RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 KIAA0319Q5VV43 1072 aa8.7□□□□□ -1.02
PRPF40A-205ENST00000467114 PIM2Q9P1W9 311 aa8.7□□□□□ -1.02
PRPF40A-205ENST00000467114 FAM95CA0A1B0GW59 222 aa8.69□□□□□ -1.02
PRPF40A-205ENST00000467114 CYP11A1P05108 521 aa8.69□□□□□ -1.02
PRPF40A-205ENST00000467114 F13BP05160 661 aa8.69□□□□□ -1.02
PRPF40A-205ENST00000467114 IRAK1P51617 712 aa8.69□□□□□ -1.02
PRPF40A-205ENST00000467114 USP11P51784 963 aa8.69□□□□□ -1.02
PRPF40A-205ENST00000467114 CPSF6Q16630 551 aaKnown RBP eCLIP8.69□□□□□ -1.02
PRPF40A-205ENST00000467114 USPL1Q5W0Q7 1092 aa8.69□□□□□ -1.02
PRPF40A-205ENST00000467114 CDPF1Q6NVV7 123 aa8.69□□□□□ -1.02
PRPF40A-205ENST00000467114 GIMAP7Q8NHV1 300 aa8.69□□□□□ -1.02
PRPF40A-205ENST00000467114 EZH1Q92800 747 aaPredicted RBP8.69□□□□□ -1.02
PRPF40A-205ENST00000467114 FAM129BQ96TA1 746 aa8.69□□□□□ -1.02
PRPF40A-205ENST00000467114 NDUFB5O43674 189 aa8.68□□□□□ -1.02
PRPF40A-205ENST00000467114 HOXA10P31260 410 aaPredicted RBP8.68□□□□□ -1.02
PRPF40A-205ENST00000467114 PDE3BQ13370 1112 aa8.68□□□□□ -1.02
PRPF40A-205ENST00000467114 PAOXQ6QHF9 649 aa8.68□□□□□ -1.02
PRPF40A-205ENST00000467114 FBLIM1Q8WUP2 373 aa8.68□□□□□ -1.02
PRPF40A-205ENST00000467114 CITED4Q96RK1 184 aa8.68□□□□□ -1.02
PRPF40A-205ENST00000467114 ATG3Q9NT62 314 aa8.68□□□□□ -1.02
PRPF40A-205ENST00000467114 WNT11O96014 354 aa8.67□□□□□ -1.02
PRPF40A-205ENST00000467114 CTSBP07858 339 aa8.67□□□□□ -1.02
PRPF40A-205ENST00000467114 ADH5P11766 374 aa8.67□□□□□ -1.02
PRPF40A-205ENST00000467114 ITPKAP23677 461 aa8.67□□□□□ -1.02
PRPF40A-205ENST00000467114 MAOBP27338 520 aa8.67□□□□□ -1.02
PRPF40A-205ENST00000467114 NFKBIBQ15653 356 aa8.67□□□□□ -1.02
PRPF40A-205ENST00000467114 ZFYVE1Q9HBF4 777 aa8.67□□□□□ -1.02
PRPF40A-205ENST00000467114 LEMD3Q9Y2U8 911 aa8.67□□□□□ -1.02
PRPF40A-205ENST00000467114 B3GALT4O96024 378 aa8.66□□□□□ -1.02
PRPF40A-205ENST00000467114 ORC1Q13415 861 aa8.66□□□□□ -1.02
PRPF40A-205ENST00000467114 POU4F3Q15319 338 aa8.66□□□□□ -1.02
PRPF40A-205ENST00000467114 HP1BP3Q5SSJ5 553 aaPredicted RBP8.66□□□□□ -1.02
PRPF40A-205ENST00000467114 TXNDC2Q86VQ3 553 aa8.66□□□□□ -1.02
PRPF40A-205ENST00000467114 FBXL6Q8N531 539 aa8.66□□□□□ -1.02
PRPF40A-205ENST00000467114 TRIM56Q9BRZ2 755 aaKnown RBP8.66□□□□□ -1.02
PRPF40A-205ENST00000467114 YIPF2Q9BWQ6 316 aa8.66□□□□□ -1.02
PRPF40A-205ENST00000467114 OSBPL1AQ9BXW6 950 aa8.66□□□□□ -1.02
PRPF40A-205ENST00000467114 ZNF576Q9H609 170 aa8.66□□□□□ -1.02
PRPF40A-205ENST00000467114 CPNE3O75131 537 aaKnown RBP8.65□□□□□ -1.02
PRPF40A-205ENST00000467114 IGHA2P01877 340 aa8.65□□□□□ -1.02
PRPF40A-205ENST00000467114 FOSL1P15407 271 aa8.65□□□□□ -1.02
PRPF40A-205ENST00000467114 MSMPQ1L6U9 139 aa8.65□□□□□ -1.02
PRPF40A-205ENST00000467114 SHISA5Q8N114 240 aa8.65□□□□□ -1.02
PRPF40A-205ENST00000467114 PAX4O43316 350 aa8.64□□□□□ -1.03
PRPF40A-205ENST00000467114 PTPN12Q05209 780 aaKnown RBP8.64□□□□□ -1.03
PRPF40A-205ENST00000467114 KRTAP1-3Q8IUG1 177 aa8.64□□□□□ -1.03
PRPF40A-205ENST00000467114 DDX54Q8TDD1 881 aaKnown RBP8.64□□□□□ -1.03
PRPF40A-205ENST00000467114 METTL22Q9BUU2 404 aaPredicted RBP8.64□□□□□ -1.03
PRPF40A-205ENST00000467114 EHD4Q9H223 541 aa8.64□□□□□ -1.03
PRPF40A-205ENST00000467114 NPHS2Q9NP85 383 aa8.64□□□□□ -1.03
PRPF40A-205ENST00000467114 PRKAG2Q9UGJ0 569 aa8.64□□□□□ -1.03
PRPF40A-205ENST00000467114 ACTL7BQ9Y614 415 aa8.64□□□□□ -1.03
PRPF40A-205ENST00000467114 TAL1P17542 331 aaPredicted RBP8.63□□□□□ -1.03
PRPF40A-205ENST00000467114 ZAR1Q86SH2 424 aa8.63□□□□□ -1.03
PRPF40A-205ENST00000467114 GATA6Q92908 595 aa8.63□□□□□ -1.03
PRPF40A-205ENST00000467114 FMNL2Q96PY5 1086 aa8.63□□□□□ -1.03
PRPF40A-205ENST00000467114 DNAJC25Q9H1X3 360 aa8.63□□□□□ -1.03
PRPF40A-205ENST00000467114 GSX1Q9H4S2 264 aaPredicted RBP8.63□□□□□ -1.03
PRPF40A-205ENST00000467114 ADMP35318 185 aa8.62□□□□□ -1.03
PRPF40A-205ENST00000467114 LCE3BQ5TA77 95 aa8.62□□□□□ -1.03
PRPF40A-205ENST00000467114 PRPF40BQ6NWY9 871 aaKnown RBP8.62□□□□□ -1.03
PRPF40A-205ENST00000467114 KRTAP19-1Q8IUB9 90 aa8.62□□□□□ -1.03
PRPF40A-205ENST00000467114 CCDC74AQ96AQ1 378 aa8.62□□□□□ -1.03
PRPF40A-205ENST00000467114 TBC1D32Q96NH3 1257 aa8.62□□□□□ -1.03
PRPF40A-205ENST00000467114 CORO1BQ9BR76 489 aa8.62□□□□□ -1.03
PRPF40A-205ENST00000467114 ABCB6Q9NP58 842 aa8.62□□□□□ -1.03
PRPF40A-205ENST00000467114 SYNGAP1Q96PV0 1343 aa8.61□□□□□ -1.03
PRPF40A-205ENST00000467114 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.61□□□□□ -1.03
PRPF40A-205ENST00000467114 GPR182O15218 404 aa8.61□□□□□ -1.03
PRPF40A-205ENST00000467114 ECEL1O95672 775 aa8.61□□□□□ -1.03
PRPF40A-205ENST00000467114 PRNPP04156 253 aa8.61□□□□□ -1.03
PRPF40A-205ENST00000467114 AKAP4Q5JQC9 854 aa8.61□□□□□ -1.03
PRPF40A-205ENST00000467114 ACSS3Q9H6R3 686 aa8.61□□□□□ -1.03
PRPF40A-205ENST00000467114 GOLGA2P5Q9HBQ8 144 aa8.61□□□□□ -1.03
PRPF40A-205ENST00000467114 EIF1AYO14602 144 aaKnown RBP8.6□□□□□ -1.03
PRPF40A-205ENST00000467114 NFICP08651 508 aa8.6□□□□□ -1.03
PRPF40A-205ENST00000467114 MAP7Q14244 749 aa8.6□□□□□ -1.03
PRPF40A-205ENST00000467114 RPS26P11Q5JNZ5 115 aaPredicted RBP8.6□□□□□ -1.03
PRPF40A-205ENST00000467114 SEMA6CQ9H3T2 930 aa8.6□□□□□ -1.03
PRPF40A-205ENST00000467114 RAD18Q9NS91 495 aa8.6□□□□□ -1.03
PRPF40A-205ENST00000467114 FAM105AQ9NUU6 356 aa8.6□□□□□ -1.03
PRPF40A-205ENST00000467114 ADGRE2Q9UHX3 823 aa8.6□□□□□ -1.03
PRPF40A-205ENST00000467114 AP3B2Q13367 1082 aa8.59□□□□□ -1.03
PRPF40A-205ENST00000467114 DYMQ7RTS9 669 aa8.59□□□□□ -1.03
PRPF40A-205ENST00000467114 ALKBH8Q96BT7 664 aaKnown RBP8.59□□□□□ -1.03
PRPF40A-205ENST00000467114 NIF3L1Q9GZT8 377 aa8.59□□□□□ -1.03
PRPF40A-205ENST00000467114 CCDC39Q9UFE4 941 aa8.59□□□□□ -1.03
PRPF40A-205ENST00000467114 TMEM238LA0A1B0GVL6 79 aa8.58□□□□□ -1.04
PRPF40A-205ENST00000467114 FAM170BA6NMN3 283 aa8.58□□□□□ -1.04
PRPF40A-205ENST00000467114 CYP26A1O43174 497 aa8.58□□□□□ -1.04
PRPF40A-205ENST00000467114 AOC2O75106 756 aa8.58□□□□□ -1.04
PRPF40A-205ENST00000467114 RAB6AP20340 208 aa8.58□□□□□ -1.04
PRPF40A-205ENST00000467114 SEZ6L2Q6UXD5 910 aa8.58□□□□□ -1.04
PRPF40A-205ENST00000467114 RETREG2Q8NC44 543 aa8.58□□□□□ -1.04
PRPF40A-205ENST00000467114 DMRTB1Q96MA1 342 aa8.58□□□□□ -1.04
PRPF40A-205ENST00000467114 WDR18Q9BV38 432 aa8.58□□□□□ -1.04
PRPF40A-205ENST00000467114 RBCK1Q9BYM8 510 aa8.58□□□□□ -1.04
PRPF40A-205ENST00000467114 ANGEL1Q9UNK9 670 aaKnown RBP8.58□□□□□ -1.04
PRPF40A-205ENST00000467114 AP4E1Q9UPM8 1137 aa8.58□□□□□ -1.04
PRPF40A-205ENST00000467114 TXKP42681 527 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms