RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 TNFRSF10AO00220 468 aa5.62□□□□□ -1.51
CPS1-205ENST00000467353 HTATSF1O43719 755 aaKnown RBP5.62□□□□□ -1.51
CPS1-205ENST00000467353 IREB2P48200 963 aaKnown RBP5.62□□□□□ -1.51
CPS1-205ENST00000467353 MAP3K12Q12852 859 aa5.62□□□□□ -1.51
CPS1-205ENST00000467353 AIMP1Q12904 312 aaKnown RBP5.62□□□□□ -1.51
CPS1-205ENST00000467353 PPP1R15BQ5SWA1 713 aa5.62□□□□□ -1.51
CPS1-205ENST00000467353 STRIP1Q5VSL9 837 aa5.62□□□□□ -1.51
CPS1-205ENST00000467353 C17orf99Q6UX52 265 aa5.62□□□□□ -1.51
CPS1-205ENST00000467353 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.62□□□□□ -1.51
CPS1-205ENST00000467353 KIAA0825Q8IV33 1275 aa5.62□□□□□ -1.51
CPS1-205ENST00000467353 MAFAQ8NHW3 353 aaPredicted RBP5.62□□□□□ -1.51
CPS1-205ENST00000467353 RAET1EQ8TD07 263 aa5.62□□□□□ -1.51
CPS1-205ENST00000467353 SYMPKQ92797 1274 aaKnown RBP5.62□□□□□ -1.51
CPS1-205ENST00000467353 FBXW7Q969H0 707 aa5.62□□□□□ -1.51
CPS1-205ENST00000467353 DEFB118Q96PH6 123 aa5.62□□□□□ -1.51
CPS1-205ENST00000467353 AOX1Q06278 1338 aa5.62□□□□□ -1.51
CPS1-205ENST00000467353 SIPA1L3O60292 1781 aaPredicted RBP5.62□□□□□ -1.51
CPS1-205ENST00000467353 TMEM265A0A087WTH1 108 aa5.61□□□□□ -1.51
CPS1-205ENST00000467353 BTBD19C9JJ37 291 aa5.61□□□□□ -1.51
CPS1-205ENST00000467353 FMNL1O95466 1100 aaPredicted RBP5.61□□□□□ -1.51
CPS1-205ENST00000467353 EIF2S2P20042 333 aaKnown RBP5.61□□□□□ -1.51
CPS1-205ENST00000467353 MLLT3P42568 568 aaPredicted RBP5.61□□□□□ -1.51
CPS1-205ENST00000467353 GTF2A2P52657 109 aa5.61□□□□□ -1.51
CPS1-205ENST00000467353 HSP90AB3PQ58FF7 597 aa5.61□□□□□ -1.51
CPS1-205ENST00000467353 EYSQ5T1H1 3165 aa5.61□□□□□ -1.51
CPS1-205ENST00000467353 KDM3BQ7LBC6 1761 aa5.61□□□□□ -1.51
CPS1-205ENST00000467353 NECAB2Q7Z6G3 386 aa5.61□□□□□ -1.51
CPS1-205ENST00000467353 XAGE3Q8WTP9 111 aa5.61□□□□□ -1.51
CPS1-205ENST00000467353 CPA4Q9UI42 421 aa5.61□□□□□ -1.51
CPS1-205ENST00000467353 GABRQQ9UN88 632 aa5.61□□□□□ -1.51
CPS1-205ENST00000467353 PRUNE2Q8WUY3 3088 aa5.61□□□□□ -1.51
CPS1-205ENST00000467353 SCN9AQ15858 1988 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 ZNF804BA4D1E1 1349 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 MYPNQ86TC9 1320 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 CLRN2A0PK11 232 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 ATP5J2-PTCD1G3V325 749 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 IRS4O14654 1257 aaPredicted RBP5.6□□□□□ -1.51
CPS1-205ENST00000467353 ELNP15502 786 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 ATP2B4P23634 1241 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 HOXD10P28358 340 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 MMP14P50281 582 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 UBXN2AP68543 259 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 PRKCZQ05513 592 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 VGLL4Q14135 290 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 RASA3Q14644 834 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 DLGAP5Q15398 846 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 CC2D1BQ5T0F9 858 aaKnown RBP5.6□□□□□ -1.51
CPS1-205ENST00000467353 TTLL5Q6EMB2 1281 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 TXNRD3Q86VQ6 643 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 CDAN1Q8IWY9 1227 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 HELBQ8NG08 1087 aaPredicted RBP5.6□□□□□ -1.51
CPS1-205ENST00000467353 PNISRQ8TF01 805 aaKnown RBP5.6□□□□□ -1.51
CPS1-205ENST00000467353 PRMT6Q96LA8 375 aaPredicted RBP5.6□□□□□ -1.51
CPS1-205ENST00000467353 ISCA1Q9BUE6 129 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 SEMA6BQ9H3T3 888 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 PPP2R3BQ9Y5P8 575 aa5.6□□□□□ -1.51
CPS1-205ENST00000467353 COL3A1P02461 1466 aaPredicted RBP5.59□□□□□ -1.51
CPS1-205ENST00000467353 MUC3AQ02505 3323 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 XDHP47989 1333 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 MYO3BQ8WXR4 1341 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 SYNGAP1Q96PV0 1343 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 PER1O15534 1290 aaPredicted RBP5.59□□□□□ -1.51
CPS1-205ENST00000467353 MAP3K13O43283 966 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 ADCY3O60266 1144 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 WDHD1O75717 1129 aaPredicted RBP5.59□□□□□ -1.51
CPS1-205ENST00000467353 INHAP05111 366 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 CETPP11597 493 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 GTF2IP78347 998 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 MAP3K9P80192 1104 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 MAP2K5Q13163 448 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 TJAP1Q5JTD0 557 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 CERS5Q8N5B7 392 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 MTMR14Q8NCE2 650 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 SLAIN1Q8ND83 568 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 MYLIPQ8WY64 445 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 TEPSINQ96N21 525 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 CCDC85AQ96PX6 553 aaPredicted RBP5.59□□□□□ -1.51
CPS1-205ENST00000467353 COA1Q9GZY4 146 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 GOPCQ9HD26 462 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 PAK6Q9NQU5 681 aaPredicted RBP5.59□□□□□ -1.51
CPS1-205ENST00000467353 LAMA2P24043 3122 aaKnown RBP5.59□□□□□ -1.51
CPS1-205ENST00000467353 LRRC37AA6NMS7 1700 aa5.59□□□□□ -1.51
CPS1-205ENST00000467353 NUP98P52948 1817 aa5.58□□□□□ -1.52
CPS1-205ENST00000467353 DPYSL4O14531 572 aa5.58□□□□□ -1.52
CPS1-205ENST00000467353 IRF6O14896 467 aa5.58□□□□□ -1.52
CPS1-205ENST00000467353 U2AF1L5P0DN76 240 aaPredicted RBP5.58□□□□□ -1.52
CPS1-205ENST00000467353 KLRK1P26718 216 aa5.58□□□□□ -1.52
CPS1-205ENST00000467353 MDM2Q00987 491 aaPredicted RBP5.58□□□□□ -1.52
CPS1-205ENST00000467353 U2AF1Q01081 240 aaKnown RBP eCLIP5.58□□□□□ -1.52
CPS1-205ENST00000467353 CNGB1Q14028 1251 aaPredicted RBP5.58□□□□□ -1.52
CPS1-205ENST00000467353 CFAP100Q494V2 611 aa5.58□□□□□ -1.52
CPS1-205ENST00000467353 POTEDQ86YR6 584 aa5.58□□□□□ -1.52
CPS1-205ENST00000467353 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.58□□□□□ -1.52
CPS1-205ENST00000467353 JARID2Q92833 1246 aaPredicted RBP5.58□□□□□ -1.52
CPS1-205ENST00000467353 KIF12Q96FN5 646 aa5.58□□□□□ -1.52
CPS1-205ENST00000467353 SNX27Q96L92 541 aa5.58□□□□□ -1.52
CPS1-205ENST00000467353 PCMTD1Q96MG8 357 aaPredicted RBP5.58□□□□□ -1.52
CPS1-205ENST00000467353 FAM117AQ9C073 453 aa5.58□□□□□ -1.52
CPS1-205ENST00000467353 VEZTQ9HBM0 779 aa5.58□□□□□ -1.52
CPS1-205ENST00000467353 ZCCHC17Q9NP64 241 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms