RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 RCOR1Q9UKL0 485 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 NSFL1CQ9UNZ2 370 aaKnown RBP5.5□□□□□ -1.53
VPS72-203ENST00000463470 TBC1D2BQ9UPU7 963 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 CHMP3Q9Y3E7 222 aa5.5□□□□□ -1.53
VPS72-203ENST00000463470 ZMYM6O95789 1325 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 C4BP0C0L5 1744 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 A0A1B0GUL7 405 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 A0A1W2PQ27 194 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 A0A1W2PQ64 194 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 A0A1W2PQD8 194 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 ANKRD18BA2A2Z9 1011 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 NBPF26B4DH59 902 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 ATP5J2-PTCD1G3V325 749 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 GOLGA6L19H0YKK7 550 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 GOLIM4O00461 696 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 CPLX1O14810 134 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 KINO60870 393 aaKnown RBP5.49□□□□□ -1.53
VPS72-203ENST00000463470 PTCD1O75127 700 aaKnown RBP5.49□□□□□ -1.53
VPS72-203ENST00000463470 HSPD1P10809 573 aaKnown RBP5.49□□□□□ -1.53
VPS72-203ENST00000463470 HCLS1P14317 486 aaPredicted RBP5.49□□□□□ -1.53
VPS72-203ENST00000463470 CDC25BP30305 580 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 RCAN1P53805 252 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 PPP2R5BQ15173 497 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 UBE3CQ15386 1083 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 E2F4Q16254 413 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 RC3H1Q5TC82 1133 aaKnown RBP5.49□□□□□ -1.53
VPS72-203ENST00000463470 NBPF10Q6P3W6 841 aaKnown RBP5.49□□□□□ -1.53
VPS72-203ENST00000463470 GIGYF2Q6Y7W6 1299 aaKnown RBP5.49□□□□□ -1.53
VPS72-203ENST00000463470 SMIM5Q71RC9 77 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 TTC6Q86TZ1 520 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 ZNF589Q86UQ0 364 aaPredicted RBP5.49□□□□□ -1.53
VPS72-203ENST00000463470 NBPF15Q8N660 670 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 NECAB1Q8N987 351 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 KCNG4Q8TDN1 519 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 LEO1Q8WVC0 666 aaPredicted RBP5.49□□□□□ -1.53
VPS72-203ENST00000463470 WASF1Q92558 559 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 BRF1Q92994 677 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 CCDC34Q96HJ3 373 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 ANO10Q9NW15 660 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 TLR7Q9NYK1 1049 aaKnown RBP5.49□□□□□ -1.53
VPS72-203ENST00000463470 C5P01031 1676 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 ZNF831Q5JPB2 1677 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 UBR2Q8IWV8 1755 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 ARFGEF2Q9Y6D5 1785 aa5.49□□□□□ -1.53
VPS72-203ENST00000463470 MAP3K15Q6ZN16 1313 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 MROH5Q6ZUA9 1318 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 ZNF609O15014 1411 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 AFDNP55196 1824 aaKnown RBP5.48□□□□□ -1.53
VPS72-203ENST00000463470 E7EWF7 191 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 KIF2AO00139 706 aaPredicted RBP5.48□□□□□ -1.53
VPS72-203ENST00000463470 ZNF213O14771 459 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 GRIN3BO60391 1043 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 LARGE1O95461 756 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 YEATS4O95619 227 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 GNAT2P19087 354 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 IL6STP40189 918 aaPredicted RBP5.48□□□□□ -1.53
VPS72-203ENST00000463470 FAM160A1Q05DH4 1040 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 TYRO3Q06418 890 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 RESTQ13127 1097 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 NOLC1Q14978 699 aaKnown RBP eCLIP5.48□□□□□ -1.53
VPS72-203ENST00000463470 ALX1Q15699 326 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 GPR162Q16538 588 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 STX1AQ16623 288 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 PARP10Q53GL7 1025 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 DNTTIP2Q5QJE6 756 aaKnown RBP5.48□□□□□ -1.53
VPS72-203ENST00000463470 MSL1Q68DK7 614 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 SMYD5Q6GMV2 418 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 SARM1Q6SZW1 724 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 SYNE3Q6ZMZ3 975 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 DDX46Q7L014 1031 aaKnown RBP5.48□□□□□ -1.53
VPS72-203ENST00000463470 CDC37L1Q7L3B6 337 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 TMTC2Q8N394 836 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 TDRD7Q8NHU6 1098 aaKnown RBP5.48□□□□□ -1.53
VPS72-203ENST00000463470 TMEM87BQ96K49 555 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 CNNM2Q9H8M5 875 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 GDPD2Q9HCC8 539 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 SPTLC3Q9NUV7 552 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 POLR3EQ9NVU0 708 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 RTEL1Q9NZ71 1219 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 HOOK1Q9UJC3 728 aaKnown RBP5.48□□□□□ -1.53
VPS72-203ENST00000463470 TCHHQ07283 1943 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 CICQ96RK0 1608 aaPredicted RBP5.48□□□□□ -1.53
VPS72-203ENST00000463470 C10orf71Q711Q0 1435 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 CNTNAP4Q9C0A0 1308 aa5.48□□□□□ -1.53
VPS72-203ENST00000463470 CCDC196A0A1B0GTZ2 297 aa5.47□□□□□ -1.53
VPS72-203ENST00000463470 PTPDC1A2A3K4 754 aa5.47□□□□□ -1.53
VPS72-203ENST00000463470 TESPA1A2RU30 521 aaPredicted RBP5.47□□□□□ -1.53
VPS72-203ENST00000463470 BECN2A8MW95 431 aa5.47□□□□□ -1.53
VPS72-203ENST00000463470 CCP110O43303 1012 aa5.47□□□□□ -1.53
VPS72-203ENST00000463470 PDE8AO60658 829 aa5.47□□□□□ -1.53
VPS72-203ENST00000463470 PCP11498 1178 aaKnown RBP5.47□□□□□ -1.53
VPS72-203ENST00000463470 CPA1P15085 419 aa5.47□□□□□ -1.53
VPS72-203ENST00000463470 KCNA3P22001 575 aa5.47□□□□□ -1.53
VPS72-203ENST00000463470 PDIA3P30101 505 aaKnown RBP5.47□□□□□ -1.53
VPS72-203ENST00000463470 ZNF165P49910 485 aa5.47□□□□□ -1.53
VPS72-203ENST00000463470 MNX1P50219 401 aaPredicted RBP5.47□□□□□ -1.53
VPS72-203ENST00000463470 GSDMDP57764 484 aa5.47□□□□□ -1.53
VPS72-203ENST00000463470 ST3GAL1Q11201 340 aa5.47□□□□□ -1.53
VPS72-203ENST00000463470 SCRN1Q12765 414 aa5.47□□□□□ -1.53
VPS72-203ENST00000463470 SART3Q15020 963 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms