RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 CCDC102BQ68D86 513 aa16.68■□□□□ 0.26
ERCC3-205ENST00000460485 GTF3C6Q969F1 213 aa16.68■□□□□ 0.26
ERCC3-205ENST00000460485 PCDH10Q9P2E7 1040 aa16.68■□□□□ 0.26
ERCC3-205ENST00000460485 TPCN1Q9ULQ1 816 aa16.68■□□□□ 0.26
ERCC3-205ENST00000460485 MAP3K12Q12852 859 aa16.67■□□□□ 0.26
ERCC3-205ENST00000460485 CCDC85AQ96PX6 553 aaPredicted RBP16.67■□□□□ 0.26
ERCC3-205ENST00000460485 PRDM10Q9NQV6 1147 aa16.67■□□□□ 0.26
ERCC3-205ENST00000460485 GNL3LQ9NVN8 582 aaKnown RBP16.67■□□□□ 0.26
ERCC3-205ENST00000460485 PDS5AQ29RF7 1337 aaKnown RBP16.67■□□□□ 0.26
ERCC3-205ENST00000460485 FGD1P98174 961 aa16.66■□□□□ 0.26
ERCC3-205ENST00000460485 CCDC129Q6ZRS4 1044 aa16.66■□□□□ 0.26
ERCC3-205ENST00000460485 SYNE4Q8N205 404 aa16.66■□□□□ 0.26
ERCC3-205ENST00000460485 SEC62Q99442 399 aaKnown RBP16.66■□□□□ 0.26
ERCC3-205ENST00000460485 NDUFB9Q9Y6M9 179 aa16.66■□□□□ 0.26
ERCC3-205ENST00000460485 CCDC88AQ3V6T2 1871 aa16.65■□□□□ 0.26
ERCC3-205ENST00000460485 E7EWF7 191 aa16.65■□□□□ 0.26
ERCC3-205ENST00000460485 M0R2C6 588 aa16.65■□□□□ 0.26
ERCC3-205ENST00000460485 SEMA3EO15041 775 aa16.65■□□□□ 0.26
ERCC3-205ENST00000460485 PFKFB2O60825 505 aa16.65■□□□□ 0.26
ERCC3-205ENST00000460485 GNAT2P19087 354 aa16.65■□□□□ 0.26
ERCC3-205ENST00000460485 LMNB1P20700 586 aa16.65■□□□□ 0.26
ERCC3-205ENST00000460485 UBE4AQ14139 1066 aa16.65■□□□□ 0.26
ERCC3-205ENST00000460485 ALX1Q15699 326 aa16.65■□□□□ 0.26
ERCC3-205ENST00000460485 ANKRD18AQ8IVF6 992 aa16.65■□□□□ 0.26
ERCC3-205ENST00000460485 SPATA5Q8NB90 893 aa16.65■□□□□ 0.26
ERCC3-205ENST00000460485 OSBP2Q969R2 916 aa16.65■□□□□ 0.26
ERCC3-205ENST00000460485 ZNF274Q96GC6 653 aaPredicted RBP16.65■□□□□ 0.26
ERCC3-205ENST00000460485 BSDC1Q9NW68 430 aaPredicted RBP16.65■□□□□ 0.26
ERCC3-205ENST00000460485 GPAA1O43292 621 aa16.64■□□□□ 0.25
ERCC3-205ENST00000460485 DHX16O60231 1041 aaKnown RBP16.64■□□□□ 0.25
ERCC3-205ENST00000460485 ZPR1O75312 459 aa16.64■□□□□ 0.25
ERCC3-205ENST00000460485 PRPF40AO75400 957 aaKnown RBP16.64■□□□□ 0.25
ERCC3-205ENST00000460485 LARGE1O95461 756 aa16.64■□□□□ 0.25
ERCC3-205ENST00000460485 HCLS1P14317 486 aaPredicted RBP16.64■□□□□ 0.25
ERCC3-205ENST00000460485 CPA1P15085 419 aa16.64■□□□□ 0.25
ERCC3-205ENST00000460485 EVCP57679 992 aa16.64■□□□□ 0.25
ERCC3-205ENST00000460485 EXOSC10Q01780 885 aaKnown RBP16.64■□□□□ 0.25
ERCC3-205ENST00000460485 Q6ZUG5 572 aa16.64■□□□□ 0.25
ERCC3-205ENST00000460485 GZF1Q9H116 711 aaPredicted RBP16.64■□□□□ 0.25
ERCC3-205ENST00000460485 GRPEL1Q9HAV7 217 aa16.64■□□□□ 0.25
ERCC3-205ENST00000460485 CREBZFQ9NS37 354 aa16.64■□□□□ 0.25
ERCC3-205ENST00000460485 MTMR6Q9Y217 621 aa16.64■□□□□ 0.25
ERCC3-205ENST00000460485 LETM1O95202 739 aaPredicted RBP16.63■□□□□ 0.25
ERCC3-205ENST00000460485 SCARF1Q14162 830 aa16.63■□□□□ 0.25
ERCC3-205ENST00000460485 LARP1BQ659C4 914 aaKnown RBP16.63■□□□□ 0.25
ERCC3-205ENST00000460485 RALYLQ86SE5 291 aaKnown RBP16.63■□□□□ 0.25
ERCC3-205ENST00000460485 NCOA7Q8NI08 942 aa16.63■□□□□ 0.25
ERCC3-205ENST00000460485 ZNF804BA4D1E1 1349 aa16.63■□□□□ 0.25
ERCC3-205ENST00000460485 ELP1O95163 1332 aa16.63■□□□□ 0.25
ERCC3-205ENST00000460485 PDE6AP16499 860 aa16.62■□□□□ 0.25
ERCC3-205ENST00000460485 CHRNA5P30532 468 aa16.62■□□□□ 0.25
ERCC3-205ENST00000460485 MCM5P33992 734 aa16.62■□□□□ 0.25
ERCC3-205ENST00000460485 PHKA1P46020 1223 aa16.62■□□□□ 0.25
ERCC3-205ENST00000460485 UBE2HP62256 183 aa16.62■□□□□ 0.25
ERCC3-205ENST00000460485 TRDNQ13061 729 aa16.62■□□□□ 0.25
ERCC3-205ENST00000460485 SLC9C2Q5TAH2 1124 aa16.62■□□□□ 0.25
ERCC3-205ENST00000460485 ANP32BQ92688 251 aaKnown RBP16.62■□□□□ 0.25
ERCC3-205ENST00000460485 SETDB2Q96T68 719 aa16.62■□□□□ 0.25
ERCC3-205ENST00000460485 MTA3Q9BTC8 594 aa16.62■□□□□ 0.25
ERCC3-205ENST00000460485 ANKRD2Q9GZV1 360 aa16.62■□□□□ 0.25
ERCC3-205ENST00000460485 ZSCAN16Q9H4T2 348 aaPredicted RBP16.62■□□□□ 0.25
ERCC3-205ENST00000460485 ZNF213O14771 459 aa16.61■□□□□ 0.25
ERCC3-205ENST00000460485 GTF2E1P29083 439 aaPredicted RBP16.61■□□□□ 0.25
ERCC3-205ENST00000460485 TM4SF1P30408 202 aa16.61■□□□□ 0.25
ERCC3-205ENST00000460485 KRT85P78386 507 aa16.61■□□□□ 0.25
ERCC3-205ENST00000460485 CHRNDQ07001 517 aa16.61■□□□□ 0.25
ERCC3-205ENST00000460485 ST3GAL1Q11201 340 aa16.61■□□□□ 0.25
ERCC3-205ENST00000460485 ATL3Q6DD88 541 aa16.61■□□□□ 0.25
ERCC3-205ENST00000460485 DPY19L2Q6NUT2 758 aa16.61■□□□□ 0.25
ERCC3-205ENST00000460485 TPTE2Q6XPS3 522 aa16.61■□□□□ 0.25
ERCC3-205ENST00000460485 STOX1Q6ZVD7 989 aa16.61■□□□□ 0.25
ERCC3-205ENST00000460485 SMARCC2Q8TAQ2 1214 aa16.61■□□□□ 0.25
ERCC3-205ENST00000460485 POTECB2RU33 542 aa16.6■□□□□ 0.25
ERCC3-205ENST00000460485 IDH1O75874 414 aaKnown RBP16.6■□□□□ 0.25
ERCC3-205ENST00000460485 NT5C2P49902 561 aa16.6■□□□□ 0.25
ERCC3-205ENST00000460485 DDR1Q08345 913 aa16.6■□□□□ 0.25
ERCC3-205ENST00000460485 ZSCAN23Q3MJ62 389 aa16.6■□□□□ 0.25
ERCC3-205ENST00000460485 NAA16Q6N069 864 aaPredicted RBP16.6■□□□□ 0.25
ERCC3-205ENST00000460485 CAVIN1Q6NZI2 390 aaKnown RBP16.6■□□□□ 0.25
ERCC3-205ENST00000460485 BRF1Q92994 677 aa16.6■□□□□ 0.25
ERCC3-205ENST00000460485 AIDAQ96BJ3 306 aa16.6■□□□□ 0.25
ERCC3-205ENST00000460485 NLRP3Q96P20 1036 aa16.6■□□□□ 0.25
ERCC3-205ENST00000460485 SCAND2PQ9GZW5 306 aaPredicted RBP16.6■□□□□ 0.25
ERCC3-205ENST00000460485 TCRBV5S4A2TA0A5A2 114 aa16.59■□□□□ 0.25
ERCC3-205ENST00000460485 POLRMTO00411 1230 aaKnown RBP16.59■□□□□ 0.25
ERCC3-205ENST00000460485 FGAP02671 866 aa16.59■□□□□ 0.25
ERCC3-205ENST00000460485 RASGRF1Q13972 1273 aa16.59■□□□□ 0.25
ERCC3-205ENST00000460485 CAVIN4Q5BKX8 364 aa16.59■□□□□ 0.25
ERCC3-205ENST00000460485 NBPF5PQ86XG9 351 aaPredicted RBP16.59■□□□□ 0.25
ERCC3-205ENST00000460485 NACAP1Q9BZK3 213 aa16.59■□□□□ 0.25
ERCC3-205ENST00000460485 PUS7LQ9H0K6 701 aaKnown RBP16.59■□□□□ 0.25
ERCC3-205ENST00000460485 CNNM2Q9H8M5 875 aa16.59■□□□□ 0.25
ERCC3-205ENST00000460485 PIH1D3Q9NQM4 214 aaKnown RBP16.59■□□□□ 0.25
ERCC3-205ENST00000460485 SEC31BQ9NQW1 1179 aa16.59■□□□□ 0.25
ERCC3-205ENST00000460485 DENND2AQ9ULE3 1009 aa16.59■□□□□ 0.25
ERCC3-205ENST00000460485 ZNF532Q9HCE3 1301 aa16.59■□□□□ 0.25
ERCC3-205ENST00000460485 LAMB1P07942 1786 aa16.59■□□□□ 0.25
ERCC3-205ENST00000460485 VPS37CA5D8V6 355 aaPredicted RBP16.58■□□□□ 0.24
ERCC3-205ENST00000460485 FOXN1O15353 648 aa16.58■□□□□ 0.24
ERCC3-205ENST00000460485 RASSF7Q02833 373 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms