RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 CCDC112Q8NEF3 446 aa11.75□□□□□ -0.53
CHCHD4P3-201ENST00000455954 MAP4K1Q92918 833 aa11.75□□□□□ -0.53
CHCHD4P3-201ENST00000455954 MRFAP1L1Q96HT8 127 aa11.75□□□□□ -0.53
CHCHD4P3-201ENST00000455954 CRAMP1Q96RY5 1269 aa11.75□□□□□ -0.53
CHCHD4P3-201ENST00000455954 PRDM10Q9NQV6 1147 aa11.75□□□□□ -0.53
CHCHD4P3-201ENST00000455954 MORC2Q9Y6X9 1032 aaPredicted RBP11.75□□□□□ -0.53
CHCHD4P3-201ENST00000455954 VPS37CA5D8V6 355 aaPredicted RBP11.74□□□□□ -0.53
CHCHD4P3-201ENST00000455954 GOLGA6L4A6NEF3 574 aa11.74□□□□□ -0.53
CHCHD4P3-201ENST00000455954 KRT32Q14532 448 aa11.74□□□□□ -0.53
CHCHD4P3-201ENST00000455954 BEND3Q5T5X7 828 aa11.74□□□□□ -0.53
CHCHD4P3-201ENST00000455954 CREB3L3Q68CJ9 461 aa11.74□□□□□ -0.53
CHCHD4P3-201ENST00000455954 ATL3Q6DD88 541 aa11.74□□□□□ -0.53
CHCHD4P3-201ENST00000455954 CC2D2BQ6DHV5 1058 aa11.74□□□□□ -0.53
CHCHD4P3-201ENST00000455954 ZSCAN25Q6NSZ9 544 aa11.74□□□□□ -0.53
CHCHD4P3-201ENST00000455954 C3orf67Q6ZVT6 689 aa11.74□□□□□ -0.53
CHCHD4P3-201ENST00000455954 TICAM2Q86XR7 235 aa11.74□□□□□ -0.53
CHCHD4P3-201ENST00000455954 ZNF397Q8NF99 534 aaPredicted RBP11.74□□□□□ -0.53
CHCHD4P3-201ENST00000455954 CHMP4CQ96CF2 233 aa11.74□□□□□ -0.53
CHCHD4P3-201ENST00000455954 ZSCAN16Q9H4T2 348 aaPredicted RBP11.74□□□□□ -0.53
CHCHD4P3-201ENST00000455954 CTNNA3Q9UI47 895 aa11.74□□□□□ -0.53
CHCHD4P3-201ENST00000455954 DDX41Q9UJV9 622 aaKnown RBP11.74□□□□□ -0.53
CHCHD4P3-201ENST00000455954 MED23Q9ULK4 1368 aa11.74□□□□□ -0.53
CHCHD4P3-201ENST00000455954 FER1L6Q2WGJ9 1857 aa11.74□□□□□ -0.53
CHCHD4P3-201ENST00000455954 KIF3CO14782 793 aa11.73□□□□□ -0.53
CHCHD4P3-201ENST00000455954 TNNT1P13805 278 aa11.73□□□□□ -0.53
CHCHD4P3-201ENST00000455954 KCNJ6P48051 423 aa11.73□□□□□ -0.53
CHCHD4P3-201ENST00000455954 CACNA1SQ13698 1873 aa11.73□□□□□ -0.53
CHCHD4P3-201ENST00000455954 ME3Q16798 604 aa11.73□□□□□ -0.53
CHCHD4P3-201ENST00000455954 ANO6Q4KMQ2 910 aa11.73□□□□□ -0.53
CHCHD4P3-201ENST00000455954 GRIPAP1Q4V328 841 aa11.73□□□□□ -0.53
CHCHD4P3-201ENST00000455954 CWC27Q6UX04 472 aaKnown RBP11.73□□□□□ -0.53
CHCHD4P3-201ENST00000455954 SYNE4Q8N205 404 aa11.73□□□□□ -0.53
CHCHD4P3-201ENST00000455954 SPC24Q8NBT2 197 aa11.73□□□□□ -0.53
CHCHD4P3-201ENST00000455954 DNAAF4Q8WXU2 420 aa11.73□□□□□ -0.53
CHCHD4P3-201ENST00000455954 SPATA32Q96LK8 384 aa11.73□□□□□ -0.53
CHCHD4P3-201ENST00000455954 RBM8AQ9Y5S9 174 aaKnown RBP11.73□□□□□ -0.53
CHCHD4P3-201ENST00000455954 LAMA4Q16363 1823 aa11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 GLTPD2A6NH11 291 aa11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 LIG1P18858 919 aa11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 RPS6KB1P23443 525 aa11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 PLCB2Q00722 1185 aa11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 FKBP4Q02790 459 aaKnown RBP eCLIP11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 BLOC1S2Q6QNY1 142 aa11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 OLFM4Q6UX06 510 aa11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 KSR2Q6VAB6 950 aa11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 CCDC186Q7Z3E2 898 aa11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 LEO1Q8WVC0 666 aaPredicted RBP11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 TSC1Q92574 1164 aa11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 FAM89AQ96GI7 184 aa11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 MYD88Q99836 296 aa11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 METTL22Q9BUU2 404 aaPredicted RBP11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 TRIM5Q9C035 493 aa11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 TMX4Q9H1E5 349 aaPredicted RBP11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 NMRK2Q9NPI5 230 aa11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 ZHX1Q9UKY1 873 aaPredicted RBP11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 CFAP45Q9UL16 551 aa11.72□□□□□ -0.53
CHCHD4P3-201ENST00000455954 UTYO14607 1347 aa11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 GOLGB1Q14789 3259 aaKnown RBP11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 PI4KAP2A4QPH2 592 aa11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 PPEF1O14829 653 aaPredicted RBP11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 SLC27A2O14975 620 aa11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 BBOX1O75936 387 aa11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 IFIT2P09913 472 aaKnown RBP11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 U2AF2P26368 475 aaKnown RBP eCLIP11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 GSDMDP57764 484 aa11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 PTH1RQ03431 593 aa11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 STX1AQ16623 288 aa11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 DPY19L2Q6NUT2 758 aa11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 CDC37L1Q7L3B6 337 aa11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 DRC7Q8IY82 874 aa11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 PI4KAP1Q8N8J0 262 aa11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 ZBTB38Q8NAP3 1195 aaPredicted RBP11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 CCDC191Q8NCU4 936 aa11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 ERO1AQ96HE7 468 aa11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 LLPHQ9BRT6 129 aaKnown RBP11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 DACT1Q9NYF0 836 aa11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 FAM53CQ9NYF3 392 aa11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 TPCN1Q9ULQ1 816 aa11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 MAP3K2Q9Y2U5 619 aa11.71□□□□□ -0.53
CHCHD4P3-201ENST00000455954 CCDC66A2RUB6 948 aa11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 GOLGA6L19H0YKK7 550 aa11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 TOMM70O94826 608 aa11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 HSP90B1P14625 803 aaKnown RBP11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 ZNF165P49910 485 aa11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 RESTQ13127 1097 aa11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 OS9Q13438 667 aaPredicted RBP11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 SF3B3Q15393 1217 aaKnown RBP11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 TPD52L1Q16890 204 aaPredicted RBP11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 ADCK5Q3MIX3 580 aa11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 CEP135Q66GS9 1140 aa11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 NYAP1Q6ZVC0 841 aa11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 DDX46Q7L014 1031 aaKnown RBP11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 LUZP1Q86V48 1076 aa11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 KRT222Q8N1A0 295 aa11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 MPNDQ8N594 471 aa11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 PSMD1Q99460 953 aa11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 RRAGCQ9HB90 399 aa11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 ZNF277Q9NRM2 450 aaPredicted RBP11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 CWC25Q9NXE8 425 aaPredicted RBP11.7□□□□□ -0.54
CHCHD4P3-201ENST00000455954 IMPACTQ9P2X3 320 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms