RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 GLIS2Q9BZE0 524 aaPredicted RBP16.68■□□□□ 0.26
SSBP1-206ENST00000467681 RWDD1Q9H446 243 aaPredicted RBP16.68■□□□□ 0.26
SSBP1-206ENST00000467681 PCDHAC2Q9Y5I4 1007 aa16.68■□□□□ 0.26
SSBP1-206ENST00000467681 COL1A1P02452 1464 aaPredicted RBP16.67■□□□□ 0.26
SSBP1-206ENST00000467681 SPDYE2BA6NHP3 402 aa16.67■□□□□ 0.26
SSBP1-206ENST00000467681 SMARCA5O60264 1052 aaPredicted RBP16.67■□□□□ 0.26
SSBP1-206ENST00000467681 SPDYE6P0CI01 402 aa16.67■□□□□ 0.26
SSBP1-206ENST00000467681 APLP1P51693 650 aa16.67■□□□□ 0.26
SSBP1-206ENST00000467681 PI16Q6UXB8 463 aa16.67■□□□□ 0.26
SSBP1-206ENST00000467681 SNRKQ9NRH2 765 aa16.67■□□□□ 0.26
SSBP1-206ENST00000467681 GGA3Q9NZ52 723 aa16.67■□□□□ 0.26
SSBP1-206ENST00000467681 ABCF2Q9UG63 623 aa16.67■□□□□ 0.26
SSBP1-206ENST00000467681 POLR2AP24928 1970 aaKnown RBP16.67■□□□□ 0.26
SSBP1-206ENST00000467681 MAST3O60307 1309 aa16.67■□□□□ 0.26
SSBP1-206ENST00000467681 TRAF5O00463 557 aa16.66■□□□□ 0.26
SSBP1-206ENST00000467681 PRDX5P30044 214 aa16.66■□□□□ 0.26
SSBP1-206ENST00000467681 TBC1D9Q6ZT07 1266 aa16.66■□□□□ 0.26
SSBP1-206ENST00000467681 SULF1Q8IWU6 871 aa16.66■□□□□ 0.26
SSBP1-206ENST00000467681 TEKT1Q969V4 418 aa16.66■□□□□ 0.26
SSBP1-206ENST00000467681 ZDHHC15Q96MV8 337 aa16.66■□□□□ 0.26
SSBP1-206ENST00000467681 BCL11AQ9H165 835 aa16.66■□□□□ 0.26
SSBP1-206ENST00000467681 ADAMTSL1Q8N6G6 1762 aa16.66■□□□□ 0.26
SSBP1-206ENST00000467681 PITPNM2Q9BZ72 1349 aa16.66■□□□□ 0.26
SSBP1-206ENST00000467681 FMR1Q06787 632 aaKnown RBP eCLIP16.65■□□□□ 0.26
SSBP1-206ENST00000467681 APOBEC3HQ6NTF7 200 aaKnown RBP16.65■□□□□ 0.26
SSBP1-206ENST00000467681 ERICH6Q7L0X2 663 aa16.65■□□□□ 0.26
SSBP1-206ENST00000467681 GCC1Q96CN9 775 aa16.65■□□□□ 0.26
SSBP1-206ENST00000467681 ZNF646O15015 1829 aaPredicted RBP16.65■□□□□ 0.26
SSBP1-206ENST00000467681 MYO1BO43795 1136 aa16.64■□□□□ 0.25
SSBP1-206ENST00000467681 IGHDP01880 384 aa16.64■□□□□ 0.25
SSBP1-206ENST00000467681 ZAP70P43403 619 aa16.64■□□□□ 0.25
SSBP1-206ENST00000467681 DLK2Q6UY11 383 aa16.64■□□□□ 0.25
SSBP1-206ENST00000467681 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.64■□□□□ 0.25
SSBP1-206ENST00000467681 FAM163AQ96GL9 167 aaPredicted RBP16.64■□□□□ 0.25
SSBP1-206ENST00000467681 ZNF70Q9UC06 446 aaPredicted RBP16.64■□□□□ 0.25
SSBP1-206ENST00000467681 AOX1Q06278 1338 aa16.64■□□□□ 0.25
SSBP1-206ENST00000467681 ADM5C9JUS6 153 aa16.63■□□□□ 0.25
SSBP1-206ENST00000467681 IGSF3O75054 1194 aa16.63■□□□□ 0.25
SSBP1-206ENST00000467681 CYP2E1P05181 493 aaPredicted RBP16.63■□□□□ 0.25
SSBP1-206ENST00000467681 ATP5JP18859 108 aa16.63■□□□□ 0.25
SSBP1-206ENST00000467681 DIXDC1Q155Q3 683 aa16.63■□□□□ 0.25
SSBP1-206ENST00000467681 SPDYE2Q495Y8 402 aa16.63■□□□□ 0.25
SSBP1-206ENST00000467681 ANKRD45Q5TZF3 282 aa16.63■□□□□ 0.25
SSBP1-206ENST00000467681 CST9Q5W186 159 aa16.63■□□□□ 0.25
SSBP1-206ENST00000467681 APOBEC3FQ8IUX4 373 aaKnown RBP16.63■□□□□ 0.25
SSBP1-206ENST00000467681 TDRD3Q9H7E2 651 aaKnown RBP16.63■□□□□ 0.25
SSBP1-206ENST00000467681 LRP2BPQ9P2M1 347 aa16.63■□□□□ 0.25
SSBP1-206ENST00000467681 TMEM88BA6NKF7 163 aa16.62■□□□□ 0.25
SSBP1-206ENST00000467681 MECOMQ03112 1051 aa16.62■□□□□ 0.25
SSBP1-206ENST00000467681 SLF2Q8IX21 1173 aa16.62■□□□□ 0.25
SSBP1-206ENST00000467681 SMC5Q8IY18 1101 aa16.62■□□□□ 0.25
SSBP1-206ENST00000467681 PIH1D3Q9NQM4 214 aaKnown RBP16.62■□□□□ 0.25
SSBP1-206ENST00000467681 RAI14Q9P0K7 980 aa16.62■□□□□ 0.25
SSBP1-206ENST00000467681 SCAF8Q9UPN6 1271 aaKnown RBP16.62■□□□□ 0.25
SSBP1-206ENST00000467681 DAGLAQ9Y4D2 1042 aa16.62■□□□□ 0.25
SSBP1-206ENST00000467681 CLRN2A0PK11 232 aa16.61■□□□□ 0.25
SSBP1-206ENST00000467681 CELF2O95319 508 aaKnown RBP16.61■□□□□ 0.25
SSBP1-206ENST00000467681 LDHCP07864 332 aa16.61■□□□□ 0.25
SSBP1-206ENST00000467681 DZIP1Q86YF9 867 aaKnown RBP16.61■□□□□ 0.25
SSBP1-206ENST00000467681 ZNF384Q8TF68 577 aa16.61■□□□□ 0.25
SSBP1-206ENST00000467681 NSUN4Q96CB9 384 aaKnown RBP16.61■□□□□ 0.25
SSBP1-206ENST00000467681 DEFB129Q9H1M3 183 aa16.61■□□□□ 0.25
SSBP1-206ENST00000467681 CREBZFQ9NS37 354 aa16.61■□□□□ 0.25
SSBP1-206ENST00000467681 ARAP2Q8WZ64 1704 aa16.61■□□□□ 0.25
SSBP1-206ENST00000467681 GSTO1P78417 241 aa16.6■□□□□ 0.25
SSBP1-206ENST00000467681 CDCA5Q96FF9 252 aa16.6■□□□□ 0.25
SSBP1-206ENST00000467681 BOLA2Q9H3K6 86 aa16.6■□□□□ 0.25
SSBP1-206ENST00000467681 ECHDC1Q9NTX5 307 aa16.6■□□□□ 0.25
SSBP1-206ENST00000467681 ZBTB47Q9UFB7 747 aaPredicted RBP16.6■□□□□ 0.25
SSBP1-206ENST00000467681 GAKO14976 1311 aa16.6■□□□□ 0.25
SSBP1-206ENST00000467681 GPR75-ASB3A0A0A6YYF3 556 aa16.59■□□□□ 0.25
SSBP1-206ENST00000467681 HTRA3P83110 453 aa16.59■□□□□ 0.25
SSBP1-206ENST00000467681 FKBP1CQ5VVH2 108 aa16.59■□□□□ 0.25
SSBP1-206ENST00000467681 PRAMEF18Q5VWM3 479 aa16.59■□□□□ 0.25
SSBP1-206ENST00000467681 CDC42EP5Q6NZY7 148 aa16.59■□□□□ 0.25
SSBP1-206ENST00000467681 HAUS7Q99871 368 aa16.59■□□□□ 0.25
SSBP1-206ENST00000467681 ANTXR1Q9H6X2 564 aa16.59■□□□□ 0.25
SSBP1-206ENST00000467681 VEZTQ9HBM0 779 aa16.59■□□□□ 0.25
SSBP1-206ENST00000467681 NDUFB9Q9Y6M9 179 aa16.59■□□□□ 0.25
SSBP1-206ENST00000467681 AKAP11Q9UKA4 1901 aa16.58■□□□□ 0.25
SSBP1-206ENST00000467681 RASA3Q14644 834 aa16.58■□□□□ 0.24
SSBP1-206ENST00000467681 TTF1Q15361 905 aaPredicted RBP16.58■□□□□ 0.24
SSBP1-206ENST00000467681 DNAJC5GQ8N7S2 189 aa16.58■□□□□ 0.24
SSBP1-206ENST00000467681 USP40Q9NVE5 1235 aa16.58■□□□□ 0.24
SSBP1-206ENST00000467681 PPP2R3BQ9Y5P8 575 aa16.58■□□□□ 0.24
SSBP1-206ENST00000467681 TCP10L2B9ZVM9 353 aa16.57■□□□□ 0.24
SSBP1-206ENST00000467681 CENPBP07199 599 aaPredicted RBP16.57■□□□□ 0.24
SSBP1-206ENST00000467681 TNFAIP1Q13829 316 aa16.57■□□□□ 0.24
SSBP1-206ENST00000467681 NAA16Q6N069 864 aaPredicted RBP16.57■□□□□ 0.24
SSBP1-206ENST00000467681 OTUD7AQ8TE49 926 aaPredicted RBP16.57■□□□□ 0.24
SSBP1-206ENST00000467681 GPATCH3Q96I76 525 aa16.57■□□□□ 0.24
SSBP1-206ENST00000467681 ZNF408Q9H9D4 720 aa16.57■□□□□ 0.24
SSBP1-206ENST00000467681 TMOD2Q9NZR1 351 aa16.57■□□□□ 0.24
SSBP1-206ENST00000467681 MROH7-TTC4A0A0A0MT08 1334 aa16.56■□□□□ 0.24
SSBP1-206ENST00000467681 GOLIM4O00461 696 aa16.56■□□□□ 0.24
SSBP1-206ENST00000467681 IDH1O75874 414 aaKnown RBP16.56■□□□□ 0.24
SSBP1-206ENST00000467681 CACNB3P54284 484 aa16.56■□□□□ 0.24
SSBP1-206ENST00000467681 PPP4CP60510 307 aa16.56■□□□□ 0.24
SSBP1-206ENST00000467681 NUCB1Q02818 461 aa16.56■□□□□ 0.24
SSBP1-206ENST00000467681 MAP3K12Q12852 859 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms