RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 ADGRA1Q86SQ6 560 aa22.66■■□□□ 1.22
CCDC78-206ENST00000463539 MIGA1Q8NAN2 632 aa22.66■■□□□ 1.22
CCDC78-206ENST00000463539 FGAP02671 866 aa22.66■■□□□ 1.22
CCDC78-206ENST00000463539 APPP05067 770 aa22.66■■□□□ 1.22
CCDC78-206ENST00000463539 CC2D2BQ6DHV5 1058 aa22.66■■□□□ 1.22
CCDC78-206ENST00000463539 SPRYD3Q8NCJ5 442 aa22.66■■□□□ 1.22
CCDC78-206ENST00000463539 C7orf43Q8WVR3 580 aa22.66■■□□□ 1.22
CCDC78-206ENST00000463539 MYH13Q9UKX3 1938 aa22.66■■□□□ 1.22
CCDC78-206ENST00000463539 HSP90AA1P07900 732 aaKnown RBP22.65■■□□□ 1.22
CCDC78-206ENST00000463539 DPEP1P16444 411 aa22.65■■□□□ 1.22
CCDC78-206ENST00000463539 GNAT2P19087 354 aa22.65■■□□□ 1.22
CCDC78-206ENST00000463539 IMMTQ16891 758 aaKnown RBP22.65■■□□□ 1.22
CCDC78-206ENST00000463539 TTLL5Q6EMB2 1281 aa22.65■■□□□ 1.22
CCDC78-206ENST00000463539 RUFY3Q7L099 469 aa22.65■■□□□ 1.22
CCDC78-206ENST00000463539 DZIP1Q86YF9 867 aaKnown RBP22.65■■□□□ 1.22
CCDC78-206ENST00000463539 LCORLQ8N3X6 602 aa22.65■■□□□ 1.22
CCDC78-206ENST00000463539 TTLL6Q8N841 843 aa22.65■■□□□ 1.22
CCDC78-206ENST00000463539 ZNF384Q8TF68 577 aa22.65■■□□□ 1.22
CCDC78-206ENST00000463539 A0A0G2JLW4 131 aa22.64■■□□□ 1.22
CCDC78-206ENST00000463539 MAGEB6P1A0A0J9YX57 407 aa22.64■■□□□ 1.22
CCDC78-206ENST00000463539 LDHBP07195 334 aaKnown RBP22.64■■□□□ 1.22
CCDC78-206ENST00000463539 CPA1P15085 419 aa22.64■■□□□ 1.22
CCDC78-206ENST00000463539 TTC14Q96N46 770 aa22.64■■□□□ 1.22
CCDC78-206ENST00000463539 SLX4Q8IY92 1834 aa22.64■■□□□ 1.21
CCDC78-206ENST00000463539 BLOC1S2Q6QNY1 142 aa22.64■■□□□ 1.21
CCDC78-206ENST00000463539 SLKQ9H2G2 1235 aaPredicted RBP22.64■■□□□ 1.21
CCDC78-206ENST00000463539 CACNA1SQ13698 1873 aa22.63■■□□□ 1.21
CCDC78-206ENST00000463539 PATL2C9JE40 543 aaKnown RBP22.63■■□□□ 1.21
CCDC78-206ENST00000463539 TBC1D22AQ8WUA7 517 aa22.63■■□□□ 1.21
CCDC78-206ENST00000463539 PDRG1Q9NUG6 133 aa22.63■■□□□ 1.21
CCDC78-206ENST00000463539 PSDA5PKW4 1024 aaPredicted RBP22.62■■□□□ 1.21
CCDC78-206ENST00000463539 NEK1Q96PY6 1258 aa22.62■■□□□ 1.21
CCDC78-206ENST00000463539 RTFDC1Q9BY42 306 aaPredicted RBP22.62■■□□□ 1.21
CCDC78-206ENST00000463539 SLC4A4Q9Y6R1 1079 aa22.62■■□□□ 1.21
CCDC78-206ENST00000463539 ZMYM6O95789 1325 aa22.62■■□□□ 1.21
CCDC78-206ENST00000463539 FAM205AQ6ZU69 1335 aa22.62■■□□□ 1.21
CCDC78-206ENST00000463539 G3V3G9 751 aa22.61■■□□□ 1.21
CCDC78-206ENST00000463539 C21orf2O43822 256 aa22.61■■□□□ 1.21
CCDC78-206ENST00000463539 KCNA3P22001 575 aa22.61■■□□□ 1.21
CCDC78-206ENST00000463539 TGFB2P61812 414 aa22.61■■□□□ 1.21
CCDC78-206ENST00000463539 DCAF8Q5TAQ9 597 aa22.61■■□□□ 1.21
CCDC78-206ENST00000463539 NOL8Q76FK4 1167 aaKnown RBP22.61■■□□□ 1.21
CCDC78-206ENST00000463539 RIOK1Q9BRS2 568 aaKnown RBP22.61■■□□□ 1.21
CCDC78-206ENST00000463539 NACAP1Q9BZK3 213 aa22.61■■□□□ 1.21
CCDC78-206ENST00000463539 MAST2Q6P0Q8 1798 aa22.61■■□□□ 1.21
CCDC78-206ENST00000463539 DLEC1Q9Y238 1755 aa22.61■■□□□ 1.21
CCDC78-206ENST00000463539 RPS6KB1P23443 525 aa22.61■■□□□ 1.21
CCDC78-206ENST00000463539 AK2P54819 239 aa22.61■■□□□ 1.21
CCDC78-206ENST00000463539 ALX1Q15699 326 aa22.61■■□□□ 1.21
CCDC78-206ENST00000463539 DOK7Q18PE1 504 aa22.61■■□□□ 1.21
CCDC78-206ENST00000463539 MFSD14BQ5SR56 506 aa22.61■■□□□ 1.21
CCDC78-206ENST00000463539 STOX1Q6ZVD7 989 aa22.61■■□□□ 1.21
CCDC78-206ENST00000463539 SNED1Q8TER0 1413 aa22.6■■□□□ 1.21
CCDC78-206ENST00000463539 E7EWF7 191 aa22.6■■□□□ 1.21
CCDC78-206ENST00000463539 ZNF213O14771 459 aa22.6■■□□□ 1.21
CCDC78-206ENST00000463539 HAND2P61296 217 aa22.6■■□□□ 1.21
CCDC78-206ENST00000463539 GSTO1P78417 241 aa22.6■■□□□ 1.21
CCDC78-206ENST00000463539 GRIPAP1Q4V328 841 aa22.6■■□□□ 1.21
CCDC78-206ENST00000463539 IFNL3Q8IZI9 196 aa22.6■■□□□ 1.21
CCDC78-206ENST00000463539 NAPBQ9H115 298 aa22.6■■□□□ 1.21
CCDC78-206ENST00000463539 EPB41L4AQ9HCS5 686 aaPredicted RBP22.6■■□□□ 1.21
CCDC78-206ENST00000463539 GSG1L2A8MUP6 293 aa22.59■■□□□ 1.21
CCDC78-206ENST00000463539 PRKAB2O43741 272 aa22.59■■□□□ 1.21
CCDC78-206ENST00000463539 HMGB1P09429 215 aaKnown RBP22.59■■□□□ 1.21
CCDC78-206ENST00000463539 GTF2IP78347 998 aa22.59■■□□□ 1.21
CCDC78-206ENST00000463539 CCDC93Q567U6 631 aa22.59■■□□□ 1.21
CCDC78-206ENST00000463539 SUPT20HQ8NEM7 779 aa22.59■■□□□ 1.21
CCDC78-206ENST00000463539 TMX3Q96JJ7 454 aa22.59■■□□□ 1.21
CCDC78-206ENST00000463539 KIF13BQ9NQT8 1826 aa22.59■■□□□ 1.21
CCDC78-206ENST00000463539 DYNLL1P63167 89 aaKnown RBP22.59■■□□□ 1.21
CCDC78-206ENST00000463539 GRIK5Q16478 980 aa22.59■■□□□ 1.21
CCDC78-206ENST00000463539 TDO2P48775 406 aa22.58■■□□□ 1.21
CCDC78-206ENST00000463539 COL9A3Q14050 684 aaPredicted RBP22.58■■□□□ 1.21
CCDC78-206ENST00000463539 FBXW7Q969H0 707 aa22.58■■□□□ 1.21
CCDC78-206ENST00000463539 SGIP1Q9BQI5 828 aa22.58■■□□□ 1.21
CCDC78-206ENST00000463539 AATFQ9NY61 560 aaKnown RBP eCLIP22.58■■□□□ 1.21
CCDC78-206ENST00000463539 PODNQ7Z5L7 613 aa22.57■■□□□ 1.2
CCDC78-206ENST00000463539 RTKN2Q8IZC4 609 aa22.57■■□□□ 1.2
CCDC78-206ENST00000463539 FOXD4L1Q9NU39 408 aa22.57■■□□□ 1.2
CCDC78-206ENST00000463539 PIM2Q9P1W9 311 aa22.57■■□□□ 1.2
CCDC78-206ENST00000463539 PPP1R1BQ9UD71 204 aaPredicted RBP22.57■■□□□ 1.2
CCDC78-206ENST00000463539 DBNDD1Q9H9R9 158 aa22.57■■□□□ 1.2
CCDC78-206ENST00000463539 LIMCH1Q9UPQ0 1083 aa22.57■■□□□ 1.2
CCDC78-206ENST00000463539 ANKRD1Q15327 319 aa22.56■■□□□ 1.2
CCDC78-206ENST00000463539 DIXDC1Q155Q3 683 aa22.56■■□□□ 1.2
CCDC78-206ENST00000463539 SDR42E1Q8WUS8 393 aa22.56■■□□□ 1.2
CCDC78-206ENST00000463539 TCEANC2Q96MN5 208 aa22.56■■□□□ 1.2
CCDC78-206ENST00000463539 LDHCP07864 332 aa22.55■■□□□ 1.2
CCDC78-206ENST00000463539 KIAA2012Q0VF49 1180 aa22.55■■□□□ 1.2
CCDC78-206ENST00000463539 CRNKL1Q9BZJ0 848 aaKnown RBP22.55■■□□□ 1.2
CCDC78-206ENST00000463539 ALDH8A1Q9H2A2 487 aaPredicted RBP22.55■■□□□ 1.2
CCDC78-206ENST00000463539 AOC3Q16853 763 aa22.54■■□□□ 1.2
CCDC78-206ENST00000463539 SOGA3Q5TF21 947 aa22.54■■□□□ 1.2
CCDC78-206ENST00000463539 DHX32Q7L7V1 743 aaKnown RBP22.54■■□□□ 1.2
CCDC78-206ENST00000463539 KLHL34Q8N239 644 aa22.54■■□□□ 1.2
CCDC78-206ENST00000463539 NOL10Q9BSC4 688 aaKnown RBP22.54■■□□□ 1.2
CCDC78-206ENST00000463539 SUGT1Q9Y2Z0 365 aa22.54■■□□□ 1.2
CCDC78-206ENST00000463539 CD2APQ9Y5K6 639 aa22.54■■□□□ 1.2
CCDC78-206ENST00000463539 MROH7-TTC4A0A0A0MT08 1334 aa22.54■■□□□ 1.2
CCDC78-206ENST00000463539 ECE2O60344 883 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms