RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 GEN1Q17RS7 908 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 NSMCE1Q8WV22 266 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 UGGT2Q9NYU1 1516 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 NAA25Q14CX7 972 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 RTL1A6NKG5 1358 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 PLS1Q14651 629 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 CCDC42Q96M95 316 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 MYCBPQ99417 103 aaPredicted RBP9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 PPFIA3O75145 1194 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 EPB41P11171 864 aaKnown RBP9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 RAB11FIP4Q86YS3 637 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 JDP2Q8WYK2 163 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 SEC62Q99442 399 aaKnown RBP9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 SELENOSQ9BQE4 189 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 CNGA4Q8IV77 575 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 CEP120Q8N960 986 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 NUF2Q9BZD4 464 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 GIGYF1O75420 1035 aaPredicted RBP9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 LRCH2Q5VUJ6 765 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 POTEDQ86YR6 584 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 CCDC114Q96M63 670 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 INTS8Q75QN2 995 aaKnown RBP9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 BRAPQ7Z569 592 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 RSPH3Q86UC2 560 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 MPNDQ8N594 471 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 TRMT1Q9NXH9 659 aaKnown RBP9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 KCNG1Q9UIX4 513 aa9.97□□□□□ -0.81
SHROOM4-203ENST00000460112 KDM5DQ9BY66 1539 aa9.96□□□□□ -0.81
SHROOM4-203ENST00000460112 TACC3Q9Y6A5 838 aa9.96□□□□□ -0.81
SHROOM4-203ENST00000460112 ELP1O95163 1332 aa9.96□□□□□ -0.81
SHROOM4-203ENST00000460112 ERCC5P28715 1186 aaPredicted RBP9.96□□□□□ -0.81
SHROOM4-203ENST00000460112 FAM204AQ9H8W3 233 aa9.96□□□□□ -0.81
SHROOM4-203ENST00000460112 ACTN4O43707 911 aaKnown RBP9.96□□□□□ -0.81
SHROOM4-203ENST00000460112 ITIH3Q06033 890 aa9.96□□□□□ -0.81
SHROOM4-203ENST00000460112 CCDC89Q8N998 374 aa9.96□□□□□ -0.81
SHROOM4-203ENST00000460112 HAUS8Q9BT25 410 aa9.96□□□□□ -0.81
SHROOM4-203ENST00000460112 PHF8Q9UPP1 1060 aa9.96□□□□□ -0.81
SHROOM4-203ENST00000460112 AGTPBP1Q9UPW5 1226 aa9.96□□□□□ -0.81
SHROOM4-203ENST00000460112 LUC7L2Q9Y383 392 aaKnown RBP9.96□□□□□ -0.81
SHROOM4-203ENST00000460112 RIOK3O14730 519 aaKnown RBP9.96□□□□□ -0.82
SHROOM4-203ENST00000460112 CETN3O15182 167 aa9.96□□□□□ -0.82
SHROOM4-203ENST00000460112 BIN1O00499 593 aa9.96□□□□□ -0.82
SHROOM4-203ENST00000460112 RSPH14Q9UHP6 348 aa9.96□□□□□ -0.82
SHROOM4-203ENST00000460112 TCHHQ07283 1943 aa9.96□□□□□ -0.82
SHROOM4-203ENST00000460112 TRIM75PA6NK02 468 aa9.96□□□□□ -0.82
SHROOM4-203ENST00000460112 CPLX4Q7Z7G2 160 aa9.96□□□□□ -0.82
SHROOM4-203ENST00000460112 IMPACTQ9P2X3 320 aa9.96□□□□□ -0.82
SHROOM4-203ENST00000460112 ZSCAN22P10073 491 aaPredicted RBP9.96□□□□□ -0.82
SHROOM4-203ENST00000460112 BIRC2Q13490 618 aa9.96□□□□□ -0.82
SHROOM4-203ENST00000460112 CNPY4Q8N129 248 aa9.96□□□□□ -0.82
SHROOM4-203ENST00000460112 SLC4A4Q9Y6R1 1079 aa9.96□□□□□ -0.82
SHROOM4-203ENST00000460112 GUCY1B3Q02153 619 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 NAA16Q6N069 864 aaPredicted RBP9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 TTC41PQ6P2S7 1318 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 CALUO43852 315 aaPredicted RBP9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 NBPF11Q86T75 865 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 ATRIPQ8WXE1 791 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 ALG1Q9BT22 464 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 HAUS3Q68CZ6 603 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 I3L4J1 428 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 MICALL1Q8N3F8 863 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 HVCN1Q96D96 273 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 MAST3O60307 1309 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 AOX1Q06278 1338 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 UBXN1Q04323 297 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 TTC22Q5TAA0 569 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 LGSNQ5TDP6 509 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 PHLDB2Q86SQ0 1253 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 BANK1Q8NDB2 785 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 TBC1D2Q9BYX2 928 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 YWHAEP62258 255 aaKnown RBP9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 MUM1L1Q5H9M0 696 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 CCDC8Q9H0W5 538 aaPredicted RBP9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 WDR70Q9NW82 654 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 MAGEB6P1A0A0J9YX57 407 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 ARHGAP25P42331 645 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 CCDC62Q6P9F0 684 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 OGFRQ9NZT2 677 aa9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 FEZ2Q9UHY8 353 aaPredicted RBP9.95□□□□□ -0.82
SHROOM4-203ENST00000460112 PPIP5K1Q6PFW1 1433 aa9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 EIF3DO15371 548 aaKnown RBP eCLIP9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 CCDC65Q8IXS2 484 aa9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 HACE1Q8IYU2 909 aa9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 MAP3K21Q5TCX8 1036 aa9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 SMC5Q8IY18 1101 aa9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 FAM76AQ8TAV0 307 aa9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 VCX3AQ9NNX9 186 aa9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 KLF18A0A0U1RQI7 1052 aa9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 CLEC11AQ9Y240 323 aa9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 SYT1P21579 422 aa9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 CYP7A1P22680 504 aa9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 GJC1P36383 396 aa9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 IL15P40933 162 aaPredicted RBP9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 TSNAXIP1Q2TAA8 658 aa9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 CADPS2Q86UW7 1296 aa9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 PLCD1P51178 756 aa9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 MCMDC2Q4G0Z9 681 aa9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 UBE3BQ7Z3V4 1068 aa9.94□□□□□ -0.82
SHROOM4-203ENST00000460112 NLRP3Q96P20 1036 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms