RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 AIDAQ96BJ3 306 aa9.55□□□□□ -0.88
SFPQ-202ENST00000460428 RIOK1Q9BRS2 568 aaKnown RBP9.55□□□□□ -0.88
SFPQ-202ENST00000460428 LLPHQ9BRT6 129 aaKnown RBP9.55□□□□□ -0.88
SFPQ-202ENST00000460428 LRP2BPQ9P2M1 347 aa9.55□□□□□ -0.88
SFPQ-202ENST00000460428 WDR33Q9C0J8 1336 aaKnown RBP9.55□□□□□ -0.88
SFPQ-202ENST00000460428 TIAM2Q8IVF5 1701 aa9.54□□□□□ -0.88
SFPQ-202ENST00000460428 A0A0G2JLW4 131 aa9.54□□□□□ -0.88
SFPQ-202ENST00000460428 NPHP1O15259 732 aa9.54□□□□□ -0.88
SFPQ-202ENST00000460428 IL1R1P14778 569 aa9.54□□□□□ -0.88
SFPQ-202ENST00000460428 KLRK1P26718 216 aa9.54□□□□□ -0.88
SFPQ-202ENST00000460428 SLC15A2Q16348 729 aa9.54□□□□□ -0.88
SFPQ-202ENST00000460428 VPS37DQ86XT2 251 aa9.54□□□□□ -0.88
SFPQ-202ENST00000460428 SMARCC2Q8TAQ2 1214 aa9.54□□□□□ -0.88
SFPQ-202ENST00000460428 WDR66Q8TBY9 1149 aa9.54□□□□□ -0.88
SFPQ-202ENST00000460428 ZNF384Q8TF68 577 aa9.54□□□□□ -0.88
SFPQ-202ENST00000460428 GTF3C6Q969F1 213 aa9.54□□□□□ -0.88
SFPQ-202ENST00000460428 NSUN4Q96CB9 384 aaKnown RBP9.54□□□□□ -0.88
SFPQ-202ENST00000460428 NBPF3Q9H094 633 aa9.54□□□□□ -0.88
SFPQ-202ENST00000460428 EPB41L4AQ9HCS5 686 aaPredicted RBP9.54□□□□□ -0.88
SFPQ-202ENST00000460428 ANAPC4Q9UJX5 808 aa9.54□□□□□ -0.88
SFPQ-202ENST00000460428 SMC3Q9UQE7 1217 aa9.54□□□□□ -0.88
SFPQ-202ENST00000460428 MAST2Q6P0Q8 1798 aa9.54□□□□□ -0.88
SFPQ-202ENST00000460428 MBD4O95243 580 aa9.53□□□□□ -0.88
SFPQ-202ENST00000460428 FGRP09769 529 aa9.53□□□□□ -0.88
SFPQ-202ENST00000460428 SRGNP10124 158 aa9.53□□□□□ -0.88
SFPQ-202ENST00000460428 NPR1P16066 1061 aa9.53□□□□□ -0.88
SFPQ-202ENST00000460428 SYT1P21579 422 aa9.53□□□□□ -0.88
SFPQ-202ENST00000460428 ALDH1B1P30837 517 aa9.53□□□□□ -0.88
SFPQ-202ENST00000460428 MCM5P33992 734 aa9.53□□□□□ -0.88
SFPQ-202ENST00000460428 PDE6BP35913 854 aa9.53□□□□□ -0.88
SFPQ-202ENST00000460428 NT5C2P49902 561 aa9.53□□□□□ -0.88
SFPQ-202ENST00000460428 GPSM2P81274 684 aa9.53□□□□□ -0.88
SFPQ-202ENST00000460428 SPTY2D1Q68D10 685 aaPredicted RBP9.53□□□□□ -0.88
SFPQ-202ENST00000460428 TXNRD3Q86VQ6 643 aa9.53□□□□□ -0.88
SFPQ-202ENST00000460428 CCDC83Q8IWF9 413 aa9.53□□□□□ -0.88
SFPQ-202ENST00000460428 NACAP1Q9BZK3 213 aa9.53□□□□□ -0.88
SFPQ-202ENST00000460428 ATP6V0A2Q9Y487 856 aa9.53□□□□□ -0.88
SFPQ-202ENST00000460428 MYH13Q9UKX3 1938 aa9.52□□□□□ -0.88
SFPQ-202ENST00000460428 GOLGA6L22H0YM25 854 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 STX6O43752 255 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 TRAK2O60296 914 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 PCP11498 1178 aaKnown RBP9.52□□□□□ -0.89
SFPQ-202ENST00000460428 PDCP20941 246 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 CYP7A1P22680 504 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 GJB2P29033 226 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 ANTXR2P58335 489 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 PPP4CP60510 307 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 NOL8Q76FK4 1167 aaKnown RBP9.52□□□□□ -0.89
SFPQ-202ENST00000460428 ZNF804AQ7Z570 1209 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 ADGRA1Q86SQ6 560 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 LCORLQ8N3X6 602 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 TMEM87BQ96K49 555 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 CNNM2Q9H8M5 875 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 ARMT1Q9H993 441 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 ANKIB1Q9P2G1 1089 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 GGA1Q9UJY5 639 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 PARP3Q9Y6F1 533 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 FAM205AQ6ZU69 1335 aa9.52□□□□□ -0.89
SFPQ-202ENST00000460428 MAGEB6P1A0A0J9YX57 407 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 ZSCAN22P10073 491 aaPredicted RBP9.51□□□□□ -0.89
SFPQ-202ENST00000460428 PDIA3P30101 505 aaKnown RBP9.51□□□□□ -0.89
SFPQ-202ENST00000460428 LIFRP42702 1097 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 MECOMQ03112 1051 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 SCRN1Q12765 414 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 TRDNQ13061 729 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 GSE1Q14687 1217 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 NAA16Q6N069 864 aaPredicted RBP9.51□□□□□ -0.89
SFPQ-202ENST00000460428 SGMS1Q86VZ5 419 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 CERS3Q8IU89 383 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 TBC1D10CQ8IV04 446 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 NECAB1Q8N987 351 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 TMEM87AQ8NBN3 555 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 TBC1D16Q8TBP0 767 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 STAG1Q8WVM7 1258 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 BRF1Q92994 677 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 FAM163AQ96GL9 167 aaPredicted RBP9.51□□□□□ -0.89
SFPQ-202ENST00000460428 MASTLQ96GX5 879 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 TCEANC2Q96MN5 208 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 LARP6Q9BRS8 491 aaKnown RBP9.51□□□□□ -0.89
SFPQ-202ENST00000460428 NAPBQ9H115 298 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 CD209Q9NNX6 404 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 LMBRD1Q9NUN5 540 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 RAI14Q9P0K7 980 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 ABCF2Q9UG63 623 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 IQSEC3Q9UPP2 1182 aaPredicted RBP9.51□□□□□ -0.89
SFPQ-202ENST00000460428 MTMR6Q9Y217 621 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 SLC4A4Q9Y6R1 1079 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 CCDC88AQ3V6T2 1871 aa9.51□□□□□ -0.89
SFPQ-202ENST00000460428 NID2Q14112 1375 aa9.5□□□□□ -0.89
SFPQ-202ENST00000460428 PPEF1O14829 653 aaPredicted RBP9.5□□□□□ -0.89
SFPQ-202ENST00000460428 PRC1O43663 620 aa9.5□□□□□ -0.89
SFPQ-202ENST00000460428 PRKAB2O43741 272 aa9.5□□□□□ -0.89
SFPQ-202ENST00000460428 MMP10P09238 476 aa9.5□□□□□ -0.89
SFPQ-202ENST00000460428 RCAN1P53805 252 aa9.5□□□□□ -0.89
SFPQ-202ENST00000460428 HAND2P61296 217 aa9.5□□□□□ -0.89
SFPQ-202ENST00000460428 HMGN5P82970 282 aaKnown RBP9.5□□□□□ -0.89
SFPQ-202ENST00000460428 EZH2Q15910 746 aaKnown RBP9.5□□□□□ -0.89
SFPQ-202ENST00000460428 KLHL40Q2TBA0 621 aa9.5□□□□□ -0.89
SFPQ-202ENST00000460428 SBK1Q52WX2 424 aa9.5□□□□□ -0.89
SFPQ-202ENST00000460428 AKNAD1Q5T1N1 836 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms