RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 PHKA1P46020 1223 aa19.74■□□□□ 0.75
ACTB-207ENST00000462494 HELBQ8NG08 1087 aaPredicted RBP19.74■□□□□ 0.75
ACTB-207ENST00000462494 NBPF3Q9H094 633 aa19.74■□□□□ 0.75
ACTB-207ENST00000462494 FAM177BA6PVY3 158 aa19.74■□□□□ 0.75
ACTB-207ENST00000462494 NDUFA8P51970 172 aa19.74■□□□□ 0.75
ACTB-207ENST00000462494 CCDC102BQ68D86 513 aa19.74■□□□□ 0.75
ACTB-207ENST00000462494 SYNE3Q6ZMZ3 975 aa19.74■□□□□ 0.75
ACTB-207ENST00000462494 TBC1D10CQ8IV04 446 aa19.74■□□□□ 0.75
ACTB-207ENST00000462494 FMR1NBQ8N0W7 255 aaPredicted RBP19.74■□□□□ 0.75
ACTB-207ENST00000462494 VGLL2Q8N8G2 317 aa19.74■□□□□ 0.75
ACTB-207ENST00000462494 ZNF532Q9HCE3 1301 aa19.74■□□□□ 0.75
ACTB-207ENST00000462494 RXRAP19793 462 aa19.73■□□□□ 0.75
ACTB-207ENST00000462494 CCDC144BQ3MJ40 725 aa19.73■□□□□ 0.75
ACTB-207ENST00000462494 CCDC144CPQ8IYA2 1237 aa19.73■□□□□ 0.75
ACTB-207ENST00000462494 NKX2-3Q8TAU0 364 aa19.73■□□□□ 0.75
ACTB-207ENST00000462494 MYH7P12883 1935 aa19.73■□□□□ 0.75
ACTB-207ENST00000462494 KIF28PB7ZC32 967 aa19.72■□□□□ 0.75
ACTB-207ENST00000462494 PDE8AO60658 829 aa19.72■□□□□ 0.75
ACTB-207ENST00000462494 MYSM1Q5VVJ2 828 aa19.72■□□□□ 0.75
ACTB-207ENST00000462494 CYB5R4Q7L1T6 521 aa19.72■□□□□ 0.75
ACTB-207ENST00000462494 KCNG4Q8TDN1 519 aa19.72■□□□□ 0.75
ACTB-207ENST00000462494 SPTLC2O15270 562 aa19.72■□□□□ 0.75
ACTB-207ENST00000462494 DZIP3Q86Y13 1208 aaKnown RBP19.72■□□□□ 0.75
ACTB-207ENST00000462494 DHX40Q8IX18 779 aaKnown RBP19.72■□□□□ 0.75
ACTB-207ENST00000462494 WWC3Q9ULE0 1092 aa19.72■□□□□ 0.75
ACTB-207ENST00000462494 ANGEL1Q9UNK9 670 aaKnown RBP19.72■□□□□ 0.75
ACTB-207ENST00000462494 AKAP11Q9UKA4 1901 aa19.71■□□□□ 0.75
ACTB-207ENST00000462494 PDE6AP16499 860 aa19.71■□□□□ 0.75
ACTB-207ENST00000462494 METAP2P50579 478 aaKnown RBP eCLIP19.71■□□□□ 0.758e-18■□□□□ 9.9
ACTB-207ENST00000462494 BRAPQ7Z569 592 aa19.71■□□□□ 0.75
ACTB-207ENST00000462494 CEP57L1Q8IYX8 460 aa19.71■□□□□ 0.75
ACTB-207ENST00000462494 CACTINQ8WUQ7 758 aaKnown RBP19.71■□□□□ 0.75
ACTB-207ENST00000462494 ZNF512BQ96KM6 892 aaPredicted RBP19.71■□□□□ 0.75
ACTB-207ENST00000462494 POLR3EQ9NVU0 708 aa19.71■□□□□ 0.75
ACTB-207ENST00000462494 B4E1Z4 1266 aa19.71■□□□□ 0.75
ACTB-207ENST00000462494 CDC25BP30305 580 aa19.71■□□□□ 0.75
ACTB-207ENST00000462494 UBE3CQ15386 1083 aa19.71■□□□□ 0.75
ACTB-207ENST00000462494 ZRSR1Q15695 479 aaKnown RBP19.71■□□□□ 0.75
ACTB-207ENST00000462494 SARM1Q6SZW1 724 aa19.71■□□□□ 0.75
ACTB-207ENST00000462494 AOPEPQ8N6M6 819 aa19.71■□□□□ 0.75
ACTB-207ENST00000462494 AIDAQ96BJ3 306 aa19.71■□□□□ 0.75
ACTB-207ENST00000462494 AIFM3Q96NN9 605 aa19.71■□□□□ 0.75
ACTB-207ENST00000462494 WDR19Q8NEZ3 1342 aa19.7■□□□□ 0.74
ACTB-207ENST00000462494 A0A0G2JS52 829 aa19.7■□□□□ 0.74
ACTB-207ENST00000462494 A0A1W2PQ27 194 aa19.7■□□□□ 0.74
ACTB-207ENST00000462494 A0A1W2PQ64 194 aa19.7■□□□□ 0.74
ACTB-207ENST00000462494 A0A1W2PQD8 194 aa19.7■□□□□ 0.74
ACTB-207ENST00000462494 GTF2F1P35269 517 aaKnown RBP eCLIP19.7■□□□□ 0.742e-13■■□□□ 12.1
ACTB-207ENST00000462494 ITGB4P16144 1822 aa19.7■□□□□ 0.74
ACTB-207ENST00000462494 YEATS4O95619 227 aa19.7■□□□□ 0.74
ACTB-207ENST00000462494 KIF23Q02241 960 aaPredicted RBP19.7■□□□□ 0.74
ACTB-207ENST00000462494 MTERF4Q7Z6M4 381 aaKnown RBP19.7■□□□□ 0.74
ACTB-207ENST00000462494 MICU3Q86XE3 530 aa19.7■□□□□ 0.74
ACTB-207ENST00000462494 C16orf45Q96MC5 204 aaPredicted RBP19.7■□□□□ 0.74
ACTB-207ENST00000462494 NAT10Q9H0A0 1025 aaKnown RBP19.7■□□□□ 0.74
ACTB-207ENST00000462494 ZMYM6O95789 1325 aa19.69■□□□□ 0.74
ACTB-207ENST00000462494 UBN2Q6ZU65 1347 aa19.69■□□□□ 0.74
ACTB-207ENST00000462494 RIOK3O14730 519 aaKnown RBP19.69■□□□□ 0.74
ACTB-207ENST00000462494 PUM3Q15397 648 aaKnown RBP19.69■□□□□ 0.74
ACTB-207ENST00000462494 NFXL1Q6ZNB6 911 aa19.69■□□□□ 0.74
ACTB-207ENST00000462494 ALG1Q9BT22 464 aa19.69■□□□□ 0.74
ACTB-207ENST00000462494 SENP2Q9HC62 589 aa19.69■□□□□ 0.74
ACTB-207ENST00000462494 INCENPQ9NQS7 918 aa19.69■□□□□ 0.74
ACTB-207ENST00000462494 BCL9O00512 1426 aa19.69■□□□□ 0.74
ACTB-207ENST00000462494 SNAP23O00161 211 aa19.68■□□□□ 0.74
ACTB-207ENST00000462494 SH2B2O14492 632 aaPredicted RBP19.68■□□□□ 0.74
ACTB-207ENST00000462494 UQCRFS1P1P0C7P4 283 aa19.68■□□□□ 0.74
ACTB-207ENST00000462494 ARID4AP29374 1257 aaPredicted RBP19.68■□□□□ 0.74
ACTB-207ENST00000462494 ANO1Q5XXA6 986 aa19.68■□□□□ 0.74
ACTB-207ENST00000462494 LPIN2Q92539 896 aa19.68■□□□□ 0.74
ACTB-207ENST00000462494 PHKBQ93100 1093 aa19.68■□□□□ 0.74
ACTB-207ENST00000462494 MRFAP1L1Q96HT8 127 aa19.68■□□□□ 0.74
ACTB-207ENST00000462494 MYO5AQ9Y4I1 1855 aaKnown RBP19.68■□□□□ 0.74
ACTB-207ENST00000462494 MARCKSP29966 332 aaPredicted RBP19.68■□□□□ 0.74
ACTB-207ENST00000462494 GNL2Q13823 731 aaKnown RBP19.68■□□□□ 0.74
ACTB-207ENST00000462494 ARID5BQ14865 1188 aa19.68■□□□□ 0.74
ACTB-207ENST00000462494 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.68■□□□□ 0.74
ACTB-207ENST00000462494 MYH3P11055 1940 aa19.68■□□□□ 0.74
ACTB-207ENST00000462494 NEDD4P46934 1319 aa19.67■□□□□ 0.74
ACTB-207ENST00000462494 EXOC5O00471 708 aa19.67■□□□□ 0.74
ACTB-207ENST00000462494 FILIP1Q7Z7B0 1213 aa19.67■□□□□ 0.74
ACTB-207ENST00000462494 KIAA1468Q9P260 1216 aa19.67■□□□□ 0.74
ACTB-207ENST00000462494 ATRNO75882 1429 aa19.67■□□□□ 0.74
ACTB-207ENST00000462494 TCRBV5S4A2TA0A5A2 114 aa19.67■□□□□ 0.74
ACTB-207ENST00000462494 BIN1O00499 593 aa19.67■□□□□ 0.74
ACTB-207ENST00000462494 CDC27P30260 824 aa19.67■□□□□ 0.74
ACTB-207ENST00000462494 APOA5Q6Q788 366 aa19.67■□□□□ 0.74
ACTB-207ENST00000462494 LRRC8AQ8IWT6 810 aa19.67■□□□□ 0.74
ACTB-207ENST00000462494 MAGEB6Q8N7X4 407 aa19.67■□□□□ 0.74
ACTB-207ENST00000462494 SPATA5Q8NB90 893 aa19.67■□□□□ 0.74
ACTB-207ENST00000462494 STRBPQ96SI9 672 aaKnown RBP19.67■□□□□ 0.74
ACTB-207ENST00000462494 MYL10Q9BUA6 226 aa19.67■□□□□ 0.74
ACTB-207ENST00000462494 LRP6O75581 1613 aa19.67■□□□□ 0.74
ACTB-207ENST00000462494 ERVV-1B6SEH8 477 aa19.66■□□□□ 0.74
ACTB-207ENST00000462494 CDKL5O76039 1030 aa19.66■□□□□ 0.74
ACTB-207ENST00000462494 ZNF202O95125 648 aa19.66■□□□□ 0.74
ACTB-207ENST00000462494 TPD52L1Q16890 204 aaPredicted RBP19.66■□□□□ 0.74
ACTB-207ENST00000462494 DPCR1Q3MIW9 517 aa19.66■□□□□ 0.74
ACTB-207ENST00000462494 CPLX2Q6PUV4 134 aaKnown RBP19.66■□□□□ 0.74
ACTB-207ENST00000462494 ZNF710Q8N1W2 664 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms