204ENST00000468105 CHAF1AQ13111 956 aaPredicted RBP17.17■□□□□ 0.34
RPP40-204ENST00000468105 VGLL2Q8N8G2 317 aa17.17■□□□□ 0.34
RPP40-204ENST00000468105 NBPF7P0C2Y1 421 aaPredicted RBP17.16■□□□□ 0.34
RPP40-204ENST00000468105 PSMC4P43686 418 aa17.16■□□□□ 0.34
RPP40-204ENST00000468105 PPIL2Q13356 520 aa17.16■□□□□ 0.34
RPP40-204ENST00000468105 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.16■□□□□ 0.34
RPP40-204ENST00000468105 SRRDQ9UH36 339 aa17.16■□□□□ 0.34
RPP40-204ENST00000468105 IL16Q14005 1332 aa17.16■□□□□ 0.34
RPP40-204ENST00000468105 SLURP2P0DP57 97 aa17.15■□□□□ 0.34
RPP40-204ENST00000468105 BCAMP50895 628 aa17.15■□□□□ 0.34
RPP40-204ENST00000468105 SNAPC2Q13487 334 aa17.15■□□□□ 0.34
RPP40-204ENST00000468105 TAF7LQ5H9L4 462 aa17.15■□□□□ 0.34
RPP40-204ENST00000468105 KLHDC4Q8TBB5 520 aa17.15■□□□□ 0.34
RPP40-204ENST00000468105 DPF3Q92784 378 aa17.15■□□□□ 0.34
RPP40-204ENST00000468105 ZDHHC15Q96MV8 337 aa17.15■□□□□ 0.34
RPP40-204ENST00000468105 GABRQQ9UN88 632 aa17.15■□□□□ 0.34
RPP40-204ENST00000468105 CCL5P13501 91 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms