RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 R3HCC1Q9Y3T6 440 aaKnown RBP12.43□□□□□ -0.42
GTF3C2-206ENST00000454704 DICER1Q9UPY3 1922 aaKnown RBP12.43□□□□□ -0.42
GTF3C2-206ENST00000454704 WDR19Q8NEZ3 1342 aa12.42□□□□□ -0.42
GTF3C2-206ENST00000454704 C21orf2O43822 256 aa12.42□□□□□ -0.42
GTF3C2-206ENST00000454704 PDE6BP35913 854 aa12.42□□□□□ -0.42
GTF3C2-206ENST00000454704 FOXO4P98177 505 aa12.42□□□□□ -0.42
GTF3C2-206ENST00000454704 RESTQ13127 1097 aa12.42□□□□□ -0.42
GTF3C2-206ENST00000454704 FOXD4L6Q3SYB3 417 aaPredicted RBP12.42□□□□□ -0.42
GTF3C2-206ENST00000454704 ZMYM1Q5SVZ6 1142 aa12.42□□□□□ -0.42
GTF3C2-206ENST00000454704 FOXD4L3Q6VB84 417 aaPredicted RBP12.42□□□□□ -0.42
GTF3C2-206ENST00000454704 LEO1Q8WVC0 666 aaPredicted RBP12.42□□□□□ -0.42
GTF3C2-206ENST00000454704 ZNF274Q96GC6 653 aaPredicted RBP12.42□□□□□ -0.42
GTF3C2-206ENST00000454704 DBNDD2Q9BQY9 259 aa12.42□□□□□ -0.42
GTF3C2-206ENST00000454704 BRIP1Q9BX63 1249 aa12.42□□□□□ -0.42
GTF3C2-206ENST00000454704 TEX13AQ9BXU3 409 aaPredicted RBP12.42□□□□□ -0.42
GTF3C2-206ENST00000454704 TNMDQ9H2S6 317 aa12.42□□□□□ -0.42
GTF3C2-206ENST00000454704 PAG1Q9NWQ8 432 aa12.42□□□□□ -0.42
GTF3C2-206ENST00000454704 CTNNA3Q9UI47 895 aa12.42□□□□□ -0.42
GTF3C2-206ENST00000454704 AKAP2Q9Y2D5 859 aa12.42□□□□□ -0.42
GTF3C2-206ENST00000454704 H3BQV1 296 aa12.41□□□□□ -0.42
GTF3C2-206ENST00000454704 EYA2O00167 538 aa12.41□□□□□ -0.42
GTF3C2-206ENST00000454704 A1BGP04217 495 aa12.41□□□□□ -0.42
GTF3C2-206ENST00000454704 CYP21A2P08686 494 aa12.41□□□□□ -0.42
GTF3C2-206ENST00000454704 IL6STP40189 918 aaPredicted RBP12.41□□□□□ -0.42
GTF3C2-206ENST00000454704 TYRO3Q06418 890 aa12.41□□□□□ -0.42
GTF3C2-206ENST00000454704 TRIM28Q13263 835 aaKnown RBP12.41□□□□□ -0.42
GTF3C2-206ENST00000454704 LMBR1LQ6UX01 489 aa12.41□□□□□ -0.42
GTF3C2-206ENST00000454704 Q6ZUG5 572 aa12.41□□□□□ -0.42
GTF3C2-206ENST00000454704 CNBD1Q8NA66 436 aa12.41□□□□□ -0.42
GTF3C2-206ENST00000454704 ZNF396Q96N95 335 aaPredicted RBP12.41□□□□□ -0.42
GTF3C2-206ENST00000454704 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.41□□□□□ -0.42
GTF3C2-206ENST00000454704 SLX4Q8IY92 1834 aa12.41□□□□□ -0.42
GTF3C2-206ENST00000454704 ARAP2Q8WZ64 1704 aa12.41□□□□□ -0.42
GTF3C2-206ENST00000454704 UQCRHLA0A096LP55 91 aa12.4□□□□□ -0.42
GTF3C2-206ENST00000454704 POTECB2RU33 542 aa12.4□□□□□ -0.42
GTF3C2-206ENST00000454704 NPHP1O15259 732 aa12.4□□□□□ -0.42
GTF3C2-206ENST00000454704 CAMTA2O94983 1202 aa12.4□□□□□ -0.42
GTF3C2-206ENST00000454704 UQCRHP07919 91 aa12.4□□□□□ -0.42
GTF3C2-206ENST00000454704 HSP90B1P14625 803 aaKnown RBP12.4□□□□□ -0.42
GTF3C2-206ENST00000454704 CDC25BP30305 580 aa12.4□□□□□ -0.42
GTF3C2-206ENST00000454704 GTF2F1P35269 517 aaKnown RBP eCLIP12.4□□□□□ -0.42
GTF3C2-206ENST00000454704 EVCP57679 992 aa12.4□□□□□ -0.42
GTF3C2-206ENST00000454704 DHX8Q14562 1220 aaKnown RBP12.4□□□□□ -0.42
GTF3C2-206ENST00000454704 NOLC1Q14978 699 aaKnown RBP eCLIP12.4□□□□□ -0.42
GTF3C2-206ENST00000454704 ERFEQ4G0M1 354 aa12.4□□□□□ -0.42
GTF3C2-206ENST00000454704 GIMAP6Q6P9H5 292 aa12.4□□□□□ -0.42
GTF3C2-206ENST00000454704 TDRD7Q8NHU6 1098 aaKnown RBP12.4□□□□□ -0.42
GTF3C2-206ENST00000454704 PLA2G12BQ9BX93 195 aa12.4□□□□□ -0.42
GTF3C2-206ENST00000454704 PIP4K2AP48426 406 aaPredicted RBP12.39□□□□□ -0.43
GTF3C2-206ENST00000454704 FGD1P98174 961 aa12.39□□□□□ -0.43
GTF3C2-206ENST00000454704 EXOSC10Q01780 885 aaKnown RBP12.39□□□□□ -0.43
GTF3C2-206ENST00000454704 ATG9AQ7Z3C6 839 aa12.39□□□□□ -0.43
GTF3C2-206ENST00000454704 MYRIPQ8NFW9 859 aa12.39□□□□□ -0.43
GTF3C2-206ENST00000454704 KLHDC4Q8TBB5 520 aa12.39□□□□□ -0.43
GTF3C2-206ENST00000454704 BRF1Q92994 677 aa12.39□□□□□ -0.43
GTF3C2-206ENST00000454704 SETDB2Q96T68 719 aa12.39□□□□□ -0.43
GTF3C2-206ENST00000454704 DNAJC2Q99543 621 aaKnown RBP12.39□□□□□ -0.43
GTF3C2-206ENST00000454704 LARP6Q9BRS8 491 aaKnown RBP12.39□□□□□ -0.43
GTF3C2-206ENST00000454704 TAOK3Q9H2K8 898 aa12.39□□□□□ -0.43
GTF3C2-206ENST00000454704 RNF113AO15541 343 aaKnown RBP12.38□□□□□ -0.43
GTF3C2-206ENST00000454704 DHX16O60231 1041 aaKnown RBP12.38□□□□□ -0.43
GTF3C2-206ENST00000454704 CAPN15O75808 1086 aa12.38□□□□□ -0.43
GTF3C2-206ENST00000454704 IFIT1P09914 478 aaKnown RBP12.38□□□□□ -0.43
GTF3C2-206ENST00000454704 ST5P78524 1137 aa12.38□□□□□ -0.43
GTF3C2-206ENST00000454704 CHAF1AQ13111 956 aaPredicted RBP12.38□□□□□ -0.43
GTF3C2-206ENST00000454704 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
GTF3C2-206ENST00000454704 ISCA1Q9BUE6 129 aa12.38□□□□□ -0.43
GTF3C2-206ENST00000454704 RCOR1Q9UKL0 485 aa12.38□□□□□ -0.43
GTF3C2-206ENST00000454704 MRVI1Q9Y6F6 885 aa12.38□□□□□ -0.43
GTF3C2-206ENST00000454704 NEMFO60524 1076 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 CCDC158Q5M9N0 1113 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 STYK1Q6J9G0 422 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 SARM1Q6SZW1 724 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 DZIP3Q86Y13 1208 aaKnown RBP12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 TNS4Q8IZW8 715 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 NSUN7Q8NE18 718 aaKnown RBP12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 BICD2Q8TD16 824 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 CNKSR1Q969H4 720 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 DACT1Q9NYF0 836 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 CDHR2Q9BYE9 1310 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 LTBP3Q9NS15 1303 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 SALL1Q9NSC2 1324 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 NBPF26B4DH59 902 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 HSPA1AP0DMV8 641 aaKnown RBP12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 HSPA1BP0DMV9 641 aaKnown RBP12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 SRGNP10124 158 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 LIG1P18858 919 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 SCRN1Q12765 414 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 HSP90AB3PQ58FF7 597 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 DNTTIP2Q5QJE6 756 aaKnown RBP12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 ZSCAN25Q6NSZ9 544 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 NBPF10Q6P3W6 841 aaKnown RBP12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 DDX46Q7L014 1031 aaKnown RBP12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 NBPF15Q8N660 670 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 KIAA1524Q8TCG1 905 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 ZNF512BQ96KM6 892 aaPredicted RBP12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 CEP126Q9P2H0 1117 aa12.37□□□□□ -0.43
GTF3C2-206ENST00000454704 ATP5J2-PTCD1G3V325 749 aa12.36□□□□□ -0.43
GTF3C2-206ENST00000454704 PCCAP05165 728 aaPredicted RBP12.36□□□□□ -0.43
GTF3C2-206ENST00000454704 POTEIP0CG38 1075 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms