RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 IRS4O14654 1257 aaPredicted RBP14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 NEMFO60524 1076 aa14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 RALYLQ86SE5 291 aaKnown RBP14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 UBE2Q2Q8WVN8 375 aa14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 TMEM87BQ96K49 555 aa14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 MTA3Q9BTC8 594 aa14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 NBPF3Q9H094 633 aa14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 DNAJC25Q9H1X3 360 aa14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 PYCARDQ9ULZ3 195 aa14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 ZNF335Q9H4Z2 1342 aaPredicted RBP14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 SLIT2O94813 1529 aa14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 KINO60870 393 aaKnown RBP14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 TPRNQ4KMQ1 711 aa14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 SGMS1Q86VZ5 419 aa14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 LPIN2Q92539 896 aa14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 C8orf76Q96K31 380 aa14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 ORC3Q9UBD5 711 aaPredicted RBP14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 PCDHA7Q9UN72 937 aa14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 ANGEL1Q9UNK9 670 aaKnown RBP14.61□□□□□ -0.07
ECHDC1-209ENST00000454591 FAM237AA0A1B0GTK4 181 aa14.6□□□□□ -0.07
ECHDC1-209ENST00000454591 GOLGA8BA8MQT2 603 aa14.6□□□□□ -0.07
ECHDC1-209ENST00000454591 SH2B2O14492 632 aaPredicted RBP14.6□□□□□ -0.07
ECHDC1-209ENST00000454591 CDKL5O76039 1030 aa14.6□□□□□ -0.07
ECHDC1-209ENST00000454591 PUM3Q15397 648 aaKnown RBP14.6□□□□□ -0.07
ECHDC1-209ENST00000454591 MYSM1Q5VVJ2 828 aa14.6□□□□□ -0.07
ECHDC1-209ENST00000454591 FSIP1Q8NA03 581 aa14.6□□□□□ -0.07
ECHDC1-209ENST00000454591 CDCA7Q9BWT1 371 aaPredicted RBP14.6□□□□□ -0.07
ECHDC1-209ENST00000454591 NRAPQ86VF7 1730 aa14.6□□□□□ -0.07
ECHDC1-209ENST00000454591 STK36Q9NRP7 1315 aa14.59□□□□□ -0.07
ECHDC1-209ENST00000454591 KDM4FA0A1W2PPD8 638 aa14.59□□□□□ -0.07
ECHDC1-209ENST00000454591 PDE6AP16499 860 aa14.59□□□□□ -0.07
ECHDC1-209ENST00000454591 KIF23Q02241 960 aaPredicted RBP14.59□□□□□ -0.07
ECHDC1-209ENST00000454591 TRDNQ13061 729 aa14.59□□□□□ -0.07
ECHDC1-209ENST00000454591 CCDC102BQ68D86 513 aa14.59□□□□□ -0.07
ECHDC1-209ENST00000454591 TIGD1Q96MW7 591 aa14.59□□□□□ -0.07
ECHDC1-209ENST00000454591 TRIM5Q9C035 493 aa14.59□□□□□ -0.07
ECHDC1-209ENST00000454591 PIH1D3Q9NQM4 214 aaKnown RBP14.59□□□□□ -0.07
ECHDC1-209ENST00000454591 CNNM1Q9NRU3 951 aa14.59□□□□□ -0.07
ECHDC1-209ENST00000454591 KCND1Q9NSA2 647 aa14.59□□□□□ -0.07
ECHDC1-209ENST00000454591 ZBTB1Q9Y2K1 713 aa14.59□□□□□ -0.07
ECHDC1-209ENST00000454591 NEDD4P46934 1319 aa14.59□□□□□ -0.07
ECHDC1-209ENST00000454591 LIFRP42702 1097 aa14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 ME1P48163 572 aa14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 RCAN1P53805 252 aa14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 EIF5P55010 431 aaKnown RBP14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 PLCB2Q00722 1185 aa14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 SLC9C2Q5TAH2 1124 aa14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 PI16Q6UXB8 463 aa14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 C11orf57Q6ZUT1 292 aaPredicted RBP14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 CHST3Q7LGC8 479 aa14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 CCDC186Q7Z3E2 898 aa14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 CEP57L1Q8IYX8 460 aa14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 STRBPQ96SI9 672 aaKnown RBP14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 FTOQ9C0B1 505 aaKnown RBP eCLIP14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 GPHNQ9NQX3 736 aaPredicted RBP14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 BTG4Q9NY30 223 aa14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 TRMT112Q9UI30 125 aaKnown RBP14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 TBC1D2BQ9UPU7 963 aa14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 UBN2Q6ZU65 1347 aa14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 A0A1B0GUL6 1792 aa14.58□□□□□ -0.08
ECHDC1-209ENST00000454591 GOLGA6L19H0YKK7 550 aa14.57□□□□□ -0.08
ECHDC1-209ENST00000454591 SPTLC2O15270 562 aa14.57□□□□□ -0.08
ECHDC1-209ENST00000454591 PTGS1P23219 599 aa14.57□□□□□ -0.08
ECHDC1-209ENST00000454591 CMA1P23946 247 aa14.57□□□□□ -0.08
ECHDC1-209ENST00000454591 HAND2P61296 217 aa14.57□□□□□ -0.08
ECHDC1-209ENST00000454591 RBM6P78332 1123 aaKnown RBP14.57□□□□□ -0.08
ECHDC1-209ENST00000454591 TBC1D10CQ8IV04 446 aa14.57□□□□□ -0.08
ECHDC1-209ENST00000454591 DHX40Q8IX18 779 aaKnown RBP14.57□□□□□ -0.08
ECHDC1-209ENST00000454591 SYNE4Q8N205 404 aa14.57□□□□□ -0.08
ECHDC1-209ENST00000454591 NAT10Q9H0A0 1025 aaKnown RBP14.57□□□□□ -0.08
ECHDC1-209ENST00000454591 ZNF532Q9HCE3 1301 aa14.57□□□□□ -0.08
ECHDC1-209ENST00000454591 PATL2C9JE40 543 aaKnown RBP14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 CPLX1O14810 134 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 PPP6R2O75170 966 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 PHKA1P46020 1223 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 DHX8Q14562 1220 aaKnown RBP14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 SLC39A14Q15043 492 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 STK38Q15208 465 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 GLIPR1L2Q4G1C9 344 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 DNTTIP2Q5QJE6 756 aaKnown RBP14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 AXDND1Q5T1B0 1012 aaPredicted RBP14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 ANO1Q5XXA6 986 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 CPLX2Q6PUV4 134 aaKnown RBP14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 APOA5Q6Q788 366 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 DZIP3Q86Y13 1208 aaKnown RBP14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 ELOA2Q8IYF1 753 aaPredicted RBP14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 SPC24Q8NBT2 197 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 IGDCC4Q8TDY8 1250 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 CLIP2Q9UDT6 1046 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 PNPLA7Q6ZV29 1317 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 EXOC5O00471 708 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 RGL2O15211 777 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 SLC5A1P13866 664 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 GPTP24298 496 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 CEBPZQ03701 1054 aaKnown RBP14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 NTRK3Q16288 839 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 PARP10Q53GL7 1025 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 CYB5R4Q7L1T6 521 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 CNNM2Q9H8M5 875 aa14.56□□□□□ -0.08
ECHDC1-209ENST00000454591 KIAA1468Q9P260 1216 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms