RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 ACSBG1Q96GR2 724 aa12.15□□□□□ -0.46
UFD1-206ENST00000466373 SEC31BQ9NQW1 1179 aa12.15□□□□□ -0.46
UFD1-206ENST00000466373 MYH15Q9Y2K3 1946 aa12.15□□□□□ -0.46
UFD1-206ENST00000466373 BECN2A8MW95 431 aa12.15□□□□□ -0.46
UFD1-206ENST00000466373 DHX16O60231 1041 aaKnown RBP12.15□□□□□ -0.46
UFD1-206ENST00000466373 NDUFA8P51970 172 aa12.15□□□□□ -0.46
UFD1-206ENST00000466373 AIDAQ96BJ3 306 aa12.15□□□□□ -0.46
UFD1-206ENST00000466373 SPTLC3Q9NUV7 552 aa12.15□□□□□ -0.46
UFD1-206ENST00000466373 CLIP2Q9UDT6 1046 aa12.15□□□□□ -0.46
UFD1-206ENST00000466373 BCL9O00512 1426 aa12.15□□□□□ -0.47
UFD1-206ENST00000466373 ZSCAN25Q6NSZ9 544 aa12.14□□□□□ -0.47
UFD1-206ENST00000466373 PLA2G4DQ86XP0 818 aa12.14□□□□□ -0.47
UFD1-206ENST00000466373 MYH7P12883 1935 aa12.14□□□□□ -0.47
UFD1-206ENST00000466373 UBE2Q2LH0YL09 131 aa12.14□□□□□ -0.47
UFD1-206ENST00000466373 IQCB1Q15051 598 aa12.14□□□□□ -0.47
UFD1-206ENST00000466373 STX1AQ16623 288 aa12.14□□□□□ -0.47
UFD1-206ENST00000466373 CCDC144BQ3MJ40 725 aa12.14□□□□□ -0.47
UFD1-206ENST00000466373 MAGEB6Q8N7X4 407 aa12.14□□□□□ -0.47
UFD1-206ENST00000466373 LINC00301Q8NCQ3 95 aa12.14□□□□□ -0.47
UFD1-206ENST00000466373 MRPS27Q92552 414 aaKnown RBP12.14□□□□□ -0.47
UFD1-206ENST00000466373 STRCQ7RTU9 1775 aa12.14□□□□□ -0.47
UFD1-206ENST00000466373 MARCKSP29966 332 aaPredicted RBP12.14□□□□□ -0.47
UFD1-206ENST00000466373 FBXL16Q8N461 479 aa12.14□□□□□ -0.47
UFD1-206ENST00000466373 RTEL1Q9NZ71 1219 aa12.14□□□□□ -0.47
UFD1-206ENST00000466373 ANGEL1Q9UNK9 670 aaKnown RBP12.14□□□□□ -0.47
UFD1-206ENST00000466373 METAP2P50579 478 aaKnown RBP eCLIP12.13□□□□□ -0.47
UFD1-206ENST00000466373 CTDSPL2Q05D32 466 aa12.13□□□□□ -0.47
UFD1-206ENST00000466373 ARID5BQ14865 1188 aa12.13□□□□□ -0.47
UFD1-206ENST00000466373 TTF1Q15361 905 aaPredicted RBP12.13□□□□□ -0.47
UFD1-206ENST00000466373 MYSM1Q5VVJ2 828 aa12.13□□□□□ -0.47
UFD1-206ENST00000466373 SUSD4Q5VX71 490 aa12.13□□□□□ -0.47
UFD1-206ENST00000466373 SYNE3Q6ZMZ3 975 aa12.13□□□□□ -0.47
UFD1-206ENST00000466373 NFXL1Q6ZNB6 911 aa12.13□□□□□ -0.47
UFD1-206ENST00000466373 NEDD4P46934 1319 aa12.13□□□□□ -0.47
UFD1-206ENST00000466373 BIN1O00499 593 aa12.13□□□□□ -0.47
UFD1-206ENST00000466373 DYNC1I1O14576 645 aa12.13□□□□□ -0.47
UFD1-206ENST00000466373 CTAGE5O15320 804 aa12.13□□□□□ -0.47
UFD1-206ENST00000466373 TPM3P06753 285 aa12.13□□□□□ -0.47
UFD1-206ENST00000466373 PUM3Q15397 648 aaKnown RBP12.13□□□□□ -0.47
UFD1-206ENST00000466373 ADALQ6DHV7 355 aa12.13□□□□□ -0.47
UFD1-206ENST00000466373 FMR1NBQ8N0W7 255 aaPredicted RBP12.13□□□□□ -0.47
UFD1-206ENST00000466373 MYRIPQ8NFW9 859 aa12.13□□□□□ -0.47
UFD1-206ENST00000466373 MPHOSPH8Q99549 860 aa12.13□□□□□ -0.47
UFD1-206ENST00000466373 ARMT1Q9H993 441 aa12.13□□□□□ -0.47
UFD1-206ENST00000466373 IQSEC3Q9UPP2 1182 aaPredicted RBP12.13□□□□□ -0.47
UFD1-206ENST00000466373 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.13□□□□□ -0.47
UFD1-206ENST00000466373 SPTLC2O15270 562 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 MBD4O95243 580 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 ADAMTS2O95450 1211 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 CDC27P30260 824 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 RASGRF1Q13972 1273 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 UBE3CQ15386 1083 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 RRP12Q5JTH9 1297 aaKnown RBP12.12□□□□□ -0.47
UFD1-206ENST00000466373 ATL3Q6DD88 541 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 ISM2Q6H9L7 571 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 SPATA5Q8NB90 893 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 CHMP4CQ96CF2 233 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 TOMM22Q9NS69 142 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 NUP98P52948 1817 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 IL6STP40189 918 aaPredicted RBP12.12□□□□□ -0.47
UFD1-206ENST00000466373 AOPEPQ8N6M6 819 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 CACTINQ8WUQ7 758 aaKnown RBP12.12□□□□□ -0.47
UFD1-206ENST00000466373 LPIN2Q92539 896 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 STRBPQ96SI9 672 aaKnown RBP12.12□□□□□ -0.47
UFD1-206ENST00000466373 ALG1Q9BT22 464 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 PDCL3Q9H2J4 239 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 MYH3P11055 1940 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 PRKAB2O43741 272 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 KIF23Q02241 960 aaPredicted RBP12.12□□□□□ -0.47
UFD1-206ENST00000466373 APOA5Q6Q788 366 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 FILIP1Q7Z7B0 1213 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 DHX40Q8IX18 779 aaKnown RBP12.12□□□□□ -0.47
UFD1-206ENST00000466373 ZNF34Q8IZ26 560 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 C16orf45Q96MC5 204 aaPredicted RBP12.12□□□□□ -0.47
UFD1-206ENST00000466373 ZKSCAN3Q9BRR0 538 aa12.12□□□□□ -0.47
UFD1-206ENST00000466373 ABCC12Q96J65 1359 aa12.11□□□□□ -0.47
UFD1-206ENST00000466373 TCRBV5S4A2TA0A5A2 114 aa12.11□□□□□ -0.47
UFD1-206ENST00000466373 SH2B2O14492 632 aaPredicted RBP12.11□□□□□ -0.47
UFD1-206ENST00000466373 ARID4AP29374 1257 aaPredicted RBP12.11□□□□□ -0.47
UFD1-206ENST00000466373 ATP6V1AP38606 617 aa12.11□□□□□ -0.47
UFD1-206ENST00000466373 BCAMP50895 628 aa12.11□□□□□ -0.47
UFD1-206ENST00000466373 GNL2Q13823 731 aaKnown RBP12.11□□□□□ -0.47
UFD1-206ENST00000466373 CCDC82Q8N4S0 544 aa12.11□□□□□ -0.47
UFD1-206ENST00000466373 MIGA1Q8NAN2 632 aa12.11□□□□□ -0.47
UFD1-206ENST00000466373 NAPBQ9H115 298 aa12.11□□□□□ -0.47
UFD1-206ENST00000466373 ANO10Q9NW15 660 aa12.11□□□□□ -0.47
UFD1-206ENST00000466373 UQCRFS1P1P0C7P4 283 aa12.11□□□□□ -0.47
UFD1-206ENST00000466373 TMEM67Q5HYA8 995 aa12.11□□□□□ -0.47
UFD1-206ENST00000466373 EPB41L4AQ9HCS5 686 aaPredicted RBP12.11□□□□□ -0.47
UFD1-206ENST00000466373 ERVV-1B6SEH8 477 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 ZRSR1Q15695 479 aaKnown RBP12.1□□□□□ -0.47
UFD1-206ENST00000466373 DPCR1Q3MIW9 517 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 ANO1Q5XXA6 986 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 VPS37DQ86XT2 251 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 IFNL3Q8IZI9 196 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 KCNG4Q8TDN1 519 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 PRIMPOLQ96LW4 560 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 BCL11BQ9C0K0 894 aaPredicted RBP12.1□□□□□ -0.47
UFD1-206ENST00000466373 POLR3EQ9NVU0 708 aa12.1□□□□□ -0.47
UFD1-206ENST00000466373 ZSWIM5Q9P217 1185 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms