RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 CPNE3O75131 537 aaKnown RBP6.11□□□□□ -1.43
GARNL3-213ENST00000464616 GADD45BO75293 160 aaPredicted RBP6.11□□□□□ -1.43
GARNL3-213ENST00000464616 MED26O95402 600 aa6.11□□□□□ -1.43
GARNL3-213ENST00000464616 DRD2P14416 443 aa6.11□□□□□ -1.43
GARNL3-213ENST00000464616 SERPINB4P48594 390 aa6.11□□□□□ -1.43
GARNL3-213ENST00000464616 SOX4Q06945 474 aaPredicted RBP6.11□□□□□ -1.43
GARNL3-213ENST00000464616 PDE3AQ14432 1141 aa6.11□□□□□ -1.43
GARNL3-213ENST00000464616 PHLDB3Q6NSJ2 640 aa6.11□□□□□ -1.43
GARNL3-213ENST00000464616 DYMQ7RTS9 669 aa6.11□□□□□ -1.43
GARNL3-213ENST00000464616 GALNT12Q8IXK2 581 aa6.11□□□□□ -1.43
GARNL3-213ENST00000464616 TBC1D32Q96NH3 1257 aa6.11□□□□□ -1.43
GARNL3-213ENST00000464616 C1orf115Q9H7X2 142 aa6.11□□□□□ -1.43
GARNL3-213ENST00000464616 RAB6AP20340 208 aa6.1□□□□□ -1.43
GARNL3-213ENST00000464616 MAOBP27338 520 aa6.1□□□□□ -1.43
GARNL3-213ENST00000464616 TXKP42681 527 aa6.1□□□□□ -1.43
GARNL3-213ENST00000464616 MAP7Q14244 749 aa6.1□□□□□ -1.43
GARNL3-213ENST00000464616 CPSF6Q16630 551 aaKnown RBP eCLIP6.1□□□□□ -1.43
GARNL3-213ENST00000464616 AKAP4Q5JQC9 854 aa6.1□□□□□ -1.43
GARNL3-213ENST00000464616 DUSP27Q5VZP5 1158 aa6.1□□□□□ -1.43
GARNL3-213ENST00000464616 CCNJLQ8IV13 435 aa6.1□□□□□ -1.43
GARNL3-213ENST00000464616 PPP4R2Q9NY27 417 aa6.1□□□□□ -1.43
GARNL3-213ENST00000464616 AP4E1Q9UPM8 1137 aa6.1□□□□□ -1.43
GARNL3-213ENST00000464616 PRR19A6NJB7 356 aa6.09□□□□□ -1.43
GARNL3-213ENST00000464616 CYP26A1O43174 497 aa6.09□□□□□ -1.43
GARNL3-213ENST00000464616 TIAF1O95411 115 aa6.09□□□□□ -1.43
GARNL3-213ENST00000464616 SPRED3Q2MJR0 410 aa6.09□□□□□ -1.43
GARNL3-213ENST00000464616 DTX1Q86Y01 620 aa6.09□□□□□ -1.43
GARNL3-213ENST00000464616 CCER1Q8TC90 406 aaPredicted RBP6.09□□□□□ -1.43
GARNL3-213ENST00000464616 OAS3Q9Y6K5 1087 aaKnown RBP6.09□□□□□ -1.43
GARNL3-213ENST00000464616 COL17A1Q9UMD9 1497 aaPredicted RBP6.09□□□□□ -1.44
GARNL3-213ENST00000464616 TAL1P17542 331 aaPredicted RBP6.08□□□□□ -1.44
GARNL3-213ENST00000464616 GRIA4P48058 902 aa6.08□□□□□ -1.44
GARNL3-213ENST00000464616 CYP27A1Q02318 531 aa6.08□□□□□ -1.44
GARNL3-213ENST00000464616 CDPF1Q6NVV7 123 aa6.08□□□□□ -1.44
GARNL3-213ENST00000464616 CITED4Q96RK1 184 aa6.08□□□□□ -1.44
GARNL3-213ENST00000464616 DLGAP3O95886 979 aa6.07□□□□□ -1.44
GARNL3-213ENST00000464616 F13BP05160 661 aa6.07□□□□□ -1.44
GARNL3-213ENST00000464616 ADH5P11766 374 aa6.07□□□□□ -1.44
GARNL3-213ENST00000464616 SPINK2P20155 84 aa6.07□□□□□ -1.44
GARNL3-213ENST00000464616 ASPAP45381 313 aa6.07□□□□□ -1.44
GARNL3-213ENST00000464616 ZNF423Q2M1K9 1284 aa6.07□□□□□ -1.44
GARNL3-213ENST00000464616 KIAA0319Q5VV43 1072 aa6.07□□□□□ -1.44
GARNL3-213ENST00000464616 USPL1Q5W0Q7 1092 aa6.07□□□□□ -1.44
GARNL3-213ENST00000464616 TP53INP2Q8IXH6 220 aa6.07□□□□□ -1.44
GARNL3-213ENST00000464616 C2CD4AQ8NCU7 369 aaPredicted RBP6.07□□□□□ -1.44
GARNL3-213ENST00000464616 NPHS2Q9NP85 383 aa6.07□□□□□ -1.44
GARNL3-213ENST00000464616 TRAK1Q9UPV9 953 aa6.07□□□□□ -1.44
GARNL3-213ENST00000464616 NFICP08651 508 aa6.06□□□□□ -1.44
GARNL3-213ENST00000464616 FOSL1P15407 271 aa6.06□□□□□ -1.44
GARNL3-213ENST00000464616 AP3B2Q13367 1082 aa6.06□□□□□ -1.44
GARNL3-213ENST00000464616 ORC1Q13415 861 aa6.06□□□□□ -1.44
GARNL3-213ENST00000464616 TCF12Q99081 682 aa6.06□□□□□ -1.44
GARNL3-213ENST00000464616 NIF3L1Q9GZT8 377 aa6.06□□□□□ -1.44
GARNL3-213ENST00000464616 PIDD1Q9HB75 910 aa6.06□□□□□ -1.44
GARNL3-213ENST00000464616 LRRC4CQ9HCJ2 640 aa6.06□□□□□ -1.44
GARNL3-213ENST00000464616 NLRP2Q9NX02 1062 aa6.06□□□□□ -1.44
GARNL3-213ENST00000464616 BIN2Q9UBW5 565 aaPredicted RBP6.06□□□□□ -1.44
GARNL3-213ENST00000464616 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.05□□□□□ -1.44
GARNL3-213ENST00000464616 EIF1AYO14602 144 aaKnown RBP6.05□□□□□ -1.44
GARNL3-213ENST00000464616 B3GALT4O96024 378 aa6.05□□□□□ -1.44
GARNL3-213ENST00000464616 SLFN14P0C7P3 912 aa6.05□□□□□ -1.44
GARNL3-213ENST00000464616 HOXA10P31260 410 aaPredicted RBP6.05□□□□□ -1.44
GARNL3-213ENST00000464616 ZAR1Q86SH2 424 aa6.05□□□□□ -1.44
GARNL3-213ENST00000464616 FBXL18Q96ME1 805 aa6.05□□□□□ -1.44
GARNL3-213ENST00000464616 DNAJC25Q9H1X3 360 aa6.05□□□□□ -1.44
GARNL3-213ENST00000464616 DAGLAQ9Y4D2 1042 aa6.05□□□□□ -1.44
GARNL3-213ENST00000464616 RNF114Q9Y508 228 aa6.05□□□□□ -1.44
GARNL3-213ENST00000464616 ACTL7BQ9Y614 415 aa6.05□□□□□ -1.44
GARNL3-213ENST00000464616 ZNF157P51786 506 aaPredicted RBP6.04□□□□□ -1.44
GARNL3-213ENST00000464616 DTHD1Q6ZMT9 781 aa6.04□□□□□ -1.44
GARNL3-213ENST00000464616 CCDC74AQ96AQ1 378 aa6.04□□□□□ -1.44
GARNL3-213ENST00000464616 DMRTB1Q96MA1 342 aa6.04□□□□□ -1.44
GARNL3-213ENST00000464616 ZNF576Q9H609 170 aa6.04□□□□□ -1.44
GARNL3-213ENST00000464616 LGR6Q9HBX8 967 aa6.04□□□□□ -1.44
GARNL3-213ENST00000464616 PRKAG2Q9UGJ0 569 aa6.04□□□□□ -1.44
GARNL3-213ENST00000464616 GPN3Q9UHW5 284 aaPredicted RBP6.04□□□□□ -1.44
GARNL3-213ENST00000464616 AOC2O75106 756 aa6.03□□□□□ -1.44
GARNL3-213ENST00000464616 ARHGAP4P98171 946 aa6.03□□□□□ -1.44
GARNL3-213ENST00000464616 PTPN12Q05209 780 aaKnown RBP6.03□□□□□ -1.44
GARNL3-213ENST00000464616 PPP2R3AQ06190 1150 aa6.03□□□□□ -1.44
GARNL3-213ENST00000464616 VSIG10LQ86VR7 867 aa6.03□□□□□ -1.44
GARNL3-213ENST00000464616 EZH1Q92800 747 aaPredicted RBP6.03□□□□□ -1.44
GARNL3-213ENST00000464616 ZC3H12CQ9C0D7 883 aaKnown RBP6.03□□□□□ -1.44
GARNL3-213ENST00000464616 BSDC1Q9NW68 430 aaPredicted RBP6.03□□□□□ -1.44
GARNL3-213ENST00000464616 TIMELESSQ9UNS1 1208 aa6.03□□□□□ -1.44
GARNL3-213ENST00000464616 TMEM238LA0A1B0GVL6 79 aa6.02□□□□□ -1.45
GARNL3-213ENST00000464616 FAM170BA6NMN3 283 aa6.02□□□□□ -1.45
GARNL3-213ENST00000464616 SUPT5HO00267 1087 aaKnown RBP6.02□□□□□ -1.45
GARNL3-213ENST00000464616 ITPKAP23677 461 aa6.02□□□□□ -1.45
GARNL3-213ENST00000464616 CYP27C1Q4G0S4 372 aa6.02□□□□□ -1.45
GARNL3-213ENST00000464616 ARHGAP27Q6ZUM4 889 aa6.02□□□□□ -1.45
GARNL3-213ENST00000464616 FLCNQ8NFG4 579 aa6.02□□□□□ -1.45
GARNL3-213ENST00000464616 CSRNP1Q96S65 589 aa6.02□□□□□ -1.45
GARNL3-213ENST00000464616 FAM129BQ96TA1 746 aa6.02□□□□□ -1.45
GARNL3-213ENST00000464616 KRTAP9-2Q9BYQ4 174 aa6.02□□□□□ -1.45
GARNL3-213ENST00000464616 SEMA6CQ9H3T2 930 aa6.02□□□□□ -1.45
GARNL3-213ENST00000464616 SSU72Q9NP77 194 aaKnown RBP6.02□□□□□ -1.45
GARNL3-213ENST00000464616 FAM105AQ9NUU6 356 aa6.02□□□□□ -1.45
GARNL3-213ENST00000464616 RNGTTO60942 597 aaKnown RBP6.01□□□□□ -1.45
GARNL3-213ENST00000464616 ADAMTS4O75173 837 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms