RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 CRKP46108 304 aa13.54□□□□□ -0.24
MSH5-212ENST00000467319 CFAP100Q494V2 611 aa13.54□□□□□ -0.24
MSH5-212ENST00000467319 SMC5Q8IY18 1101 aa13.54□□□□□ -0.24
MSH5-212ENST00000467319 CNTROBQ8N137 903 aa13.54□□□□□ -0.24
MSH5-212ENST00000467319 ZGPATQ8N5A5 531 aaKnown RBP13.54□□□□□ -0.24
MSH5-212ENST00000467319 ZNF384Q8TF68 577 aa13.54□□□□□ -0.24
MSH5-212ENST00000467319 MRIQ9BWK5 157 aa13.54□□□□□ -0.24
MSH5-212ENST00000467319 RFX7Q2KHR2 1363 aa13.54□□□□□ -0.24
MSH5-212ENST00000467319 MYO5AQ9Y4I1 1855 aaKnown RBP13.53□□□□□ -0.24
MSH5-212ENST00000467319 LDHBP07195 334 aaKnown RBP13.53□□□□□ -0.24
MSH5-212ENST00000467319 IFIT2P09913 472 aaKnown RBP13.53□□□□□ -0.24
MSH5-212ENST00000467319 DLGAP5Q15398 846 aa13.53□□□□□ -0.24
MSH5-212ENST00000467319 RBM26Q5T8P6 1007 aaKnown RBP13.53□□□□□ -0.24
MSH5-212ENST00000467319 ANGEL2Q5VTE6 544 aaKnown RBP13.53□□□□□ -0.24
MSH5-212ENST00000467319 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.53□□□□□ -0.24
MSH5-212ENST00000467319 TEKT1Q969V4 418 aa13.53□□□□□ -0.24
MSH5-212ENST00000467319 GCC1Q96CN9 775 aa13.53□□□□□ -0.24
MSH5-212ENST00000467319 ZDHHC15Q96MV8 337 aa13.53□□□□□ -0.24
MSH5-212ENST00000467319 GLIS2Q9BZE0 524 aaPredicted RBP13.53□□□□□ -0.24
MSH5-212ENST00000467319 CLEC11AQ9Y240 323 aa13.53□□□□□ -0.24
MSH5-212ENST00000467319 GAKO14976 1311 aa13.53□□□□□ -0.24
MSH5-212ENST00000467319 SALL3Q9BXA9 1300 aa13.53□□□□□ -0.24
MSH5-212ENST00000467319 MYH2Q9UKX2 1941 aa13.52□□□□□ -0.24
MSH5-212ENST00000467319 ADM5C9JUS6 153 aa13.52□□□□□ -0.25
MSH5-212ENST00000467319 TRAF5O00463 557 aa13.52□□□□□ -0.25
MSH5-212ENST00000467319 CYP2E1P05181 493 aaPredicted RBP13.52□□□□□ -0.25
MSH5-212ENST00000467319 HSPA6P17066 643 aa13.52□□□□□ -0.25
MSH5-212ENST00000467319 DIXDC1Q155Q3 683 aa13.52□□□□□ -0.25
MSH5-212ENST00000467319 HHIPL2Q6UWX4 724 aa13.52□□□□□ -0.25
MSH5-212ENST00000467319 PRMT6Q96LA8 375 aaPredicted RBP13.52□□□□□ -0.25
MSH5-212ENST00000467319 DAGLAQ9Y4D2 1042 aa13.52□□□□□ -0.25
MSH5-212ENST00000467319 POLR2AP24928 1970 aaKnown RBP13.51□□□□□ -0.25
MSH5-212ENST00000467319 SSC5DA1L4H1 1573 aa13.51□□□□□ -0.25
MSH5-212ENST00000467319 IGSF3O75054 1194 aa13.51□□□□□ -0.25
MSH5-212ENST00000467319 IGHDP01880 384 aa13.51□□□□□ -0.25
MSH5-212ENST00000467319 ZAP70P43403 619 aa13.51□□□□□ -0.25
MSH5-212ENST00000467319 SPDYE2Q495Y8 402 aa13.51□□□□□ -0.25
MSH5-212ENST00000467319 APOBEC3HQ6NTF7 200 aaKnown RBP13.51□□□□□ -0.25
MSH5-212ENST00000467319 CDC37L1Q7L3B6 337 aa13.51□□□□□ -0.25
MSH5-212ENST00000467319 KRT26Q7Z3Y9 468 aa13.51□□□□□ -0.25
MSH5-212ENST00000467319 APOBEC3FQ8IUX4 373 aaKnown RBP13.51□□□□□ -0.25
MSH5-212ENST00000467319 DCPSQ96C86 337 aaKnown RBP13.51□□□□□ -0.25
MSH5-212ENST00000467319 PIH1D3Q9NQM4 214 aaKnown RBP13.51□□□□□ -0.25
MSH5-212ENST00000467319 SNRKQ9NRH2 765 aa13.51□□□□□ -0.25
MSH5-212ENST00000467319 PAPPA2Q9BXP8 1791 aa13.5□□□□□ -0.25
MSH5-212ENST00000467319 ATP5JP18859 108 aa13.5□□□□□ -0.25
MSH5-212ENST00000467319 APLP1P51693 650 aa13.5□□□□□ -0.25
MSH5-212ENST00000467319 MECOMQ03112 1051 aa13.5□□□□□ -0.25
MSH5-212ENST00000467319 FMR1Q06787 632 aaKnown RBP eCLIP13.5□□□□□ -0.25
MSH5-212ENST00000467319 SPTY2D1Q68D10 685 aaPredicted RBP13.5□□□□□ -0.25
MSH5-212ENST00000467319 TBC1D9Q6ZT07 1266 aa13.5□□□□□ -0.25
MSH5-212ENST00000467319 DZIP1Q86YF9 867 aaKnown RBP13.5□□□□□ -0.25
MSH5-212ENST00000467319 SULF1Q8IWU6 871 aa13.5□□□□□ -0.25
MSH5-212ENST00000467319 NSUN4Q96CB9 384 aaKnown RBP13.5□□□□□ -0.25
MSH5-212ENST00000467319 FAM163AQ96GL9 167 aaPredicted RBP13.5□□□□□ -0.25
MSH5-212ENST00000467319 RWDD1Q9H446 243 aaPredicted RBP13.5□□□□□ -0.25
MSH5-212ENST00000467319 ABCF2Q9UG63 623 aa13.5□□□□□ -0.25
MSH5-212ENST00000467319 MROH7-TTC4A0A0A0MT08 1334 aa13.49□□□□□ -0.25
MSH5-212ENST00000467319 CLRN2A0PK11 232 aa13.49□□□□□ -0.25
MSH5-212ENST00000467319 ERICH6Q7L0X2 663 aa13.49□□□□□ -0.25
MSH5-212ENST00000467319 OTUD7AQ8TE49 926 aaPredicted RBP13.49□□□□□ -0.25
MSH5-212ENST00000467319 NDUFB9Q9Y6M9 179 aa13.49□□□□□ -0.25
MSH5-212ENST00000467319 THSD7BQ9C0I4 1608 aa13.49□□□□□ -0.25
MSH5-212ENST00000467319 CNTNAP1P78357 1384 aa13.48□□□□□ -0.25
MSH5-212ENST00000467319 RPAP1Q9BWH6 1393 aaPredicted RBP13.48□□□□□ -0.25
MSH5-212ENST00000467319 MYO1BO43795 1136 aa13.48□□□□□ -0.25
MSH5-212ENST00000467319 CENPBP07199 599 aaPredicted RBP13.48□□□□□ -0.25
MSH5-212ENST00000467319 RBM5P52756 815 aaKnown RBP eCLIP13.48□□□□□ -0.25
MSH5-212ENST00000467319 DLK2Q6UY11 383 aa13.48□□□□□ -0.25
MSH5-212ENST00000467319 USP48Q86UV5 1035 aa13.48□□□□□ -0.25
MSH5-212ENST00000467319 HAUS7Q99871 368 aa13.48□□□□□ -0.25
MSH5-212ENST00000467319 ANTXR1Q9H6X2 564 aa13.48□□□□□ -0.25
MSH5-212ENST00000467319 ECHDC1Q9NTX5 307 aa13.48□□□□□ -0.25
MSH5-212ENST00000467319 ZNF70Q9UC06 446 aaPredicted RBP13.48□□□□□ -0.25
MSH5-212ENST00000467319 PPP2R3BQ9Y5P8 575 aa13.48□□□□□ -0.25
MSH5-212ENST00000467319 FOCADQ5VW36 1801 aa13.48□□□□□ -0.25
MSH5-212ENST00000467319 DDX60LQ5H9U9 1706 aaKnown RBP13.47□□□□□ -0.25
MSH5-212ENST00000467319 MYH7P12883 1935 aa13.47□□□□□ -0.25
MSH5-212ENST00000467319 TTC41PQ6P2S7 1318 aa13.47□□□□□ -0.25
MSH5-212ENST00000467319 NUCB1Q02818 461 aa13.47□□□□□ -0.25
MSH5-212ENST00000467319 FKBP1CQ5VVH2 108 aa13.47□□□□□ -0.25
MSH5-212ENST00000467319 CST9Q5W186 159 aa13.47□□□□□ -0.25
MSH5-212ENST00000467319 TMED8Q6PL24 325 aaPredicted RBP13.47□□□□□ -0.25
MSH5-212ENST00000467319 PI4K2BQ8TCG2 481 aa13.47□□□□□ -0.25
MSH5-212ENST00000467319 CDCA5Q96FF9 252 aa13.47□□□□□ -0.25
MSH5-212ENST00000467319 GPATCH3Q96I76 525 aa13.47□□□□□ -0.25
MSH5-212ENST00000467319 TDRD3Q9H7E2 651 aaKnown RBP13.47□□□□□ -0.25
MSH5-212ENST00000467319 CREBZFQ9NS37 354 aa13.47□□□□□ -0.25
MSH5-212ENST00000467319 LRP2BPQ9P2M1 347 aa13.47□□□□□ -0.25
MSH5-212ENST00000467319 CDK5RAP2Q96SN8 1893 aa13.46□□□□□ -0.25
MSH5-212ENST00000467319 GPR75-ASB3A0A0A6YYF3 556 aa13.46□□□□□ -0.25
MSH5-212ENST00000467319 MX1P20591 662 aa13.46□□□□□ -0.25
MSH5-212ENST00000467319 GSTO1P78417 241 aa13.46□□□□□ -0.25
MSH5-212ENST00000467319 ANKRD45Q5TZF3 282 aa13.46□□□□□ -0.25
MSH5-212ENST00000467319 TSHZ3Q63HK5 1081 aa13.46□□□□□ -0.25
MSH5-212ENST00000467319 CDC42EP5Q6NZY7 148 aa13.46□□□□□ -0.25
MSH5-212ENST00000467319 ADGRA1Q86SQ6 560 aa13.46□□□□□ -0.25
MSH5-212ENST00000467319 SLF2Q8IX21 1173 aa13.46□□□□□ -0.25
MSH5-212ENST00000467319 RAI14Q9P0K7 980 aa13.46□□□□□ -0.25
MSH5-212ENST00000467319 STAP2Q9UGK3 403 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms