RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 PDE8BO95263 885 aa21.34■■□□□ 1.01
SYNE4-204ENST00000465425 YEATS4O95619 227 aa21.34■■□□□ 1.01
SYNE4-204ENST00000465425 FMR1NBQ8N0W7 255 aaPredicted RBP21.34■■□□□ 1.01
SYNE4-204ENST00000465425 ANGEL1Q9UNK9 670 aaKnown RBP21.34■■□□□ 1.01
SYNE4-204ENST00000465425 CLIC4Q9Y696 253 aa21.34■■□□□ 1.01
SYNE4-204ENST00000465425 MYSM1Q5VVJ2 828 aa21.33■■□□□ 1.01
SYNE4-204ENST00000465425 SPTLC2O15270 562 aa21.33■■□□□ 1
SYNE4-204ENST00000465425 PDE8AO60658 829 aa21.33■■□□□ 1
SYNE4-204ENST00000465425 CYP19A1P11511 503 aaPredicted RBP21.33■■□□□ 1
SYNE4-204ENST00000465425 UBE3CQ15386 1083 aa21.33■■□□□ 1
SYNE4-204ENST00000465425 VGLL2Q8N8G2 317 aa21.33■■□□□ 1
SYNE4-204ENST00000465425 MRFAP1L1Q96HT8 127 aa21.33■■□□□ 1
SYNE4-204ENST00000465425 SYTL4Q96C24 671 aaPredicted RBP21.32■■□□□ 1
SYNE4-204ENST00000465425 ZBTB1Q9Y2K1 713 aa21.32■■□□□ 1
SYNE4-204ENST00000465425 NDUFA8P51970 172 aa21.32■■□□□ 1
SYNE4-204ENST00000465425 CCDC102BQ68D86 513 aa21.32■■□□□ 1
SYNE4-204ENST00000465425 PIH1D3Q9NQM4 214 aaKnown RBP21.32■■□□□ 1
SYNE4-204ENST00000465425 MYH7P12883 1935 aa21.31■■□□□ 1
SYNE4-204ENST00000465425 ZNF335Q9H4Z2 1342 aaPredicted RBP21.31■■□□□ 1
SYNE4-204ENST00000465425 ZNF532Q9HCE3 1301 aa21.31■■□□□ 1
SYNE4-204ENST00000465425 CDKL5O76039 1030 aa21.31■■□□□ 1
SYNE4-204ENST00000465425 UQCRFS1P1P0C7P4 283 aa21.31■■□□□ 1
SYNE4-204ENST00000465425 METAP2P50579 478 aaKnown RBP eCLIP21.31■■□□□ 1
SYNE4-204ENST00000465425 ERCC4Q92889 916 aaPredicted RBP21.31■■□□□ 1
SYNE4-204ENST00000465425 ATRNO75882 1429 aa21.31■■□□□ 1
SYNE4-204ENST00000465425 A0A087WWV3 80 aa21.3■■□□□ 1
SYNE4-204ENST00000465425 PHKA1P46020 1223 aa21.3■■□□□ 1
SYNE4-204ENST00000465425 CPLX2Q6PUV4 134 aaKnown RBP21.3■■□□□ 1
SYNE4-204ENST00000465425 DHX40Q8IX18 779 aaKnown RBP21.3■■□□□ 1
SYNE4-204ENST00000465425 FBXW7Q969H0 707 aa21.3■■□□□ 1
SYNE4-204ENST00000465425 AIDAQ96BJ3 306 aa21.3■■□□□ 1
SYNE4-204ENST00000465425 GJB4Q9NTQ9 266 aa21.3■■□□□ 1
SYNE4-204ENST00000465425 ZMYM6O95789 1325 aa21.3■■□□□ 1
SYNE4-204ENST00000465425 DZIP3Q86Y13 1208 aaKnown RBP21.3■■□□□ 1
SYNE4-204ENST00000465425 TBC1D10CQ8IV04 446 aa21.3■■□□□ 1
SYNE4-204ENST00000465425 NBPF3Q9H094 633 aa21.3■■□□□ 1
SYNE4-204ENST00000465425 PDE6AP16499 860 aa21.29■■□□□ 1
SYNE4-204ENST00000465425 ARID4AP29374 1257 aaPredicted RBP21.29■■□□□ 1
SYNE4-204ENST00000465425 KIF23Q02241 960 aaPredicted RBP21.29■■□□□ 1
SYNE4-204ENST00000465425 PUM3Q15397 648 aaKnown RBP21.29■■□□□ 1
SYNE4-204ENST00000465425 CCDC144BQ3MJ40 725 aa21.29■■□□□ 1
SYNE4-204ENST00000465425 CCDC144CPQ8IYA2 1237 aa21.29■■□□□ 1
SYNE4-204ENST00000465425 AOPEPQ8N6M6 819 aa21.29■■□□□ 1
SYNE4-204ENST00000465425 CACTINQ8WUQ7 758 aaKnown RBP21.29■■□□□ 1
SYNE4-204ENST00000465425 BCL9O00512 1426 aa21.29■■□□□ 1
SYNE4-204ENST00000465425 ANO1Q5XXA6 986 aa21.29■■□□□ 1
SYNE4-204ENST00000465425 LPIN2Q92539 896 aa21.29■■□□□ 1
SYNE4-204ENST00000465425 TSC1Q92574 1164 aa21.29■■□□□ 1
SYNE4-204ENST00000465425 SLC4A9Q96Q91 983 aa21.29■■□□□ 1
SYNE4-204ENST00000465425 KIF28PB7ZC32 967 aa21.28■■□□□ 1
SYNE4-204ENST00000465425 GNL2Q13823 731 aaKnown RBP21.28■■□□□ 1
SYNE4-204ENST00000465425 CYB5R4Q7L1T6 521 aa21.28■■□□□ 1
SYNE4-204ENST00000465425 C16orf45Q96MC5 204 aaPredicted RBP21.28■■□□□ 1
SYNE4-204ENST00000465425 KIAA1468Q9P260 1216 aa21.28■■□□□ 1
SYNE4-204ENST00000465425 DENND2AQ9ULE3 1009 aa21.28■■□□□ 1
SYNE4-204ENST00000465425 ERVV-1B6SEH8 477 aa21.28■■□□□ 1
SYNE4-204ENST00000465425 SH2B2O14492 632 aaPredicted RBP21.28■■□□□ 1
SYNE4-204ENST00000465425 NEMFO60524 1076 aa21.28■■□□□ 1
SYNE4-204ENST00000465425 ALG1Q9BT22 464 aa21.28■■□□□ 1
SYNE4-204ENST00000465425 AKAP11Q9UKA4 1901 aa21.28■■□□□ 1
SYNE4-204ENST00000465425 MROH5Q6ZUA9 1318 aa21.28■■□□□ 1
SYNE4-204ENST00000465425 LRP6O75581 1613 aa21.27■■□□□ 1
SYNE4-204ENST00000465425 B4E1Z4 1266 aa21.27■■□□□ 1
SYNE4-204ENST00000465425 RIOK3O14730 519 aaKnown RBP21.27■■□□□ 1
SYNE4-204ENST00000465425 NFXL1Q6ZNB6 911 aa21.27■■□□□ 1
SYNE4-204ENST00000465425 MICU3Q86XE3 530 aa21.27■■□□□ 1
SYNE4-204ENST00000465425 LRRC8AQ8IWT6 810 aa21.27■■□□□ 1
SYNE4-204ENST00000465425 RGS22Q8NE09 1264 aa21.27■■□□□ 1
SYNE4-204ENST00000465425 TMEM87BQ96K49 555 aa21.27■■□□□ 1
SYNE4-204ENST00000465425 WWC3Q9ULE0 1092 aa21.27■■□□□ 1
SYNE4-204ENST00000465425 IL6STP40189 918 aaPredicted RBP21.27■□□□□ 0.99
SYNE4-204ENST00000465425 APOA5Q6Q788 366 aa21.27■□□□□ 0.99
SYNE4-204ENST00000465425 HELBQ8NG08 1087 aaPredicted RBP21.27■□□□□ 0.99
SYNE4-204ENST00000465425 TAOK2Q9UL54 1235 aa21.27■□□□□ 0.99
SYNE4-204ENST00000465425 ITGB4P16144 1822 aa21.26■□□□□ 0.99
SYNE4-204ENST00000465425 MYH3P11055 1940 aa21.26■□□□□ 0.99
SYNE4-204ENST00000465425 RXRAP19793 462 aa21.26■□□□□ 0.99
SYNE4-204ENST00000465425 ZNF202O95125 648 aa21.26■□□□□ 0.99
SYNE4-204ENST00000465425 SLC3A2P08195 630 aaKnown RBP21.26■□□□□ 0.99
SYNE4-204ENST00000465425 SLC5A1P13866 664 aa21.26■□□□□ 0.99
SYNE4-204ENST00000465425 UBN2Q6ZU65 1347 aa21.26■□□□□ 0.99
SYNE4-204ENST00000465425 KAT6BQ8WYB5 2073 aa21.25■□□□□ 0.99
SYNE4-204ENST00000465425 EXOC5O00471 708 aa21.25■□□□□ 0.99
SYNE4-204ENST00000465425 ZBTB43O43298 467 aa21.25■□□□□ 0.99
SYNE4-204ENST00000465425 MAP3K12Q12852 859 aa21.25■□□□□ 0.99
SYNE4-204ENST00000465425 TPD52L1Q16890 204 aaPredicted RBP21.25■□□□□ 0.99
SYNE4-204ENST00000465425 FILIP1Q7Z7B0 1213 aa21.25■□□□□ 0.99
SYNE4-204ENST00000465425 VPS37DQ86XT2 251 aa21.25■□□□□ 0.99
SYNE4-204ENST00000465425 SPATA5Q8NB90 893 aa21.25■□□□□ 0.99
SYNE4-204ENST00000465425 STRBPQ96SI9 672 aaKnown RBP21.25■□□□□ 0.99
SYNE4-204ENST00000465425 ARID3AQ99856 593 aa21.25■□□□□ 0.99
SYNE4-204ENST00000465425 TCRBV5S4A2TA0A5A2 114 aa21.24■□□□□ 0.99
SYNE4-204ENST00000465425 CMA1P23946 247 aa21.24■□□□□ 0.99
SYNE4-204ENST00000465425 TRIM29Q14134 588 aa21.24■□□□□ 0.99
SYNE4-204ENST00000465425 AIFM3Q96NN9 605 aa21.24■□□□□ 0.99
SYNE4-204ENST00000465425 NAPBQ9H115 298 aa21.24■□□□□ 0.99
SYNE4-204ENST00000465425 DDX60Q8IY21 1712 aaKnown RBP21.24■□□□□ 0.99
SYNE4-204ENST00000465425 ANKRD36CQ5JPF3 1778 aa21.24■□□□□ 0.99
SYNE4-204ENST00000465425 TNNT1P13805 278 aa21.24■□□□□ 0.99
SYNE4-204ENST00000465425 PHKBQ93100 1093 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms