RNA–Protein interactions for RNA: ENST00000466138.1

CSF3R-208, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 3

Gene CSF3R, Length 335 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-208ENST00000466138 ANKIB1Q9P2G1 1089 aa13.74□□□□□ -0.21
CSF3R-208ENST00000466138 PRKAG2Q9UGJ0 569 aa13.74□□□□□ -0.21
CSF3R-208ENST00000466138 COL3A1P02461 1466 aaPredicted RBP13.74□□□□□ -0.21
CSF3R-208ENST00000466138 PRR33A8MZF0 331 aa13.73□□□□□ -0.21
CSF3R-208ENST00000466138 IL13P35225 146 aa13.73□□□□□ -0.21
CSF3R-208ENST00000466138 TRIM32Q13049 653 aa13.73□□□□□ -0.21
CSF3R-208ENST00000466138 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.73□□□□□ -0.21
CSF3R-208ENST00000466138 PCDHAC2Q9Y5I4 1007 aa13.73□□□□□ -0.21
CSF3R-208ENST00000466138 U2AF1L5P0DN76 240 aaPredicted RBP13.72□□□□□ -0.21
CSF3R-208ENST00000466138 DNAJB2P25686 324 aa13.72□□□□□ -0.21
CSF3R-208ENST00000466138 U2AF1Q01081 240 aaKnown RBP eCLIP13.72□□□□□ -0.21
CSF3R-208ENST00000466138 KCTD2Q14681 263 aa13.72□□□□□ -0.21
CSF3R-208ENST00000466138 PARP10Q53GL7 1025 aa13.72□□□□□ -0.21
CSF3R-208ENST00000466138 AKNAD1Q5T1N1 836 aa13.72□□□□□ -0.21
CSF3R-208ENST00000466138 PXYLP1Q8TE99 480 aa13.72□□□□□ -0.21
CSF3R-208ENST00000466138 ANKS1AQ92625 1134 aa13.72□□□□□ -0.21
CSF3R-208ENST00000466138 CXXC1Q9P0U4 656 aaPredicted RBP13.72□□□□□ -0.21
CSF3R-208ENST00000466138 OTOFQ9HC10 1997 aa13.72□□□□□ -0.21
CSF3R-208ENST00000466138 COL4A1P02462 1669 aa13.72□□□□□ -0.21
CSF3R-208ENST00000466138 ADGRE1Q14246 886 aa13.71□□□□□ -0.21
CSF3R-208ENST00000466138 SKIV2LQ15477 1246 aaKnown RBP13.71□□□□□ -0.21
CSF3R-208ENST00000466138 PNISRQ8TF01 805 aaKnown RBP13.71□□□□□ -0.21
CSF3R-208ENST00000466138 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.21
CSF3R-208ENST00000466138 GGA1Q9UJY5 639 aa13.71□□□□□ -0.21
CSF3R-208ENST00000466138 COL1A1P02452 1464 aaPredicted RBP13.71□□□□□ -0.21
CSF3R-208ENST00000466138 PDHXO00330 501 aa13.7□□□□□ -0.22
CSF3R-208ENST00000466138 ATN1P54259 1190 aaPredicted RBP13.7□□□□□ -0.22
CSF3R-208ENST00000466138 COL9A2Q14055 689 aaPredicted RBP13.7□□□□□ -0.22
CSF3R-208ENST00000466138 CSPP1Q1MSJ5 1256 aa13.7□□□□□ -0.22
CSF3R-208ENST00000466138 DACT2Q5SW24 774 aa13.7□□□□□ -0.22
CSF3R-208ENST00000466138 RNPC3Q96LT9 517 aaKnown RBP13.7□□□□□ -0.22
CSF3R-208ENST00000466138 PRDM5Q9NQX1 630 aaPredicted RBP13.7□□□□□ -0.22
CSF3R-208ENST00000466138 CSADQ9Y600 493 aa13.7□□□□□ -0.22
CSF3R-208ENST00000466138 GNAT3A8MTJ3 354 aa13.69□□□□□ -0.22
CSF3R-208ENST00000466138 PI4K2BG5E9Z4 385 aa13.69□□□□□ -0.22
CSF3R-208ENST00000466138 TNPO2O14787 897 aaKnown RBP13.69□□□□□ -0.22
CSF3R-208ENST00000466138 GIGYF2Q6Y7W6 1299 aaKnown RBP13.69□□□□□ -0.22
CSF3R-208ENST00000466138 BADQ92934 168 aa13.69□□□□□ -0.22
CSF3R-208ENST00000466138 MRS2Q9HD23 443 aa13.69□□□□□ -0.22
CSF3R-208ENST00000466138 HMX1Q9NP08 348 aaPredicted RBP13.69□□□□□ -0.22
CSF3R-208ENST00000466138 PPP2R3BQ9Y5P8 575 aa13.69□□□□□ -0.22
CSF3R-208ENST00000466138 ZFHX4Q86UP3 3567 aa13.69□□□□□ -0.22
CSF3R-208ENST00000466138 IRF6O14896 467 aa13.68□□□□□ -0.22
CSF3R-208ENST00000466138 MAP3K9P80192 1104 aa13.68□□□□□ -0.22
CSF3R-208ENST00000466138 SNAPC2Q13487 334 aa13.68□□□□□ -0.22
CSF3R-208ENST00000466138 DLGAP5Q15398 846 aa13.68□□□□□ -0.22
CSF3R-208ENST00000466138 CDAN1Q8IWY9 1227 aa13.68□□□□□ -0.22
CSF3R-208ENST00000466138 TIFAQ96CG3 184 aa13.68□□□□□ -0.22
CSF3R-208ENST00000466138 ZCCHC17Q9NP64 241 aaKnown RBP13.68□□□□□ -0.22
CSF3R-208ENST00000466138 TRMT112Q9UI30 125 aaKnown RBP13.68□□□□□ -0.22
CSF3R-208ENST00000466138 OGDHLQ9ULD0 1010 aa13.68□□□□□ -0.22
CSF3R-208ENST00000466138 XIRP2A4UGR9 3374 aa13.68□□□□□ -0.22
CSF3R-208ENST00000466138 ANKRD36CQ5JPF3 1778 aa13.68□□□□□ -0.22
CSF3R-208ENST00000466138 BAHCC1Q9P281 2608 aa13.67□□□□□ -0.22
CSF3R-208ENST00000466138 CYP2C8P10632 490 aa13.67□□□□□ -0.22
CSF3R-208ENST00000466138 RASA3Q14644 834 aa13.67□□□□□ -0.22
CSF3R-208ENST00000466138 AAK1Q2M2I8 961 aa13.67□□□□□ -0.22
CSF3R-208ENST00000466138 RIC3Q7Z5B4 369 aa13.67□□□□□ -0.22
CSF3R-208ENST00000466138 ZBED3Q96IU2 234 aaPredicted RBP13.67□□□□□ -0.22
CSF3R-208ENST00000466138 SIPA1L3O60292 1781 aaPredicted RBP13.67□□□□□ -0.22
CSF3R-208ENST00000466138 PKD1L2Q7Z442 2459 aa13.66□□□□□ -0.22
CSF3R-208ENST00000466138 CACNA1BQ00975 2339 aa13.66□□□□□ -0.22
CSF3R-208ENST00000466138 GFRA3O60609 400 aa13.66□□□□□ -0.22
CSF3R-208ENST00000466138 DIAPH1O60610 1272 aaKnown RBP13.66□□□□□ -0.22
CSF3R-208ENST00000466138 COL6A1P12109 1028 aa13.66□□□□□ -0.22
CSF3R-208ENST00000466138 ITGB8P26012 769 aa13.66□□□□□ -0.22
CSF3R-208ENST00000466138 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.66□□□□□ -0.22
CSF3R-208ENST00000466138 CFAP53Q96M91 514 aa13.66□□□□□ -0.22
CSF3R-208ENST00000466138 SENP6Q9GZR1 1112 aaPredicted RBP13.66□□□□□ -0.22
CSF3R-208ENST00000466138 PSME4Q14997 1843 aa13.66□□□□□ -0.22
CSF3R-208ENST00000466138 CFAP54Q96N23 3096 aa13.66□□□□□ -0.22
CSF3R-208ENST00000466138 USP34Q70CQ2 3546 aa13.66□□□□□ -0.22
CSF3R-208ENST00000466138 WDFY4Q6ZS81 3184 aa13.66□□□□□ -0.22
CSF3R-208ENST00000466138 ZNF804BA4D1E1 1349 aa13.65□□□□□ -0.22
CSF3R-208ENST00000466138 AOX1Q06278 1338 aa13.65□□□□□ -0.22
CSF3R-208ENST00000466138 ZDBF2Q9HCK1 2354 aa13.65□□□□□ -0.22
CSF3R-208ENST00000466138 IRF5Q13568 498 aa13.65□□□□□ -0.22
CSF3R-208ENST00000466138 CD320Q9NPF0 282 aa13.65□□□□□ -0.22
CSF3R-208ENST00000466138 SPDYE5A6NIY4 337 aa13.64□□□□□ -0.23
CSF3R-208ENST00000466138 F8W031 263 aaPredicted RBP13.64□□□□□ -0.23
CSF3R-208ENST00000466138 BCRP11274 1271 aa13.64□□□□□ -0.23
CSF3R-208ENST00000466138 MTMR14Q8NCE2 650 aa13.64□□□□□ -0.23
CSF3R-208ENST00000466138 ADAMTS8Q9UP79 889 aa13.64□□□□□ -0.23
CSF3R-208ENST00000466138 ATP11BQ9Y2G3 1177 aa13.64□□□□□ -0.23
CSF3R-208ENST00000466138 MGAMO43451 1857 aa13.63□□□□□ -0.23
CSF3R-208ENST00000466138 HMGCRP04035 888 aa13.63□□□□□ -0.23
CSF3R-208ENST00000466138 PBX2P40425 430 aa13.63□□□□□ -0.23
CSF3R-208ENST00000466138 RPS8P62241 208 aaKnown RBP13.63□□□□□ -0.23
CSF3R-208ENST00000466138 PODXL2Q9NZ53 605 aa13.63□□□□□ -0.23
CSF3R-208ENST00000466138 SNCAIPQ9Y6H5 919 aa13.63□□□□□ -0.23
CSF3R-208ENST00000466138 SH3TC1Q8TE82 1336 aa13.63□□□□□ -0.23
CSF3R-208ENST00000466138 MYO3BQ8WXR4 1341 aa13.63□□□□□ -0.23
CSF3R-208ENST00000466138 MYO1BO43795 1136 aa13.62□□□□□ -0.23
CSF3R-208ENST00000466138 RTL5Q5HYW3 569 aaPredicted RBP13.62□□□□□ -0.23
CSF3R-208ENST00000466138 ERMP1Q7Z2K6 904 aa13.62□□□□□ -0.23
CSF3R-208ENST00000466138 ANKRD23Q86SG2 305 aa13.62□□□□□ -0.23
CSF3R-208ENST00000466138 ZKSCAN4Q969J2 545 aaPredicted RBP13.62□□□□□ -0.23
CSF3R-208ENST00000466138 THUMPD2Q9BTF0 503 aaKnown RBP13.62□□□□□ -0.23
CSF3R-208ENST00000466138 LTBP2Q14767 1821 aa13.62□□□□□ -0.23
CSF3R-208ENST00000466138 RTP1P59025 263 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms