RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 CDC5LQ99459 802 aaKnown RBP10.01□□□□□ -0.81
SMC3-202ENST00000462899 MYD88Q99836 296 aa10.01□□□□□ -0.81
SMC3-202ENST00000462899 GREM2Q9H772 168 aa10.01□□□□□ -0.81
SMC3-202ENST00000462899 CWC25Q9NXE8 425 aaPredicted RBP10.01□□□□□ -0.81
SMC3-202ENST00000462899 PCDHAC2Q9Y5I4 1007 aa10.01□□□□□ -0.81
SMC3-202ENST00000462899 EYSQ5T1H1 3165 aa10□□□□□ -0.81
SMC3-202ENST00000462899 H0YGN5 161 aa10□□□□□ -0.81
SMC3-202ENST00000462899 USP2O75604 605 aaPredicted RBP10□□□□□ -0.81
SMC3-202ENST00000462899 TTLL5Q6EMB2 1281 aa10□□□□□ -0.81
SMC3-202ENST00000462899 RIC3Q7Z5B4 369 aa10□□□□□ -0.81
SMC3-202ENST00000462899 SHISA4Q96DD7 197 aa10□□□□□ -0.81
SMC3-202ENST00000462899 METTL22Q9BUU2 404 aaPredicted RBP10□□□□□ -0.81
SMC3-202ENST00000462899 MBIPQ9NS73 344 aa10□□□□□ -0.81
SMC3-202ENST00000462899 LEMD3Q9Y2U8 911 aa10□□□□□ -0.81
SMC3-202ENST00000462899 BOLA1Q9Y3E2 137 aa10□□□□□ -0.81
SMC3-202ENST00000462899 PTCH2Q9Y6C5 1203 aa10□□□□□ -0.81
SMC3-202ENST00000462899 IGKV5-2P06315 115 aa9.99□□□□□ -0.81
SMC3-202ENST00000462899 UBE2Q1Q7Z7E8 422 aa9.99□□□□□ -0.81
SMC3-202ENST00000462899 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.99□□□□□ -0.81
SMC3-202ENST00000462899 PPP1R12BO60237 982 aaPredicted RBP9.98□□□□□ -0.81
SMC3-202ENST00000462899 GTF2IP78347 998 aa9.98□□□□□ -0.81
SMC3-202ENST00000462899 NBPF12Q5TAG4 269 aaPredicted RBP9.98□□□□□ -0.81
SMC3-202ENST00000462899 OTUD7BQ6GQQ9 843 aa9.98□□□□□ -0.81
SMC3-202ENST00000462899 C15orf52Q6ZUT6 534 aaKnown RBP9.98□□□□□ -0.81
SMC3-202ENST00000462899 ANKRD13AQ8IZ07 590 aa9.98□□□□□ -0.81
SMC3-202ENST00000462899 BRI3BPQ8WY22 251 aa9.98□□□□□ -0.81
SMC3-202ENST00000462899 CD209Q9NNX6 404 aa9.98□□□□□ -0.81
SMC3-202ENST00000462899 RBM27Q9P2N5 1060 aaKnown RBP9.98□□□□□ -0.81
SMC3-202ENST00000462899 FKBP1AP62942 108 aaKnown RBP9.97□□□□□ -0.81
SMC3-202ENST00000462899 DLGAP5Q15398 846 aa9.97□□□□□ -0.81
SMC3-202ENST00000462899 SLC9C1Q4G0N8 1177 aa9.97□□□□□ -0.81
SMC3-202ENST00000462899 CCDC146Q8IYE0 955 aa9.97□□□□□ -0.81
SMC3-202ENST00000462899 FBXW7Q969H0 707 aa9.97□□□□□ -0.81
SMC3-202ENST00000462899 OPTNQ96CV9 577 aa9.97□□□□□ -0.81
SMC3-202ENST00000462899 PRMT6Q96LA8 375 aaPredicted RBP9.97□□□□□ -0.81
SMC3-202ENST00000462899 TEPSINQ96N21 525 aa9.97□□□□□ -0.81
SMC3-202ENST00000462899 PLA2G12BQ9BX93 195 aa9.97□□□□□ -0.81
SMC3-202ENST00000462899 LAS1LQ9Y4W2 734 aaKnown RBP9.97□□□□□ -0.81
SMC3-202ENST00000462899 PTPRFP10586 1907 aa9.96□□□□□ -0.81
SMC3-202ENST00000462899 IL1R1P14778 569 aa9.96□□□□□ -0.82
SMC3-202ENST00000462899 IREB2P48200 963 aaKnown RBP9.96□□□□□ -0.82
SMC3-202ENST00000462899 CASP7P55210 303 aa9.96□□□□□ -0.82
SMC3-202ENST00000462899 NEUROD2Q15784 382 aa9.96□□□□□ -0.82
SMC3-202ENST00000462899 SUPT20HL1Q3ZLR7 823 aa9.96□□□□□ -0.82
SMC3-202ENST00000462899 CFAP100Q494V2 611 aa9.96□□□□□ -0.82
SMC3-202ENST00000462899 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.96□□□□□ -0.82
SMC3-202ENST00000462899 NBPF11Q86T75 865 aa9.96□□□□□ -0.82
SMC3-202ENST00000462899 CDAN1Q8IWY9 1227 aa9.96□□□□□ -0.82
SMC3-202ENST00000462899 FAM43AQ8N2R8 423 aa9.96□□□□□ -0.82
SMC3-202ENST00000462899 RUNDC1Q96C34 613 aa9.96□□□□□ -0.82
SMC3-202ENST00000462899 ARHGAP39Q9C0H5 1083 aa9.96□□□□□ -0.82
SMC3-202ENST00000462899 MUC3AQ02505 3323 aa9.95□□□□□ -0.82
SMC3-202ENST00000462899 CLRN2A0PK11 232 aa9.95□□□□□ -0.82
SMC3-202ENST00000462899 H7C1W4 665 aa9.95□□□□□ -0.82
SMC3-202ENST00000462899 SNAP23O00161 211 aa9.95□□□□□ -0.82
SMC3-202ENST00000462899 DLL1O00548 723 aa9.95□□□□□ -0.82
SMC3-202ENST00000462899 CSF1RP07333 972 aa9.95□□□□□ -0.82
SMC3-202ENST00000462899 RASA3Q14644 834 aa9.95□□□□□ -0.82
SMC3-202ENST00000462899 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.95□□□□□ -0.82
SMC3-202ENST00000462899 SH3TC2Q8TF17 1288 aa9.95□□□□□ -0.82
SMC3-202ENST00000462899 ANKRD2Q9GZV1 360 aa9.95□□□□□ -0.82
SMC3-202ENST00000462899 ELP3Q9H9T3 547 aa9.95□□□□□ -0.82
SMC3-202ENST00000462899 SCUBE2Q9NQ36 999 aa9.95□□□□□ -0.82
SMC3-202ENST00000462899 MAP3K2Q9Y2U5 619 aa9.95□□□□□ -0.82
SMC3-202ENST00000462899 PRUNE2Q8WUY3 3088 aa9.95□□□□□ -0.82
SMC3-202ENST00000462899 DOCK3Q8IZD9 2030 aa9.94□□□□□ -0.82
SMC3-202ENST00000462899 ADGRA2Q96PE1 1338 aa9.94□□□□□ -0.82
SMC3-202ENST00000462899 NEURL1BA8MQ27 555 aa9.94□□□□□ -0.82
SMC3-202ENST00000462899 TLR2O60603 784 aa9.94□□□□□ -0.82
SMC3-202ENST00000462899 ITGA6P23229 1130 aa9.94□□□□□ -0.82
SMC3-202ENST00000462899 CTGFP29279 349 aa9.94□□□□□ -0.82
SMC3-202ENST00000462899 IGHMBP2P38935 993 aaKnown RBP9.94□□□□□ -0.82
SMC3-202ENST00000462899 LACTBP83111 547 aaPredicted RBP9.94□□□□□ -0.82
SMC3-202ENST00000462899 CHRNDQ07001 517 aa9.94□□□□□ -0.82
SMC3-202ENST00000462899 VGLL4Q14135 290 aa9.94□□□□□ -0.82
SMC3-202ENST00000462899 TAF1CQ15572 869 aaPredicted RBP9.94□□□□□ -0.82
SMC3-202ENST00000462899 CWF19L2Q2TBE0 894 aaKnown RBP9.94□□□□□ -0.82
SMC3-202ENST00000462899 SLC4A8Q2Y0W8 1093 aa9.94□□□□□ -0.82
SMC3-202ENST00000462899 KSR2Q6VAB6 950 aa9.94□□□□□ -0.82
SMC3-202ENST00000462899 C8orf58Q8NAV2 365 aa9.94□□□□□ -0.82
SMC3-202ENST00000462899 SPRYD3Q8NCJ5 442 aa9.94□□□□□ -0.82
SMC3-202ENST00000462899 ZFYVE28Q9HCC9 887 aa9.94□□□□□ -0.82
SMC3-202ENST00000462899 ZCCHC17Q9NP64 241 aaKnown RBP9.94□□□□□ -0.82
SMC3-202ENST00000462899 IFT57Q9NWB7 429 aa9.94□□□□□ -0.82
SMC3-202ENST00000462899 CDH23Q9H251 3354 aa9.94□□□□□ -0.82
SMC3-202ENST00000462899 DNAH12Q6ZR08 3092 aa9.93□□□□□ -0.82
SMC3-202ENST00000462899 CCL15-CCL14A0A0B4J2E2 113 aa9.93□□□□□ -0.82
SMC3-202ENST00000462899 PI4KAP2A4QPH2 592 aa9.93□□□□□ -0.82
SMC3-202ENST00000462899 MYO1BO43795 1136 aa9.93□□□□□ -0.82
SMC3-202ENST00000462899 DDX58O95786 925 aaKnown RBP9.93□□□□□ -0.82
SMC3-202ENST00000462899 GNRH1P01148 92 aa9.93□□□□□ -0.82
SMC3-202ENST00000462899 GTF2A2P52657 109 aa9.93□□□□□ -0.82
SMC3-202ENST00000462899 RALBP1Q15311 655 aa9.93□□□□□ -0.82
SMC3-202ENST00000462899 MTFR1Q15390 333 aa9.93□□□□□ -0.82
SMC3-202ENST00000462899 CCL15Q16663 113 aa9.93□□□□□ -0.82
SMC3-202ENST00000462899 PI4KAP1Q8N8J0 262 aa9.93□□□□□ -0.82
SMC3-202ENST00000462899 VEZTQ9HBM0 779 aa9.93□□□□□ -0.82
SMC3-202ENST00000462899 RYDENQ9NUL5 291 aaKnown RBP9.93□□□□□ -0.82
SMC3-202ENST00000462899 MYH13Q9UKX3 1938 aa9.93□□□□□ -0.82
SMC3-202ENST00000462899 FAM205AQ6ZU69 1335 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms