RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 ZNF804BA4D1E1 1349 aa8.06□□□□□ -1.12
MSH2-204ENST00000461394 ZNF213O14771 459 aa8.06□□□□□ -1.12
MSH2-204ENST00000461394 PLSCR1O15162 318 aa8.06□□□□□ -1.12
MSH2-204ENST00000461394 MBD4O95243 580 aa8.06□□□□□ -1.12
MSH2-204ENST00000461394 CYP21A2P08686 494 aa8.06□□□□□ -1.12
MSH2-204ENST00000461394 HMGB1P09429 215 aaKnown RBP8.06□□□□□ -1.12
MSH2-204ENST00000461394 HIBADHP31937 336 aaKnown RBP8.06□□□□□ -1.12
MSH2-204ENST00000461394 DDIT3P35638 169 aa8.06□□□□□ -1.12
MSH2-204ENST00000461394 HAND2P61296 217 aa8.06□□□□□ -1.12
MSH2-204ENST00000461394 STK3Q13188 491 aa8.06□□□□□ -1.12
MSH2-204ENST00000461394 SF3B2Q13435 895 aaKnown RBP8.06□□□□□ -1.12
MSH2-204ENST00000461394 UBE3CQ15386 1083 aa8.06□□□□□ -1.12
MSH2-204ENST00000461394 ZNF827Q17R98 1081 aa8.06□□□□□ -1.12
MSH2-204ENST00000461394 Q6ZUG5 572 aa8.06□□□□□ -1.12
MSH2-204ENST00000461394 RALYLQ86SE5 291 aaKnown RBP8.06□□□□□ -1.12
MSH2-204ENST00000461394 FLAD1Q8NFF5 587 aa8.06□□□□□ -1.12
MSH2-204ENST00000461394 INTS4Q96HW7 963 aaKnown RBP8.06□□□□□ -1.12
MSH2-204ENST00000461394 PARP3Q9Y6F1 533 aa8.06□□□□□ -1.12
MSH2-204ENST00000461394 MAST2Q6P0Q8 1798 aa8.06□□□□□ -1.12
MSH2-204ENST00000461394 RGPD3A6NKT7 1758 aaPredicted RBP8.05□□□□□ -1.12
MSH2-204ENST00000461394 RGPD4Q7Z3J3 1758 aa8.05□□□□□ -1.12
MSH2-204ENST00000461394 E7EWF7 191 aa8.05□□□□□ -1.12
MSH2-204ENST00000461394 CYP7A1P22680 504 aa8.05□□□□□ -1.12
MSH2-204ENST00000461394 TRDNQ13061 729 aa8.05□□□□□ -1.12
MSH2-204ENST00000461394 TSGA10IPQ3SY00 556 aa8.05□□□□□ -1.12
MSH2-204ENST00000461394 MSL1Q68DK7 614 aa8.05□□□□□ -1.12
MSH2-204ENST00000461394 TTLL5Q6EMB2 1281 aa8.05□□□□□ -1.12
MSH2-204ENST00000461394 NECAB1Q8N987 351 aa8.05□□□□□ -1.12
MSH2-204ENST00000461394 MFRPQ9BY79 579 aa8.05□□□□□ -1.12
MSH2-204ENST00000461394 LRRC2Q9BYS8 371 aa8.05□□□□□ -1.12
MSH2-204ENST00000461394 NACAP1Q9BZK3 213 aa8.05□□□□□ -1.12
MSH2-204ENST00000461394 NAPBQ9H115 298 aa8.05□□□□□ -1.12
MSH2-204ENST00000461394 TMX4Q9H1E5 349 aaPredicted RBP8.05□□□□□ -1.12
MSH2-204ENST00000461394 ARMT1Q9H993 441 aa8.05□□□□□ -1.12
MSH2-204ENST00000461394 TAF6LQ9Y6J9 622 aa8.05□□□□□ -1.12
MSH2-204ENST00000461394 XDHP47989 1333 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 MAGEB6P1A0A0J9YX57 407 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 POLRMTO00411 1230 aaKnown RBP8.04□□□□□ -1.12
MSH2-204ENST00000461394 UFL1O94874 794 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 LARGE1O95461 756 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 GNAT2P19087 354 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 GJB2P29033 226 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 TM4SF1P30408 202 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 TDO2P48775 406 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 DDR1Q08345 913 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 MCTP1Q6DN14 999 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 NAA16Q6N069 864 aaPredicted RBP8.04□□□□□ -1.12
MSH2-204ENST00000461394 DHX32Q7L7V1 743 aaKnown RBP8.04□□□□□ -1.12
MSH2-204ENST00000461394 ZNF804AQ7Z570 1209 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 COL23A1Q86Y22 540 aaPredicted RBP8.04□□□□□ -1.12
MSH2-204ENST00000461394 NLGN1Q8N2Q7 840 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 MIGA1Q8NAN2 632 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 FAM84BQ96KN1 310 aaPredicted RBP8.04□□□□□ -1.12
MSH2-204ENST00000461394 TOMM22Q9NS69 142 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 STK32BQ9NY57 414 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 TPCN1Q9ULQ1 816 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 NSFL1CQ9UNZ2 370 aaKnown RBP8.04□□□□□ -1.12
MSH2-204ENST00000461394 CLEC11AQ9Y240 323 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 LEMD3Q9Y2U8 911 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 SLC4A4Q9Y6R1 1079 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 ANKRD31Q8N7Z5 1873 aa8.04□□□□□ -1.12
MSH2-204ENST00000461394 WDR33Q9C0J8 1336 aaKnown RBP8.03□□□□□ -1.12
MSH2-204ENST00000461394 A0A0G2JLW4 131 aa8.03□□□□□ -1.12
MSH2-204ENST00000461394 WTIPA6NIX2 430 aaPredicted RBP8.03□□□□□ -1.12
MSH2-204ENST00000461394 C6orf229H3BNL8 230 aa8.03□□□□□ -1.12
MSH2-204ENST00000461394 PPEF1O14829 653 aaPredicted RBP8.03□□□□□ -1.12
MSH2-204ENST00000461394 BAG4O95429 457 aaKnown RBP8.03□□□□□ -1.12
MSH2-204ENST00000461394 FGAP02671 866 aa8.03□□□□□ -1.12
MSH2-204ENST00000461394 NCLP19338 710 aaKnown RBP8.03□□□□□ -1.12
MSH2-204ENST00000461394 ATP2B4P23634 1241 aa8.03□□□□□ -1.12
MSH2-204ENST00000461394 KLRK1P26718 216 aa8.03□□□□□ -1.12
MSH2-204ENST00000461394 TOB2Q14106 344 aaPredicted RBP8.03□□□□□ -1.12
MSH2-204ENST00000461394 ME3Q16798 604 aa8.03□□□□□ -1.12
MSH2-204ENST00000461394 SPTY2D1Q68D10 685 aaPredicted RBP8.03□□□□□ -1.12
MSH2-204ENST00000461394 POTEAQ6S8J7 498 aa8.03□□□□□ -1.12
MSH2-204ENST00000461394 STOX1Q6ZVD7 989 aa8.03□□□□□ -1.12
MSH2-204ENST00000461394 CHST3Q7LGC8 479 aa8.03□□□□□ -1.12
MSH2-204ENST00000461394 FBXO33Q7Z6M2 555 aa8.03□□□□□ -1.12
MSH2-204ENST00000461394 DZIP1Q86YF9 867 aaKnown RBP8.03□□□□□ -1.12
MSH2-204ENST00000461394 NCOA7Q8NI08 942 aa8.03□□□□□ -1.12
MSH2-204ENST00000461394 BRF1Q92994 677 aa8.03□□□□□ -1.12
MSH2-204ENST00000461394 AKT1S1Q96B36 256 aa8.03□□□□□ -1.12
MSH2-204ENST00000461394 NOL10Q9BSC4 688 aaKnown RBP8.03□□□□□ -1.12
MSH2-204ENST00000461394 ALDH8A1Q9H2A2 487 aaPredicted RBP8.03□□□□□ -1.12
MSH2-204ENST00000461394 GGA1Q9UJY5 639 aa8.03□□□□□ -1.12
MSH2-204ENST00000461394 JAG2Q9Y219 1238 aa8.03□□□□□ -1.12
MSH2-204ENST00000461394 TCRBV5S4A2TA0A5A2 114 aa8.02□□□□□ -1.13
MSH2-204ENST00000461394 VPS37CA5D8V6 355 aaPredicted RBP8.02□□□□□ -1.13
MSH2-204ENST00000461394 PATL2C9JE40 543 aaKnown RBP8.02□□□□□ -1.13
MSH2-204ENST00000461394 G3V3G9 751 aa8.02□□□□□ -1.13
MSH2-204ENST00000461394 PRC1O43663 620 aa8.02□□□□□ -1.13
MSH2-204ENST00000461394 TRAK2O60296 914 aa8.02□□□□□ -1.13
MSH2-204ENST00000461394 BBOX1O75936 387 aa8.02□□□□□ -1.13
MSH2-204ENST00000461394 MMP10P09238 476 aa8.02□□□□□ -1.13
MSH2-204ENST00000461394 MCM5P33992 734 aa8.02□□□□□ -1.13
MSH2-204ENST00000461394 DEKP35659 375 aaKnown RBP8.02□□□□□ -1.13
MSH2-204ENST00000461394 PDE6BP35913 854 aa8.02□□□□□ -1.13
MSH2-204ENST00000461394 GPSM2P81274 684 aa8.02□□□□□ -1.13
MSH2-204ENST00000461394 EN1Q05925 392 aaPredicted RBP8.02□□□□□ -1.13
MSH2-204ENST00000461394 APOBRQ0VD83 1088 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms