RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 DIXDC1Q155Q3 683 aa20.44■□□□□ 0.86
HLA-DPA1-245ENST00000463066 ABCF2Q9UG63 623 aa20.44■□□□□ 0.86
HLA-DPA1-245ENST00000463066 SALL1Q9NSC2 1324 aa20.44■□□□□ 0.86
HLA-DPA1-245ENST00000463066 CLRN2A0PK11 232 aa20.43■□□□□ 0.86
HLA-DPA1-245ENST00000463066 SPDYE2BA6NHP3 402 aa20.43■□□□□ 0.86
HLA-DPA1-245ENST00000463066 ZBTB22O15209 634 aa20.43■□□□□ 0.86
HLA-DPA1-245ENST00000463066 IGHDP01880 384 aa20.43■□□□□ 0.86
HLA-DPA1-245ENST00000463066 IFIT2P09913 472 aaKnown RBP20.43■□□□□ 0.86
HLA-DPA1-245ENST00000463066 SPDYE6P0CI01 402 aa20.43■□□□□ 0.86
HLA-DPA1-245ENST00000463066 HDAC1Q13547 482 aaPredicted RBP20.43■□□□□ 0.86
HLA-DPA1-245ENST00000463066 LDHBP07195 334 aaKnown RBP20.42■□□□□ 0.86
HLA-DPA1-245ENST00000463066 ZAP70P43403 619 aa20.42■□□□□ 0.86
HLA-DPA1-245ENST00000463066 KRT26Q7Z3Y9 468 aa20.42■□□□□ 0.86
HLA-DPA1-245ENST00000463066 MTMR14Q8NCE2 650 aa20.42■□□□□ 0.86
HLA-DPA1-245ENST00000463066 DCPSQ96C86 337 aaKnown RBP20.42■□□□□ 0.86
HLA-DPA1-245ENST00000463066 PDS5AQ29RF7 1337 aaKnown RBP20.42■□□□□ 0.86
HLA-DPA1-245ENST00000463066 AAMPQ13685 434 aa20.41■□□□□ 0.86
HLA-DPA1-245ENST00000463066 CDC37L1Q7L3B6 337 aa20.41■□□□□ 0.86
HLA-DPA1-245ENST00000463066 ZNF384Q8TF68 577 aa20.41■□□□□ 0.86
HLA-DPA1-245ENST00000463066 ZNF512BQ96KM6 892 aaPredicted RBP20.41■□□□□ 0.86
HLA-DPA1-245ENST00000463066 PIH1D3Q9NQM4 214 aaKnown RBP20.41■□□□□ 0.86
HLA-DPA1-245ENST00000463066 SERPINA10Q9UK55 444 aa20.41■□□□□ 0.86
HLA-DPA1-245ENST00000463066 CYP2E1P05181 493 aaPredicted RBP20.4■□□□□ 0.86
HLA-DPA1-245ENST00000463066 MMP14P50281 582 aa20.4■□□□□ 0.86
HLA-DPA1-245ENST00000463066 PRAMEF18Q5VWM3 479 aa20.4■□□□□ 0.86
HLA-DPA1-245ENST00000463066 OTUD7AQ8TE49 926 aaPredicted RBP20.4■□□□□ 0.86
HLA-DPA1-245ENST00000463066 TDRD3Q9H7E2 651 aaKnown RBP20.4■□□□□ 0.86
HLA-DPA1-245ENST00000463066 SUGT1Q9Y2Z0 365 aa20.4■□□□□ 0.86
HLA-DPA1-245ENST00000463066 MYH13Q9UKX3 1938 aa20.39■□□□□ 0.86
HLA-DPA1-245ENST00000463066 APLP1P51693 650 aa20.39■□□□□ 0.85
HLA-DPA1-245ENST00000463066 TEKT1Q969V4 418 aa20.39■□□□□ 0.85
HLA-DPA1-245ENST00000463066 ANTXR1Q9H6X2 564 aa20.39■□□□□ 0.85
HLA-DPA1-245ENST00000463066 ZNF408Q9H9D4 720 aa20.39■□□□□ 0.85
HLA-DPA1-245ENST00000463066 DAGLAQ9Y4D2 1042 aa20.39■□□□□ 0.85
HLA-DPA1-245ENST00000463066 CACNB3P54284 484 aa20.38■□□□□ 0.85
HLA-DPA1-245ENST00000463066 HDLBPQ00341 1268 aaKnown RBP20.38■□□□□ 0.85
HLA-DPA1-245ENST00000463066 CST9Q5W186 159 aa20.38■□□□□ 0.85
HLA-DPA1-245ENST00000463066 TSHZ3Q63HK5 1081 aa20.38■□□□□ 0.85
HLA-DPA1-245ENST00000463066 APOBEC3HQ6NTF7 200 aaKnown RBP20.38■□□□□ 0.85
HLA-DPA1-245ENST00000463066 SULF1Q8IWU6 871 aa20.38■□□□□ 0.85
HLA-DPA1-245ENST00000463066 VEZTQ9HBM0 779 aa20.38■□□□□ 0.85
HLA-DPA1-245ENST00000463066 ZNF70Q9UC06 446 aaPredicted RBP20.38■□□□□ 0.85
HLA-DPA1-245ENST00000463066 MAST3O60307 1309 aa20.37■□□□□ 0.85
HLA-DPA1-245ENST00000463066 MECOMQ03112 1051 aa20.37■□□□□ 0.85
HLA-DPA1-245ENST00000463066 ANKRD45Q5TZF3 282 aa20.37■□□□□ 0.85
HLA-DPA1-245ENST00000463066 ERICH6Q7L0X2 663 aa20.37■□□□□ 0.85
HLA-DPA1-245ENST00000463066 DZIP1Q86YF9 867 aaKnown RBP20.37■□□□□ 0.85
HLA-DPA1-245ENST00000463066 EDC3Q96F86 508 aaKnown RBP20.37■□□□□ 0.85
HLA-DPA1-245ENST00000463066 CDCA5Q96FF9 252 aa20.37■□□□□ 0.85
HLA-DPA1-245ENST00000463066 ZDHHC15Q96MV8 337 aa20.37■□□□□ 0.85
HLA-DPA1-245ENST00000463066 RWDD1Q9H446 243 aaPredicted RBP20.37■□□□□ 0.85
HLA-DPA1-245ENST00000463066 RAI14Q9P0K7 980 aa20.37■□□□□ 0.85
HLA-DPA1-245ENST00000463066 PITPNM2Q9BZ72 1349 aa20.36■□□□□ 0.85
HLA-DPA1-245ENST00000463066 AKAP11Q9UKA4 1901 aa20.36■□□□□ 0.85
HLA-DPA1-245ENST00000463066 CELF2O95319 508 aaKnown RBP20.36■□□□□ 0.85
HLA-DPA1-245ENST00000463066 SPDYE2Q495Y8 402 aa20.36■□□□□ 0.85
HLA-DPA1-245ENST00000463066 HHIPL2Q6UWX4 724 aa20.36■□□□□ 0.85
HLA-DPA1-245ENST00000463066 ZGPATQ8N5A5 531 aaKnown RBP20.36■□□□□ 0.85
HLA-DPA1-245ENST00000463066 BOLA2Q9H3K6 86 aa20.36■□□□□ 0.85
HLA-DPA1-245ENST00000463066 SPTY2D1Q68D10 685 aaPredicted RBP20.35■□□□□ 0.85
HLA-DPA1-245ENST00000463066 B4GALNT3Q6L9W6 998 aa20.35■□□□□ 0.85
HLA-DPA1-245ENST00000463066 NSUN4Q96CB9 384 aaKnown RBP20.35■□□□□ 0.85
HLA-DPA1-245ENST00000463066 DNAJC2Q99543 621 aaKnown RBP20.35■□□□□ 0.85
HLA-DPA1-245ENST00000463066 MRIQ9BWK5 157 aa20.35■□□□□ 0.85
HLA-DPA1-245ENST00000463066 LRP2BPQ9P2M1 347 aa20.35■□□□□ 0.85
HLA-DPA1-245ENST00000463066 POLR2AP24928 1970 aaKnown RBP20.34■□□□□ 0.85
HLA-DPA1-245ENST00000463066 TCP10L2B9ZVM9 353 aa20.34■□□□□ 0.85
HLA-DPA1-245ENST00000463066 APOBEC3FQ8IUX4 373 aaKnown RBP20.34■□□□□ 0.85
HLA-DPA1-245ENST00000463066 CDAN1Q8IWY9 1227 aa20.34■□□□□ 0.85
HLA-DPA1-245ENST00000463066 SMC5Q8IY18 1101 aa20.34■□□□□ 0.85
HLA-DPA1-245ENST00000463066 GCC1Q96CN9 775 aa20.34■□□□□ 0.85
HLA-DPA1-245ENST00000463066 GAKO14976 1311 aa20.33■□□□□ 0.85
HLA-DPA1-245ENST00000463066 TMEM88BA6NKF7 163 aa20.33■□□□□ 0.85
HLA-DPA1-245ENST00000463066 MYO1BO43795 1136 aa20.33■□□□□ 0.85
HLA-DPA1-245ENST00000463066 ATP5JP18859 108 aa20.33■□□□□ 0.85
HLA-DPA1-245ENST00000463066 CDC42EP5Q6NZY7 148 aa20.33■□□□□ 0.85
HLA-DPA1-245ENST00000463066 GOLIM4O00461 696 aa20.32■□□□□ 0.84
HLA-DPA1-245ENST00000463066 ADGRA1Q86SQ6 560 aa20.32■□□□□ 0.84
HLA-DPA1-245ENST00000463066 LNPKQ9C0E8 428 aa20.32■□□□□ 0.84
HLA-DPA1-245ENST00000463066 DEFB129Q9H1M3 183 aa20.32■□□□□ 0.84
HLA-DPA1-245ENST00000463066 ECHDC1Q9NTX5 307 aa20.32■□□□□ 0.84
HLA-DPA1-245ENST00000463066 MROH7-TTC4A0A0A0MT08 1334 aa20.31■□□□□ 0.84
HLA-DPA1-245ENST00000463066 IDH1O75874 414 aaKnown RBP20.31■□□□□ 0.84
HLA-DPA1-245ENST00000463066 BTDP43251 543 aa20.31■□□□□ 0.84
HLA-DPA1-245ENST00000463066 RASA3Q14644 834 aa20.31■□□□□ 0.84
HLA-DPA1-245ENST00000463066 MOB2Q70IA6 237 aa20.31■□□□□ 0.84
HLA-DPA1-245ENST00000463066 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.31■□□□□ 0.84
HLA-DPA1-245ENST00000463066 CREBZFQ9NS37 354 aa20.31■□□□□ 0.84
HLA-DPA1-245ENST00000463066 USP40Q9NVE5 1235 aa20.31■□□□□ 0.84
HLA-DPA1-245ENST00000463066 NFIAQ12857 509 aa20.3■□□□□ 0.84
HLA-DPA1-245ENST00000463066 FAM163AQ96GL9 167 aaPredicted RBP20.3■□□□□ 0.84
HLA-DPA1-245ENST00000463066 HAUS7Q99871 368 aa20.3■□□□□ 0.84
HLA-DPA1-245ENST00000463066 FZD1Q9UP38 647 aa20.3■□□□□ 0.84
HLA-DPA1-245ENST00000463066 CNTNAP1P78357 1384 aa20.3■□□□□ 0.84
HLA-DPA1-245ENST00000463066 SALL3Q9BXA9 1300 aa20.29■□□□□ 0.84
HLA-DPA1-245ENST00000463066 CHGBP05060 677 aa20.29■□□□□ 0.84
HLA-DPA1-245ENST00000463066 SLFNL1Q499Z3 407 aa20.29■□□□□ 0.84
HLA-DPA1-245ENST00000463066 NAA16Q6N069 864 aaPredicted RBP20.29■□□□□ 0.84
HLA-DPA1-245ENST00000463066 TMEM39BQ9GZU3 492 aa20.29■□□□□ 0.84
HLA-DPA1-245ENST00000463066 MKRN1Q9UHC7 482 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms