RNA–Protein interactions for RNA: ENST00000466410.5

LIMS2-212, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-212ENST00000466410 SF3A1Q15459 793 aaKnown RBP22.57■■□□□ 1.2
LIMS2-212ENST00000466410 KIF28PB7ZC32 967 aa22.56■■□□□ 1.2
LIMS2-212ENST00000466410 MYSM1Q5VVJ2 828 aa22.56■■□□□ 1.2
LIMS2-212ENST00000466410 NLRP10Q86W26 655 aa22.56■■□□□ 1.2
LIMS2-212ENST00000466410 TEX13AQ9BXU3 409 aaPredicted RBP22.56■■□□□ 1.2
LIMS2-212ENST00000466410 STARD3NLO95772 234 aa22.56■■□□□ 1.2
LIMS2-212ENST00000466410 ADD2P35612 726 aa22.56■■□□□ 1.2
LIMS2-212ENST00000466410 LRRC8AQ8IWT6 810 aa22.56■■□□□ 1.2
LIMS2-212ENST00000466410 CEP57L1Q8IYX8 460 aa22.56■■□□□ 1.2
LIMS2-212ENST00000466410 AOPEPQ8N6M6 819 aa22.56■■□□□ 1.2
LIMS2-212ENST00000466410 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.56■■□□□ 1.2
LIMS2-212ENST00000466410 POLR3EQ9NVU0 708 aa22.56■■□□□ 1.2
LIMS2-212ENST00000466410 SLC9C2Q5TAH2 1124 aa22.55■■□□□ 1.2
LIMS2-212ENST00000466410 KCNG4Q8TDN1 519 aa22.55■■□□□ 1.2
LIMS2-212ENST00000466410 CNNM1Q9NRU3 951 aa22.55■■□□□ 1.2
LIMS2-212ENST00000466410 DDX60Q8IY21 1712 aaKnown RBP22.55■■□□□ 1.2
LIMS2-212ENST00000466410 NHSL1Q5SYE7 1610 aa22.54■■□□□ 1.2
LIMS2-212ENST00000466410 SPTLC2O15270 562 aa22.54■■□□□ 1.2
LIMS2-212ENST00000466410 YEATS4O95619 227 aa22.54■■□□□ 1.2
LIMS2-212ENST00000466410 CDHR2Q9BYE9 1310 aa22.54■■□□□ 1.2
LIMS2-212ENST00000466410 BRAPQ7Z569 592 aa22.54■■□□□ 1.2
LIMS2-212ENST00000466410 TBC1D10CQ8IV04 446 aa22.54■■□□□ 1.2
LIMS2-212ENST00000466410 PIH1D3Q9NQM4 214 aaKnown RBP22.54■■□□□ 1.2
LIMS2-212ENST00000466410 CTSWP56202 376 aa22.53■■□□□ 1.2
LIMS2-212ENST00000466410 MYO5AQ9Y4I1 1855 aaKnown RBP22.53■■□□□ 1.2
LIMS2-212ENST00000466410 NEDD4P46934 1319 aa22.53■■□□□ 1.2
LIMS2-212ENST00000466410 WDR19Q8NEZ3 1342 aa22.53■■□□□ 1.2
LIMS2-212ENST00000466410 TNNT1P13805 278 aa22.53■■□□□ 1.2
LIMS2-212ENST00000466410 KIF23Q02241 960 aaPredicted RBP22.53■■□□□ 1.2
LIMS2-212ENST00000466410 CYB5R4Q7L1T6 521 aa22.53■■□□□ 1.2
LIMS2-212ENST00000466410 VGLL2Q8N8G2 317 aa22.53■■□□□ 1.2
LIMS2-212ENST00000466410 KIAA1468Q9P260 1216 aa22.53■■□□□ 1.2
LIMS2-212ENST00000466410 ANKRD18BA2A2Z9 1011 aa22.52■■□□□ 1.2
LIMS2-212ENST00000466410 IDH1O75874 414 aaKnown RBP22.52■■□□□ 1.2
LIMS2-212ENST00000466410 AIFM3Q96NN9 605 aa22.52■■□□□ 1.2
LIMS2-212ENST00000466410 ZMYND15Q9H091 742 aa22.52■■□□□ 1.2
LIMS2-212ENST00000466410 CTIFO43310 598 aaKnown RBP22.52■■□□□ 1.2
LIMS2-212ENST00000466410 TRDNQ13061 729 aa22.52■■□□□ 1.2
LIMS2-212ENST00000466410 DPCR1Q3MIW9 517 aa22.52■■□□□ 1.2
LIMS2-212ENST00000466410 SYNE3Q6ZMZ3 975 aa22.52■■□□□ 1.2
LIMS2-212ENST00000466410 FILIP1Q7Z7B0 1213 aa22.52■■□□□ 1.2
LIMS2-212ENST00000466410 CCDC94Q9BW85 323 aaPredicted RBP22.52■■□□□ 1.2
LIMS2-212ENST00000466410 NAT10Q9H0A0 1025 aaKnown RBP22.52■■□□□ 1.2
LIMS2-212ENST00000466410 IRS4O14654 1257 aaPredicted RBP22.51■■□□□ 1.19
LIMS2-212ENST00000466410 APPP05067 770 aa22.51■■□□□ 1.19
LIMS2-212ENST00000466410 RXRAP19793 462 aa22.51■■□□□ 1.19
LIMS2-212ENST00000466410 TPD52L1Q16890 204 aaPredicted RBP22.51■■□□□ 1.19
LIMS2-212ENST00000466410 ANGEL1Q9UNK9 670 aaKnown RBP22.51■■□□□ 1.19
LIMS2-212ENST00000466410 ANO1Q5XXA6 986 aa22.51■■□□□ 1.19
LIMS2-212ENST00000466410 ZNF512BQ96KM6 892 aaPredicted RBP22.51■■□□□ 1.19
LIMS2-212ENST00000466410 KAT6BQ8WYB5 2073 aa22.51■■□□□ 1.19
LIMS2-212ENST00000466410 C4AP0C0L4 1744 aa22.51■■□□□ 1.19
LIMS2-212ENST00000466410 C4BP0C0L5 1744 aa22.51■■□□□ 1.19
LIMS2-212ENST00000466410 PHKA1P46020 1223 aa22.5■■□□□ 1.19
LIMS2-212ENST00000466410 AXDND1Q5T1B0 1012 aaPredicted RBP22.5■■□□□ 1.19
LIMS2-212ENST00000466410 SLC4A9Q96Q91 983 aa22.5■■□□□ 1.19
LIMS2-212ENST00000466410 SENP2Q9HC62 589 aa22.5■■□□□ 1.19
LIMS2-212ENST00000466410 ZNF532Q9HCE3 1301 aa22.5■■□□□ 1.19
LIMS2-212ENST00000466410 ZMYM6O95789 1325 aa22.5■■□□□ 1.19
LIMS2-212ENST00000466410 ZNF202O95125 648 aa22.49■■□□□ 1.19
LIMS2-212ENST00000466410 PDE8BO95263 885 aa22.49■■□□□ 1.19
LIMS2-212ENST00000466410 RBM6P78332 1123 aaKnown RBP22.49■■□□□ 1.19
LIMS2-212ENST00000466410 TTF1Q15361 905 aaPredicted RBP22.49■■□□□ 1.19
LIMS2-212ENST00000466410 TRMT112Q9UI30 125 aaKnown RBP22.49■■□□□ 1.19
LIMS2-212ENST00000466410 TAOK2Q9UL54 1235 aa22.49■■□□□ 1.19
LIMS2-212ENST00000466410 CCDC69A6NI79 296 aa22.49■■□□□ 1.19
LIMS2-212ENST00000466410 USP27XA6NNY8 438 aa22.49■■□□□ 1.19
LIMS2-212ENST00000466410 SH2B2O14492 632 aaPredicted RBP22.49■■□□□ 1.19
LIMS2-212ENST00000466410 SKILP12757 684 aa22.49■■□□□ 1.19
LIMS2-212ENST00000466410 CCDC102BQ68D86 513 aa22.49■■□□□ 1.19
LIMS2-212ENST00000466410 WWC3Q9ULE0 1092 aa22.49■■□□□ 1.19
LIMS2-212ENST00000466410 ATRNO75882 1429 aa22.49■■□□□ 1.19
LIMS2-212ENST00000466410 B4E1Z4 1266 aa22.48■■□□□ 1.19
LIMS2-212ENST00000466410 BIN1O00499 593 aa22.48■■□□□ 1.19
LIMS2-212ENST00000466410 NEMFO60524 1076 aa22.48■■□□□ 1.19
LIMS2-212ENST00000466410 WDHD1O75717 1129 aaPredicted RBP22.48■■□□□ 1.19
LIMS2-212ENST00000466410 METAP2P50579 478 aaKnown RBP eCLIP22.48■■□□□ 1.19
LIMS2-212ENST00000466410 UBE3CQ15386 1083 aa22.48■■□□□ 1.19
LIMS2-212ENST00000466410 ALG1Q9BT22 464 aa22.48■■□□□ 1.19
LIMS2-212ENST00000466410 SMTNL1A8MU46 457 aa22.48■■□□□ 1.19
LIMS2-212ENST00000466410 SLC3A2P08195 630 aaKnown RBP22.48■■□□□ 1.19
LIMS2-212ENST00000466410 CYP19A1P11511 503 aaPredicted RBP22.48■■□□□ 1.19
LIMS2-212ENST00000466410 PDE6AP16499 860 aa22.48■■□□□ 1.19
LIMS2-212ENST00000466410 MARCKSP29966 332 aaPredicted RBP22.48■■□□□ 1.19
LIMS2-212ENST00000466410 ZBTB1Q9Y2K1 713 aa22.48■■□□□ 1.19
LIMS2-212ENST00000466410 MROH7-TTC4A0A0A0MT08 1334 aa22.47■■□□□ 1.19
LIMS2-212ENST00000466410 MYH3P11055 1940 aa22.47■■□□□ 1.19
LIMS2-212ENST00000466410 PFKFB1P16118 471 aa22.47■■□□□ 1.19
LIMS2-212ENST00000466410 CDC27P30260 824 aa22.47■■□□□ 1.19
LIMS2-212ENST00000466410 CCZ1BP86790 482 aa22.47■■□□□ 1.19
LIMS2-212ENST00000466410 CCZ1P86791 482 aaPredicted RBP22.47■■□□□ 1.19
LIMS2-212ENST00000466410 ZRSR1Q15695 479 aaKnown RBP22.47■■□□□ 1.19
LIMS2-212ENST00000466410 APOA5Q6Q788 366 aa22.47■■□□□ 1.19
LIMS2-212ENST00000466410 NBPF11Q86T75 865 aa22.47■■□□□ 1.19
LIMS2-212ENST00000466410 HELBQ8NG08 1087 aaPredicted RBP22.47■■□□□ 1.19
LIMS2-212ENST00000466410 ANKRD7Q92527 254 aa22.47■■□□□ 1.19
LIMS2-212ENST00000466410 PHKBQ93100 1093 aa22.47■■□□□ 1.19
LIMS2-212ENST00000466410 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.47■■□□□ 1.19
LIMS2-212ENST00000466410 INCENPQ9NQS7 918 aa22.47■■□□□ 1.19
LIMS2-212ENST00000466410 ITGB4P16144 1822 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 1123.5 ms