RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 CGNL1Q0VF96 1302 aa6.65□□□□□ -1.35
HMGB4-202ENST00000458277 LRPPRCP42704 1394 aaKnown RBP6.65□□□□□ -1.35
HMGB4-202ENST00000458277 RAPGEF2Q9Y4G8 1499 aa6.65□□□□□ -1.35
HMGB4-202ENST00000458277 KIF2AO00139 706 aaPredicted RBP6.64□□□□□ -1.35
HMGB4-202ENST00000458277 CDK2AP1O14519 115 aa6.64□□□□□ -1.35
HMGB4-202ENST00000458277 MBD3O95983 291 aa6.64□□□□□ -1.35
HMGB4-202ENST00000458277 HNRNPH2P55795 449 aaKnown RBP6.64□□□□□ -1.35
HMGB4-202ENST00000458277 RAB3GAP1Q15042 981 aa6.64□□□□□ -1.35
HMGB4-202ENST00000458277 GAS2L3Q86XJ1 694 aa6.64□□□□□ -1.35
HMGB4-202ENST00000458277 GOLGA5Q8TBA6 731 aa6.64□□□□□ -1.35
HMGB4-202ENST00000458277 STAG1Q8WVM7 1258 aa6.64□□□□□ -1.35
HMGB4-202ENST00000458277 PANK3Q9H999 370 aa6.64□□□□□ -1.35
HMGB4-202ENST00000458277 NUB1Q9Y5A7 615 aa6.64□□□□□ -1.35
HMGB4-202ENST00000458277 PLEKHH1Q9ULM0 1364 aa6.64□□□□□ -1.35
HMGB4-202ENST00000458277 NCOA3Q9Y6Q9 1424 aa6.64□□□□□ -1.35
HMGB4-202ENST00000458277 SNAPC4Q5SXM2 1469 aa6.64□□□□□ -1.35
HMGB4-202ENST00000458277 ADAMTS12P58397 1594 aa6.64□□□□□ -1.35
HMGB4-202ENST00000458277 PBRM1Q86U86 1689 aa6.64□□□□□ -1.35
HMGB4-202ENST00000458277 POLR1AO95602 1720 aaPredicted RBP6.64□□□□□ -1.35
HMGB4-202ENST00000458277 A6NJY4 79 aa6.63□□□□□ -1.35
HMGB4-202ENST00000458277 SMTNL1A8MU46 457 aa6.63□□□□□ -1.35
HMGB4-202ENST00000458277 TMCO5BA8MYB1 307 aa6.63□□□□□ -1.35
HMGB4-202ENST00000458277 USP19O94966 1318 aa6.63□□□□□ -1.35
HMGB4-202ENST00000458277 TPM1P09493 284 aa6.63□□□□□ -1.35
HMGB4-202ENST00000458277 AFF1P51825 1210 aaKnown RBP6.63□□□□□ -1.35
HMGB4-202ENST00000458277 CUL7Q14999 1698 aa6.63□□□□□ -1.35
HMGB4-202ENST00000458277 ZRSR2Q15696 482 aaKnown RBP6.63□□□□□ -1.35
HMGB4-202ENST00000458277 RINLQ6ZS11 566 aa6.63□□□□□ -1.35
HMGB4-202ENST00000458277 DHX29Q7Z478 1369 aaKnown RBP6.63□□□□□ -1.35
HMGB4-202ENST00000458277 MSL3Q8N5Y2 521 aaKnown RBP6.63□□□□□ -1.35
HMGB4-202ENST00000458277 KIF18AQ8NI77 898 aa6.63□□□□□ -1.35
HMGB4-202ENST00000458277 PNISRQ8TF01 805 aaKnown RBP6.63□□□□□ -1.35
HMGB4-202ENST00000458277 ZNF526Q8TF50 670 aaPredicted RBP6.63□□□□□ -1.35
HMGB4-202ENST00000458277 CTTNBP2Q8WZ74 1663 aa6.63□□□□□ -1.35
HMGB4-202ENST00000458277 SGSM3Q96HU1 749 aa6.63□□□□□ -1.35
HMGB4-202ENST00000458277 MIA2Q96PC5 1412 aa6.63□□□□□ -1.35
HMGB4-202ENST00000458277 UTP14AQ9BVJ6 771 aaKnown RBP6.63□□□□□ -1.35
HMGB4-202ENST00000458277 ANKRD30AQ9BXX3 1397 aa6.63□□□□□ -1.35
HMGB4-202ENST00000458277 UBE2OQ9C0C9 1292 aaKnown RBP6.63□□□□□ -1.35
HMGB4-202ENST00000458277 FAM53CQ9NYF3 392 aa6.63□□□□□ -1.35
HMGB4-202ENST00000458277 CHD1O14646 1710 aa6.62□□□□□ -1.35
HMGB4-202ENST00000458277 SYNJ2O15056 1496 aa6.62□□□□□ -1.35
HMGB4-202ENST00000458277 MYO1CO00159 1063 aa6.62□□□□□ -1.35
HMGB4-202ENST00000458277 TUBB4AP04350 444 aa6.62□□□□□ -1.35
HMGB4-202ENST00000458277 TRAF1Q13077 416 aa6.62□□□□□ -1.35
HMGB4-202ENST00000458277 CCDC96Q2M329 555 aa6.62□□□□□ -1.35
HMGB4-202ENST00000458277 TTLL5Q6EMB2 1281 aa6.62□□□□□ -1.35
HMGB4-202ENST00000458277 LRSAM1Q6UWE0 723 aa6.62□□□□□ -1.35
HMGB4-202ENST00000458277 IQUBQ8NA54 791 aa6.62□□□□□ -1.35
HMGB4-202ENST00000458277 PMFBP1Q8TBY8 1022 aa6.62□□□□□ -1.35
HMGB4-202ENST00000458277 TSPAN18Q96SJ8 248 aa6.62□□□□□ -1.35
HMGB4-202ENST00000458277 CRBNQ96SW2 442 aa6.62□□□□□ -1.35
HMGB4-202ENST00000458277 PSD3Q9NYI0 1048 aa6.62□□□□□ -1.35
HMGB4-202ENST00000458277 CLASP1Q7Z460 1538 aa6.61□□□□□ -1.35
HMGB4-202ENST00000458277 CCDC18Q5T9S5 1454 aa6.61□□□□□ -1.35
HMGB4-202ENST00000458277 ANKRD33BA6NCL7 494 aa6.61□□□□□ -1.35
HMGB4-202ENST00000458277 COQ9O75208 318 aa6.61□□□□□ -1.35
HMGB4-202ENST00000458277 DDIT3P35638 169 aa6.61□□□□□ -1.35
HMGB4-202ENST00000458277 PDCD2Q16342 344 aaPredicted RBP6.61□□□□□ -1.35
HMGB4-202ENST00000458277 HSP90B2PQ58FF3 399 aa6.61□□□□□ -1.35
HMGB4-202ENST00000458277 CCDC30Q5VVM6 783 aa6.61□□□□□ -1.35
HMGB4-202ENST00000458277 MMS22LQ6ZRQ5 1243 aa6.61□□□□□ -1.35
HMGB4-202ENST00000458277 TNPO1Q92973 898 aaKnown RBP6.61□□□□□ -1.35
HMGB4-202ENST00000458277 BHMTQ93088 406 aa6.61□□□□□ -1.35
HMGB4-202ENST00000458277 KIF1BPQ96EK5 621 aa6.61□□□□□ -1.35
HMGB4-202ENST00000458277 GPBP1L1Q9HC44 474 aaPredicted RBP6.61□□□□□ -1.35
HMGB4-202ENST00000458277 ARGLU1Q9NWB6 273 aaPredicted RBP6.61□□□□□ -1.35
HMGB4-202ENST00000458277 SLC6A14Q9UN76 642 aa6.61□□□□□ -1.35
HMGB4-202ENST00000458277 MTUS2Q5JR59 1369 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 ATAD2Q6PL18 1390 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 CCDC189A1A4V9 331 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 ZBTB7CA1YPR0 619 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 ANKRD18BA2A2Z9 1011 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 SOCS7O14512 581 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 SGSM2O43147 1006 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 GPR37L1O60883 481 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 CPP00450 1065 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 MTFR1Q15390 333 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 AP1ARQ63HQ0 302 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 PSAPL1Q6NUJ1 521 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 SLC51AQ86UW1 340 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 PHTF2Q8N3S3 785 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 DDX11Q96FC9 970 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 SH3GL3Q99963 347 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 KDM4CQ9H3R0 1056 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 A1CFQ9NQ94 594 aaKnown RBP6.6□□□□□ -1.35
HMGB4-202ENST00000458277 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.6□□□□□ -1.35
HMGB4-202ENST00000458277 MKRN1Q9UHC7 482 aaKnown RBP6.6□□□□□ -1.35
HMGB4-202ENST00000458277 USP25Q9UHP3 1055 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 GRIN2AQ12879 1464 aa6.6□□□□□ -1.35
HMGB4-202ENST00000458277 NUP160Q12769 1436 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 UACAQ9BZF9 1416 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 KIAA1324LA8MWY0 1029 aaPredicted RBP6.59□□□□□ -1.35
HMGB4-202ENST00000458277 C21orf2O43822 256 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 ADAMTS4O75173 837 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 SMC2O95347 1197 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 TGFB1P01137 390 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 RDXP35241 583 aaKnown RBP6.59□□□□□ -1.35
HMGB4-202ENST00000458277 RWDD2BP57060 319 aa6.59□□□□□ -1.35
HMGB4-202ENST00000458277 ICA1Q05084 483 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms