RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 ZFYVE28Q9HCC9 887 aa17.21■□□□□ 0.35
SCAMP4-206ENST00000460767 PTCH2Q9Y6C5 1203 aa17.21■□□□□ 0.35
SCAMP4-206ENST00000460767 CLRN2A0PK11 232 aa17.2■□□□□ 0.34
SCAMP4-206ENST00000460767 GNRH1P01148 92 aa17.2■□□□□ 0.34
SCAMP4-206ENST00000460767 KCNJ4P48050 445 aa17.2■□□□□ 0.34
SCAMP4-206ENST00000460767 SPDYE2Q495Y8 402 aa17.2■□□□□ 0.34
SCAMP4-206ENST00000460767 EPHA10Q5JZY3 1008 aa17.2■□□□□ 0.34
SCAMP4-206ENST00000460767 ZNF804AQ7Z570 1209 aa17.2■□□□□ 0.34
SCAMP4-206ENST00000460767 NOB1Q9ULX3 412 aaKnown RBP17.2■□□□□ 0.34
SCAMP4-206ENST00000460767 PCDHAC2Q9Y5I4 1007 aa17.2■□□□□ 0.34
SCAMP4-206ENST00000460767 NBPF7P0C2Y1 421 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-206ENST00000460767 GTF2A2P52657 109 aa17.19■□□□□ 0.34
SCAMP4-206ENST00000460767 PRMT2P55345 433 aa17.19■□□□□ 0.34
SCAMP4-206ENST00000460767 TAF1CQ15572 869 aaPredicted RBP17.19■□□□□ 0.34
SCAMP4-206ENST00000460767 BRI3BPQ8WY22 251 aa17.19■□□□□ 0.34
SCAMP4-206ENST00000460767 USP44Q9H0E7 712 aa17.19■□□□□ 0.34
SCAMP4-206ENST00000460767 VEZTQ9HBM0 779 aa17.19■□□□□ 0.34
SCAMP4-206ENST00000460767 CENPFP49454 3210 aa17.19■□□□□ 0.34
SCAMP4-206ENST00000460767 FAM205AQ6ZU69 1335 aa17.19■□□□□ 0.34
SCAMP4-206ENST00000460767 KIF16BQ96L93 1317 aa17.19■□□□□ 0.34
SCAMP4-206ENST00000460767 RABL6Q3YEC7 729 aaPredicted RBP17.18■□□□□ 0.34
SCAMP4-206ENST00000460767 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.18■□□□□ 0.34
SCAMP4-206ENST00000460767 TEPSINQ96N21 525 aa17.18■□□□□ 0.34
SCAMP4-206ENST00000460767 SERPINA10Q9UK55 444 aa17.18■□□□□ 0.34
SCAMP4-206ENST00000460767 AOX1Q06278 1338 aa17.18■□□□□ 0.34
SCAMP4-206ENST00000460767 ANKRD18BA2A2Z9 1011 aa17.17■□□□□ 0.34
SCAMP4-206ENST00000460767 H0YGN5 161 aa17.17■□□□□ 0.34
SCAMP4-206ENST00000460767 BCAR3O75815 825 aa17.17■□□□□ 0.34
SCAMP4-206ENST00000460767 SLC4A8Q2Y0W8 1093 aa17.17■□□□□ 0.34
SCAMP4-206ENST00000460767 SLC4A10Q6U841 1118 aa17.17■□□□□ 0.34
SCAMP4-206ENST00000460767 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.17■□□□□ 0.34
SCAMP4-206ENST00000460767 ELP3Q9H9T3 547 aa17.17■□□□□ 0.34
SCAMP4-206ENST00000460767 ZSWIM8A7E2V4 1837 aa17.17■□□□□ 0.34
SCAMP4-206ENST00000460767 CCL15-CCL14A0A0B4J2E2 113 aa17.16■□□□□ 0.34
SCAMP4-206ENST00000460767 TLR2O60603 784 aa17.16■□□□□ 0.34
SCAMP4-206ENST00000460767 TRIM27P14373 513 aa17.16■□□□□ 0.34
SCAMP4-206ENST00000460767 VGLL4Q14135 290 aa17.16■□□□□ 0.34
SCAMP4-206ENST00000460767 CCL15Q16663 113 aa17.16■□□□□ 0.34
SCAMP4-206ENST00000460767 SUCLG2Q96I99 432 aa17.16■□□□□ 0.34
SCAMP4-206ENST00000460767 API5Q9BZZ5 524 aaKnown RBP17.16■□□□□ 0.34
SCAMP4-206ENST00000460767 SPDYE5A6NIY4 337 aa17.15■□□□□ 0.34
SCAMP4-206ENST00000460767 WDHD1O75717 1129 aaPredicted RBP17.15■□□□□ 0.34
SCAMP4-206ENST00000460767 MAP3K9P80192 1104 aa17.15■□□□□ 0.34
SCAMP4-206ENST00000460767 LACTBP83111 547 aaPredicted RBP17.15■□□□□ 0.34
SCAMP4-206ENST00000460767 FAM43AQ8N2R8 423 aa17.15■□□□□ 0.34
SCAMP4-206ENST00000460767 ANKRD44Q8N8A2 993 aa17.15■□□□□ 0.34
SCAMP4-206ENST00000460767 PRO3102Q9H379 93 aa17.15■□□□□ 0.34
SCAMP4-206ENST00000460767 ZNF70Q9UC06 446 aaPredicted RBP17.15■□□□□ 0.34
SCAMP4-206ENST00000460767 F8W031 263 aaPredicted RBP17.14■□□□□ 0.33
SCAMP4-206ENST00000460767 ATF7IPQ6VMQ6 1270 aa17.14■□□□□ 0.33
SCAMP4-206ENST00000460767 SHISA4Q96DD7 197 aa17.14■□□□□ 0.33
SCAMP4-206ENST00000460767 C9orf78Q9NZ63 289 aaPredicted RBP17.14■□□□□ 0.33
SCAMP4-206ENST00000460767 SNAP23O00161 211 aa17.13■□□□□ 0.33
SCAMP4-206ENST00000460767 TAF5LO75529 589 aa17.13■□□□□ 0.33
SCAMP4-206ENST00000460767 TNNI2P48788 182 aa17.13■□□□□ 0.33
SCAMP4-206ENST00000460767 IFIT5Q13325 482 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-206ENST00000460767 KIF22Q14807 665 aa17.13■□□□□ 0.33
SCAMP4-206ENST00000460767 UBE2Q1Q7Z7E8 422 aa17.13■□□□□ 0.33
SCAMP4-206ENST00000460767 TDRD7Q8NHU6 1098 aaKnown RBP17.13■□□□□ 0.33
SCAMP4-206ENST00000460767 NKX2-3Q8TAU0 364 aa17.13■□□□□ 0.33
SCAMP4-206ENST00000460767 CSADQ9Y600 493 aa17.13■□□□□ 0.33
SCAMP4-206ENST00000460767 RPAP1Q9BWH6 1393 aaPredicted RBP17.13■□□□□ 0.33
SCAMP4-206ENST00000460767 CETPP11597 493 aa17.12■□□□□ 0.33
SCAMP4-206ENST00000460767 RBM5P52756 815 aaKnown RBP eCLIP17.12■□□□□ 0.33
SCAMP4-206ENST00000460767 MFSD14BQ5SR56 506 aa17.12■□□□□ 0.33
SCAMP4-206ENST00000460767 LMBR1LQ6UX01 489 aa17.12■□□□□ 0.33
SCAMP4-206ENST00000460767 CHRDL2Q6WN34 429 aa17.12■□□□□ 0.33
SCAMP4-206ENST00000460767 CNKSR2Q8WXI2 1034 aa17.12■□□□□ 0.33
SCAMP4-206ENST00000460767 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.12■□□□□ 0.33
SCAMP4-206ENST00000460767 TNNQ9UQP3 1299 aa17.12■□□□□ 0.33
SCAMP4-206ENST00000460767 TRIOBPQ9H2D6 2365 aa17.11■□□□□ 0.33
SCAMP4-206ENST00000460767 A0A1W2PPC1 479 aa17.11■□□□□ 0.33
SCAMP4-206ENST00000460767 HDLBPQ00341 1268 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-206ENST00000460767 ERO1BQ86YB8 467 aa17.11■□□□□ 0.33
SCAMP4-206ENST00000460767 CDAN1Q8IWY9 1227 aa17.11■□□□□ 0.33
SCAMP4-206ENST00000460767 DZIP1LQ8IYY4 767 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-206ENST00000460767 HELBQ8NG08 1087 aaPredicted RBP17.11■□□□□ 0.33
SCAMP4-206ENST00000460767 SH3TC2Q8TF17 1288 aa17.11■□□□□ 0.33
SCAMP4-206ENST00000460767 BICC1Q9H694 974 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-206ENST00000460767 TDRD3Q9H7E2 651 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-206ENST00000460767 RBM27Q9P2N5 1060 aaKnown RBP17.11■□□□□ 0.33
SCAMP4-206ENST00000460767 SNCAIPQ9Y6H5 919 aa17.11■□□□□ 0.33
SCAMP4-206ENST00000460767 IPO8O15397 1037 aaKnown RBP17.1■□□□□ 0.33
SCAMP4-206ENST00000460767 ARHGAP39Q9C0H5 1083 aa17.1■□□□□ 0.33
SCAMP4-206ENST00000460767 TTF2Q9UNY4 1162 aaKnown RBP17.1■□□□□ 0.33
SCAMP4-206ENST00000460767 BTBD19C9JJ37 291 aa17.09■□□□□ 0.33
SCAMP4-206ENST00000460767 GJA8P48165 433 aa17.09■□□□□ 0.33
SCAMP4-206ENST00000460767 PPIL2Q13356 520 aa17.09■□□□□ 0.33
SCAMP4-206ENST00000460767 SNAPC2Q13487 334 aa17.09■□□□□ 0.33
SCAMP4-206ENST00000460767 UBE4AQ14139 1066 aa17.09■□□□□ 0.33
SCAMP4-206ENST00000460767 C17orf99Q6UX52 265 aa17.09■□□□□ 0.33
SCAMP4-206ENST00000460767 HTATIP2Q9BUP3 242 aa17.09■□□□□ 0.33
SCAMP4-206ENST00000460767 TMEM39BQ9GZU3 492 aa17.09■□□□□ 0.33
SCAMP4-206ENST00000460767 ADGRA2Q96PE1 1338 aa17.09■□□□□ 0.33
SCAMP4-206ENST00000460767 GJB1P08034 283 aa17.08■□□□□ 0.32
SCAMP4-206ENST00000460767 CAPN2P17655 700 aa17.08■□□□□ 0.32
SCAMP4-206ENST00000460767 CRKP46108 304 aa17.08■□□□□ 0.32
SCAMP4-206ENST00000460767 RFX5P48382 616 aaPredicted RBP17.08■□□□□ 0.32
SCAMP4-206ENST00000460767 FKBP1CQ5VVH2 108 aa17.08■□□□□ 0.32
SCAMP4-206ENST00000460767 FAM83AQ86UY5 434 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms