RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 PSMD14O00487 310 aa10.9□□□□□ -0.66
NUDCD3-204ENST00000464812 SEMA3EO15041 775 aa10.9□□□□□ -0.66
NUDCD3-204ENST00000464812 TOMM70O94826 608 aa10.9□□□□□ -0.66
NUDCD3-204ENST00000464812 HTRA3P83110 453 aa10.9□□□□□ -0.66
NUDCD3-204ENST00000464812 FMR1Q06787 632 aaKnown RBP eCLIP10.9□□□□□ -0.66
NUDCD3-204ENST00000464812 NIM1KQ8IY84 436 aa10.9□□□□□ -0.66
NUDCD3-204ENST00000464812 GPC2Q8N158 579 aa10.9□□□□□ -0.66
NUDCD3-204ENST00000464812 CERS5Q8N5B7 392 aa10.9□□□□□ -0.66
NUDCD3-204ENST00000464812 GMLQ99445 158 aa10.9□□□□□ -0.66
NUDCD3-204ENST00000464812 VPS33BQ9H267 617 aa10.9□□□□□ -0.66
NUDCD3-204ENST00000464812 IL25Q9H293 177 aa10.9□□□□□ -0.66
NUDCD3-204ENST00000464812 DENND2AQ9ULE3 1009 aa10.9□□□□□ -0.66
NUDCD3-204ENST00000464812 FAM205AQ6ZU69 1335 aa10.89□□□□□ -0.67
NUDCD3-204ENST00000464812 LAMA4Q16363 1823 aa10.89□□□□□ -0.67
NUDCD3-204ENST00000464812 VEGFAP15692 232 aaPredicted RBP10.89□□□□□ -0.67
NUDCD3-204ENST00000464812 GMPSP49915 693 aaPredicted RBP10.89□□□□□ -0.67
NUDCD3-204ENST00000464812 DLK2Q6UY11 383 aa10.89□□□□□ -0.67
NUDCD3-204ENST00000464812 CNTROBQ8N137 903 aa10.89□□□□□ -0.67
NUDCD3-204ENST00000464812 KBTBD3Q8NAB2 608 aa10.89□□□□□ -0.67
NUDCD3-204ENST00000464812 TRPM4Q8TD43 1214 aa10.89□□□□□ -0.67
NUDCD3-204ENST00000464812 EVI5LQ96CN4 794 aa10.89□□□□□ -0.67
NUDCD3-204ENST00000464812 FSD1Q9BTV5 496 aa10.89□□□□□ -0.67
NUDCD3-204ENST00000464812 GNL3LQ9NVN8 582 aaKnown RBP10.89□□□□□ -0.67
NUDCD3-204ENST00000464812 GJA3Q9Y6H8 435 aa10.89□□□□□ -0.67
NUDCD3-204ENST00000464812 NAV1Q8NEY1 1877 aa10.89□□□□□ -0.67
NUDCD3-204ENST00000464812 SALL1Q9NSC2 1324 aa10.88□□□□□ -0.67
NUDCD3-204ENST00000464812 LAMB1P07942 1786 aa10.88□□□□□ -0.67
NUDCD3-204ENST00000464812 BAZ2AQ9UIF9 1905 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-204ENST00000464812 ITGBL1O95965 494 aaPredicted RBP10.88□□□□□ -0.67
NUDCD3-204ENST00000464812 PRDX5P30044 214 aa10.88□□□□□ -0.67
NUDCD3-204ENST00000464812 GTF2IP78347 998 aa10.88□□□□□ -0.67
NUDCD3-204ENST00000464812 DACT2Q5SW24 774 aa10.88□□□□□ -0.67
NUDCD3-204ENST00000464812 CHRDL2Q6WN34 429 aa10.88□□□□□ -0.67
NUDCD3-204ENST00000464812 RBM46Q8TBY0 533 aaKnown RBP10.88□□□□□ -0.67
NUDCD3-204ENST00000464812 JDP2Q8WYK2 163 aa10.88□□□□□ -0.67
NUDCD3-204ENST00000464812 GPRC5DQ9NZD1 345 aa10.88□□□□□ -0.67
NUDCD3-204ENST00000464812 ASTN2O75129 1339 aaPredicted RBP10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 POLR2AP24928 1970 aaKnown RBP10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 A0A0D9SFI3 127 aa10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 TCRBV5S4A2TA0A5A2 114 aa10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 CDC45O75419 566 aa10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 FRAT2O75474 233 aaPredicted RBP10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 IDH1O75874 414 aaKnown RBP10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 VIL1P09327 827 aaKnown RBP10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 CHMLP26374 656 aa10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 EPHX2P34913 555 aa10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 NMIQ13287 307 aaPredicted RBP10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 CIAPIN1Q6FI81 312 aa10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 DPY19L2Q6NUT2 758 aa10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 PODNQ7Z5L7 613 aa10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 ADGRA1Q86SQ6 560 aa10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 FBXW7Q969H0 707 aa10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 FAM227BQ96M60 508 aa10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 ABCF2Q9UG63 623 aa10.87□□□□□ -0.67
NUDCD3-204ENST00000464812 PASKQ96RG2 1323 aa10.86□□□□□ -0.67
NUDCD3-204ENST00000464812 SEC24BO95487 1268 aa10.86□□□□□ -0.67
NUDCD3-204ENST00000464812 PDE6AP16499 860 aa10.86□□□□□ -0.67
NUDCD3-204ENST00000464812 ADD2P35612 726 aa10.86□□□□□ -0.67
NUDCD3-204ENST00000464812 EIF6P56537 245 aaKnown RBP10.86□□□□□ -0.67
NUDCD3-204ENST00000464812 MFSD14BQ5SR56 506 aa10.86□□□□□ -0.67
NUDCD3-204ENST00000464812 SEC62Q99442 399 aaKnown RBP10.86□□□□□ -0.67
NUDCD3-204ENST00000464812 HACL1Q9UJ83 578 aa10.86□□□□□ -0.67
NUDCD3-204ENST00000464812 PCDHAC2Q9Y5I4 1007 aa10.86□□□□□ -0.67
NUDCD3-204ENST00000464812 MAST3O60307 1309 aa10.85□□□□□ -0.67
NUDCD3-204ENST00000464812 G3V3G9 751 aa10.85□□□□□ -0.67
NUDCD3-204ENST00000464812 M0R2C6 588 aa10.85□□□□□ -0.67
NUDCD3-204ENST00000464812 HSPA6P17066 643 aa10.85□□□□□ -0.67
NUDCD3-204ENST00000464812 MECOMQ03112 1051 aa10.85□□□□□ -0.67
NUDCD3-204ENST00000464812 TTF1Q15361 905 aaPredicted RBP10.85□□□□□ -0.67
NUDCD3-204ENST00000464812 DCAF8Q5TAQ9 597 aa10.85□□□□□ -0.67
NUDCD3-204ENST00000464812 STRIP1Q5VSL9 837 aa10.85□□□□□ -0.67
NUDCD3-204ENST00000464812 TTLL5Q6EMB2 1281 aa10.85□□□□□ -0.67
NUDCD3-204ENST00000464812 CCDC129Q6ZRS4 1044 aa10.85□□□□□ -0.67
NUDCD3-204ENST00000464812 SAMD7Q7Z3H4 446 aa10.85□□□□□ -0.67
NUDCD3-204ENST00000464812 ZNF589Q86UQ0 364 aaPredicted RBP10.85□□□□□ -0.67
NUDCD3-204ENST00000464812 WDR66Q8TBY9 1149 aa10.85□□□□□ -0.67
NUDCD3-204ENST00000464812 NSUN4Q96CB9 384 aaKnown RBP10.85□□□□□ -0.67
NUDCD3-204ENST00000464812 ZNF532Q9HCE3 1301 aa10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 SIPA1L1O43166 1804 aa10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 MYH1P12882 1939 aa10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 USP17L3A6NCW0 530 aa10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 USP17L4A6NCW7 530 aa10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 RNF113AO15541 343 aaKnown RBP10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 DIXDC1Q155Q3 683 aa10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 ZMYM1Q5SVZ6 1142 aa10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 SLC9C2Q5TAH2 1124 aa10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 MAP1SQ66K74 1059 aaPredicted RBP10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 CWC27Q6UX04 472 aaKnown RBP10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 USP17L1Q7RTZ2 530 aa10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 MICALL2Q8IY33 904 aa10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 DNAJC5GQ8N7S2 189 aa10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 MAGEB6Q8N7X4 407 aa10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 OSBP2Q969R2 916 aa10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 RAI14Q9P0K7 980 aa10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 LRP2BPQ9P2M1 347 aa10.84□□□□□ -0.67
NUDCD3-204ENST00000464812 F8W031 263 aaPredicted RBP10.83□□□□□ -0.68
NUDCD3-204ENST00000464812 SGSM2O43147 1006 aa10.83□□□□□ -0.68
NUDCD3-204ENST00000464812 LDHBP07195 334 aaKnown RBP10.83□□□□□ -0.68
NUDCD3-204ENST00000464812 ZNF280AP59817 542 aaPredicted RBP10.83□□□□□ -0.68
NUDCD3-204ENST00000464812 FKBP1AP62942 108 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 260.2 ms