RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 CNNM1Q9NRU3 951 aa17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 CLIP2Q9UDT6 1046 aa17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 ZNF652Q9Y2D9 606 aa17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 LAMA4Q16363 1823 aa17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 E7EWF7 191 aa17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 ADORA1P30542 326 aa17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 CCDC144BQ3MJ40 725 aa17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 CCDC144CPQ8IYA2 1237 aa17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 CACTINQ8WUQ7 758 aaKnown RBP17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 USP28Q96RU2 1077 aa17.23■□□□□ 0.35
PRPF38B-204ENST00000467302 CNTNAP4Q9C0A0 1308 aa17.22■□□□□ 0.35
PRPF38B-204ENST00000467302 A0A0G2JLW4 131 aa17.22■□□□□ 0.35
PRPF38B-204ENST00000467302 STX1AQ16623 288 aa17.22■□□□□ 0.35
PRPF38B-204ENST00000467302 ILDR1Q86SU0 546 aaPredicted RBP17.22■□□□□ 0.35
PRPF38B-204ENST00000467302 FBXL16Q8N461 479 aa17.22■□□□□ 0.35
PRPF38B-204ENST00000467302 ZNF274Q96GC6 653 aaPredicted RBP17.22■□□□□ 0.35
PRPF38B-204ENST00000467302 ARAP2Q8WZ64 1704 aa17.22■□□□□ 0.35
PRPF38B-204ENST00000467302 PDIA3P30101 505 aaKnown RBP17.21■□□□□ 0.35
PRPF38B-204ENST00000467302 ATP2B3Q16720 1220 aa17.21■□□□□ 0.35
PRPF38B-204ENST00000467302 MEX3CQ5U5Q3 659 aaKnown RBP17.21■□□□□ 0.35
PRPF38B-204ENST00000467302 LINC00116Q8NCU8 138 aa17.21■□□□□ 0.35
PRPF38B-204ENST00000467302 MRFAP1L1Q96HT8 127 aa17.21■□□□□ 0.35
PRPF38B-204ENST00000467302 MYH15Q9Y2K3 1946 aa17.21■□□□□ 0.35
PRPF38B-204ENST00000467302 RGL2O15211 777 aa17.21■□□□□ 0.35
PRPF38B-204ENST00000467302 CCT2P78371 535 aaKnown RBP17.21■□□□□ 0.35
PRPF38B-204ENST00000467302 FKBP4Q02790 459 aaKnown RBP eCLIP17.21■□□□□ 0.35
PRPF38B-204ENST00000467302 ZNF396Q96N95 335 aaPredicted RBP17.21■□□□□ 0.35
PRPF38B-204ENST00000467302 NCOA5Q9HCD5 579 aaKnown RBP17.21■□□□□ 0.35
PRPF38B-204ENST00000467302 MAST3O60307 1309 aa17.21■□□□□ 0.35
PRPF38B-204ENST00000467302 RNF113AO15541 343 aaKnown RBP17.2■□□□□ 0.34
PRPF38B-204ENST00000467302 EVCP57679 992 aa17.2■□□□□ 0.34
PRPF38B-204ENST00000467302 FAM160A1Q05DH4 1040 aa17.2■□□□□ 0.34
PRPF38B-204ENST00000467302 GOLGA6L19H0YKK7 550 aa17.2■□□□□ 0.34
PRPF38B-204ENST00000467302 FOSBP53539 338 aa17.2■□□□□ 0.34
PRPF38B-204ENST00000467302 LRRFIP1Q32MZ4 808 aaKnown RBP17.2■□□□□ 0.34
PRPF38B-204ENST00000467302 CLEC4GQ6UXB4 293 aa17.2■□□□□ 0.34
PRPF38B-204ENST00000467302 CCDC73Q6ZRK6 1079 aa17.2■□□□□ 0.34
PRPF38B-204ENST00000467302 NIP7Q9Y221 180 aaKnown RBP eCLIP17.2■□□□□ 0.34
PRPF38B-204ENST00000467302 RTL9Q8NET4 1388 aa17.19■□□□□ 0.34
PRPF38B-204ENST00000467302 NTSR2O95665 410 aa17.19■□□□□ 0.34
PRPF38B-204ENST00000467302 PPP4R3BQ5MIZ7 849 aa17.19■□□□□ 0.34
PRPF38B-204ENST00000467302 LRRC8AQ8IWT6 810 aa17.19■□□□□ 0.34
PRPF38B-204ENST00000467302 DHX40Q8IX18 779 aaKnown RBP17.19■□□□□ 0.34
PRPF38B-204ENST00000467302 C16orf45Q96MC5 204 aaPredicted RBP17.19■□□□□ 0.34
PRPF38B-204ENST00000467302 CARMIL3Q8ND23 1372 aa17.19■□□□□ 0.34
PRPF38B-204ENST00000467302 SMTNL1A8MU46 457 aa17.18■□□□□ 0.34
PRPF38B-204ENST00000467302 FDPSP14324 419 aaKnown RBP17.18■□□□□ 0.34
PRPF38B-204ENST00000467302 RBM6P78332 1123 aaKnown RBP17.18■□□□□ 0.34
PRPF38B-204ENST00000467302 VGLL2Q8N8G2 317 aa17.18■□□□□ 0.34
PRPF38B-204ENST00000467302 CHMP4CQ96CF2 233 aa17.18■□□□□ 0.34
PRPF38B-204ENST00000467302 GJD4Q96KN9 370 aaPredicted RBP17.18■□□□□ 0.34
PRPF38B-204ENST00000467302 PRDM4Q9UKN5 801 aa17.18■□□□□ 0.34
PRPF38B-204ENST00000467302 LY75O60449 1722 aa17.18■□□□□ 0.34
PRPF38B-204ENST00000467302 SBF2Q86WG5 1849 aa17.18■□□□□ 0.34
PRPF38B-204ENST00000467302 ATRNO75882 1429 aa17.18■□□□□ 0.34
PRPF38B-204ENST00000467302 MROH5Q6ZUA9 1318 aa17.18■□□□□ 0.34
PRPF38B-204ENST00000467302 M0R2C6 588 aa17.18■□□□□ 0.34
PRPF38B-204ENST00000467302 KINO60870 393 aaKnown RBP17.18■□□□□ 0.34
PRPF38B-204ENST00000467302 PDE8BO95263 885 aa17.18■□□□□ 0.34
PRPF38B-204ENST00000467302 TNNT1P13805 278 aa17.18■□□□□ 0.34
PRPF38B-204ENST00000467302 SYCP1Q15431 976 aa17.18■□□□□ 0.34
PRPF38B-204ENST00000467302 PDCL2Q8N4E4 241 aa17.18■□□□□ 0.34
PRPF38B-204ENST00000467302 MYH7P12883 1935 aa17.17■□□□□ 0.34
PRPF38B-204ENST00000467302 NEMFO60524 1076 aa17.17■□□□□ 0.34
PRPF38B-204ENST00000467302 CCDC152Q4G0S7 254 aa17.17■□□□□ 0.34
PRPF38B-204ENST00000467302 RC3H1Q5TC82 1133 aaKnown RBP17.17■□□□□ 0.34
PRPF38B-204ENST00000467302 CHST3Q7LGC8 479 aa17.17■□□□□ 0.34
PRPF38B-204ENST00000467302 FSIP1Q8NA03 581 aa17.17■□□□□ 0.34
PRPF38B-204ENST00000467302 OSBP2Q969R2 916 aa17.17■□□□□ 0.34
PRPF38B-204ENST00000467302 ANO10Q9NW15 660 aa17.17■□□□□ 0.34
PRPF38B-204ENST00000467302 RTEL1Q9NZ71 1219 aa17.17■□□□□ 0.34
PRPF38B-204ENST00000467302 PAXBP1Q9Y5B6 917 aa17.17■□□□□ 0.34
PRPF38B-204ENST00000467302 AFF2P51816 1311 aa17.16■□□□□ 0.34
PRPF38B-204ENST00000467302 FOXP2O15409 715 aa17.16■□□□□ 0.34
PRPF38B-204ENST00000467302 ZAP70P43403 619 aa17.16■□□□□ 0.34
PRPF38B-204ENST00000467302 ME1P48163 572 aa17.16■□□□□ 0.34
PRPF38B-204ENST00000467302 SCARF1Q14162 830 aa17.16■□□□□ 0.34
PRPF38B-204ENST00000467302 TTLL5Q6EMB2 1281 aa17.16■□□□□ 0.34
PRPF38B-204ENST00000467302 FMR1NBQ8N0W7 255 aaPredicted RBP17.16■□□□□ 0.34
PRPF38B-204ENST00000467302 ZNF512BQ96KM6 892 aaPredicted RBP17.16■□□□□ 0.34
PRPF38B-204ENST00000467302 ZFYP08048 801 aaPredicted RBP17.16■□□□□ 0.34
PRPF38B-204ENST00000467302 HSPA1LP34931 641 aa17.16■□□□□ 0.34
PRPF38B-204ENST00000467302 GUCY1B3Q02153 619 aa17.16■□□□□ 0.34
PRPF38B-204ENST00000467302 NCBP1Q09161 790 aaKnown RBP17.16■□□□□ 0.34
PRPF38B-204ENST00000467302 PCDHA7Q9UN72 937 aa17.16■□□□□ 0.34
PRPF38B-204ENST00000467302 TAF1LQ8IZX4 1826 aa17.16■□□□□ 0.34
PRPF38B-204ENST00000467302 A0A1W2PQ27 194 aa17.15■□□□□ 0.34
PRPF38B-204ENST00000467302 A0A1W2PQ64 194 aa17.15■□□□□ 0.34
PRPF38B-204ENST00000467302 A0A1W2PQD8 194 aa17.15■□□□□ 0.34
PRPF38B-204ENST00000467302 PPFIA3O75145 1194 aa17.15■□□□□ 0.34
PRPF38B-204ENST00000467302 PUM3Q15397 648 aaKnown RBP17.15■□□□□ 0.34
PRPF38B-204ENST00000467302 ADALQ6DHV7 355 aa17.15■□□□□ 0.34
PRPF38B-204ENST00000467302 AKAP11Q9UKA4 1901 aa17.15■□□□□ 0.34
PRPF38B-204ENST00000467302 A0A087WWV3 80 aa17.14■□□□□ 0.34
PRPF38B-204ENST00000467302 BECN2A8MW95 431 aa17.14■□□□□ 0.34
PRPF38B-204ENST00000467302 ARID5BQ14865 1188 aa17.14■□□□□ 0.34
PRPF38B-204ENST00000467302 MRPS27Q92552 414 aaKnown RBP17.14■□□□□ 0.34
PRPF38B-204ENST00000467302 MPHOSPH8Q99549 860 aa17.14■□□□□ 0.34
PRPF38B-204ENST00000467302 NAP1L2Q9ULW6 460 aaPredicted RBP17.14■□□□□ 0.34
PRPF38B-204ENST00000467302 COL24A1Q17RW2 1714 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms