RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 LDHAL6AQ6ZMR3 332 aa7.61□□□□□ -1.19
HLA-DPA3-207ENST00000454398 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.61□□□□□ -1.19
HLA-DPA3-207ENST00000454398 C15orf52Q6ZUT6 534 aaKnown RBP7.61□□□□□ -1.19
HLA-DPA3-207ENST00000454398 MTMR14Q8NCE2 650 aa7.61□□□□□ -1.19
HLA-DPA3-207ENST00000454398 SH3TC2Q8TF17 1288 aa7.61□□□□□ -1.19
HLA-DPA3-207ENST00000454398 MS4A4AQ96JQ5 239 aa7.61□□□□□ -1.19
HLA-DPA3-207ENST00000454398 ZNF70Q9UC06 446 aaPredicted RBP7.61□□□□□ -1.19
HLA-DPA3-207ENST00000454398 PPP2R3BQ9Y5P8 575 aa7.61□□□□□ -1.19
HLA-DPA3-207ENST00000454398 IL16Q14005 1332 aa7.6□□□□□ -1.19
HLA-DPA3-207ENST00000454398 NBPF7P0C2Y1 421 aaPredicted RBP7.6□□□□□ -1.19
HLA-DPA3-207ENST00000454398 SLURP2P0DP57 97 aa7.6□□□□□ -1.19
HLA-DPA3-207ENST00000454398 CRKP46108 304 aa7.6□□□□□ -1.19
HLA-DPA3-207ENST00000454398 TAF1CQ15572 869 aaPredicted RBP7.6□□□□□ -1.19
HLA-DPA3-207ENST00000454398 CCDC27Q2M243 656 aa7.6□□□□□ -1.19
HLA-DPA3-207ENST00000454398 LRRC24Q50LG9 513 aa7.6□□□□□ -1.19
HLA-DPA3-207ENST00000454398 DZIP1LQ8IYY4 767 aaKnown RBP7.6□□□□□ -1.19
HLA-DPA3-207ENST00000454398 BICC1Q9H694 974 aaKnown RBP7.6□□□□□ -1.19
HLA-DPA3-207ENST00000454398 EFCC1Q9HA90 598 aa7.6□□□□□ -1.19
HLA-DPA3-207ENST00000454398 PTPN22Q9Y2R2 807 aa7.6□□□□□ -1.19
HLA-DPA3-207ENST00000454398 SNCAIPQ9Y6H5 919 aa7.6□□□□□ -1.19
HLA-DPA3-207ENST00000454398 DOCK2Q92608 1830 aa7.59□□□□□ -1.19
HLA-DPA3-207ENST00000454398 FAM205AQ6ZU69 1335 aa7.59□□□□□ -1.19
HLA-DPA3-207ENST00000454398 TESPA1A2RU30 521 aaPredicted RBP7.59□□□□□ -1.19
HLA-DPA3-207ENST00000454398 ALDH1A1P00352 501 aa7.59□□□□□ -1.19
HLA-DPA3-207ENST00000454398 SP3Q02447 781 aa7.59□□□□□ -1.19
HLA-DPA3-207ENST00000454398 SUPT20HL1Q3ZLR7 823 aa7.59□□□□□ -1.19
HLA-DPA3-207ENST00000454398 HABP4Q5JVS0 413 aaKnown RBP7.59□□□□□ -1.19
HLA-DPA3-207ENST00000454398 ANKRD13AQ8IZ07 590 aa7.59□□□□□ -1.19
HLA-DPA3-207ENST00000454398 ANKRD44Q8N8A2 993 aa7.59□□□□□ -1.19
HLA-DPA3-207ENST00000454398 TDRD7Q8NHU6 1098 aaKnown RBP7.59□□□□□ -1.19
HLA-DPA3-207ENST00000454398 ZKSCAN4Q969J2 545 aaPredicted RBP7.59□□□□□ -1.19
HLA-DPA3-207ENST00000454398 ARMC5Q96C12 935 aa7.59□□□□□ -1.19
HLA-DPA3-207ENST00000454398 ERO1AQ96HE7 468 aa7.59□□□□□ -1.19
HLA-DPA3-207ENST00000454398 ZNF333Q96JL9 665 aa7.59□□□□□ -1.19
HLA-DPA3-207ENST00000454398 FAM84BQ96KN1 310 aaPredicted RBP7.59□□□□□ -1.19
HLA-DPA3-207ENST00000454398 WRNIP1Q96S55 665 aa7.59□□□□□ -1.19
HLA-DPA3-207ENST00000454398 C9orf78Q9NZ63 289 aaPredicted RBP7.59□□□□□ -1.19
HLA-DPA3-207ENST00000454398 AK9Q5TCS8 1911 aa7.58□□□□□ -1.2
HLA-DPA3-207ENST00000454398 HIBADHP31937 336 aaKnown RBP7.58□□□□□ -1.2
HLA-DPA3-207ENST00000454398 BCAMP50895 628 aa7.58□□□□□ -1.2
HLA-DPA3-207ENST00000454398 SLC9C1Q4G0N8 1177 aa7.58□□□□□ -1.2
HLA-DPA3-207ENST00000454398 METTL24Q5JXM2 366 aa7.58□□□□□ -1.2
HLA-DPA3-207ENST00000454398 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.58□□□□□ -1.2
HLA-DPA3-207ENST00000454398 SHISA4Q96DD7 197 aa7.58□□□□□ -1.2
HLA-DPA3-207ENST00000454398 SERPINA10Q9UK55 444 aa7.58□□□□□ -1.2
HLA-DPA3-207ENST00000454398 BTBD19C9JJ37 291 aa7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 IRF6O14896 467 aa7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 FRAT2O75474 233 aaPredicted RBP7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 INPP5BP32019 993 aa7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 FXR1P51114 621 aaKnown RBP eCLIP7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 FKBP1AP62942 108 aaKnown RBP7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 TCP10Q12799 353 aa7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 MOGSQ13724 837 aa7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 TNFAIP1Q13829 316 aa7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 DIXDC1Q155Q3 683 aa7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 SLC4A8Q2Y0W8 1093 aa7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 MIGA2Q7L4E1 593 aa7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 VPS37DQ86XT2 251 aa7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 VGLL2Q8N8G2 317 aa7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 CHMP4AQ9BY43 222 aa7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 SRCIN1Q9C0H9 1055 aa7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 CPA4Q9UI42 421 aa7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 RIPOR2Q9Y4F9 1068 aa7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 CSADQ9Y600 493 aa7.57□□□□□ -1.2
HLA-DPA3-207ENST00000454398 CUL9Q8IWT3 2517 aa7.56□□□□□ -1.2
HLA-DPA3-207ENST00000454398 ADGRA2Q96PE1 1338 aa7.56□□□□□ -1.2
HLA-DPA3-207ENST00000454398 SPDYE5A6NIY4 337 aa7.56□□□□□ -1.2
HLA-DPA3-207ENST00000454398 H0YGN5 161 aa7.56□□□□□ -1.2
HLA-DPA3-207ENST00000454398 NFIAQ12857 509 aa7.56□□□□□ -1.2
HLA-DPA3-207ENST00000454398 MTFR1Q15390 333 aa7.56□□□□□ -1.2
HLA-DPA3-207ENST00000454398 FBXO33Q7Z6M2 555 aa7.56□□□□□ -1.2
HLA-DPA3-207ENST00000454398 FAM9BQ8IZU0 186 aa7.56□□□□□ -1.2
HLA-DPA3-207ENST00000454398 TEKT1Q969V4 418 aa7.56□□□□□ -1.2
HLA-DPA3-207ENST00000454398 COLQQ9Y215 455 aaPredicted RBP7.56□□□□□ -1.2
HLA-DPA3-207ENST00000454398 PTPRFP10586 1907 aa7.56□□□□□ -1.2
HLA-DPA3-207ENST00000454398 COL6A3P12111 3177 aa7.55□□□□□ -1.2
HLA-DPA3-207ENST00000454398 PRDX5P30044 214 aa7.55□□□□□ -1.2
HLA-DPA3-207ENST00000454398 GTF2A2P52657 109 aa7.55□□□□□ -1.2
HLA-DPA3-207ENST00000454398 INHBEP58166 350 aa7.55□□□□□ -1.2
HLA-DPA3-207ENST00000454398 MAP3K9P80192 1104 aa7.55□□□□□ -1.2
HLA-DPA3-207ENST00000454398 LACTBP83111 547 aaPredicted RBP7.55□□□□□ -1.2
HLA-DPA3-207ENST00000454398 UBE4AQ14139 1066 aa7.55□□□□□ -1.2
HLA-DPA3-207ENST00000454398 OTUD7BQ6GQQ9 843 aa7.55□□□□□ -1.2
HLA-DPA3-207ENST00000454398 APOBEC3HQ6NTF7 200 aaKnown RBP7.55□□□□□ -1.2
HLA-DPA3-207ENST00000454398 CCDC84Q86UT8 332 aaPredicted RBP7.55□□□□□ -1.2
HLA-DPA3-207ENST00000454398 TRIM47Q96LD4 638 aa7.55□□□□□ -1.2
HLA-DPA3-207ENST00000454398 SIL1Q9H173 461 aa7.55□□□□□ -1.2
HLA-DPA3-207ENST00000454398 ZFYVE28Q9HCC9 887 aa7.55□□□□□ -1.2
HLA-DPA3-207ENST00000454398 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.55□□□□□ -1.2
HLA-DPA3-207ENST00000454398 MGAMO43451 1857 aa7.55□□□□□ -1.2
HLA-DPA3-207ENST00000454398 DOCK1Q14185 1865 aa7.55□□□□□ -1.2
HLA-DPA3-207ENST00000454398 RPAP1Q9BWH6 1393 aaPredicted RBP7.55□□□□□ -1.2
HLA-DPA3-207ENST00000454398 MROH5Q6ZUA9 1318 aa7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 ZNF521Q96K83 1311 aa7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 ALDH1L1O75891 902 aa7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 CYP2C8P10632 490 aa7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 RFX5P48382 616 aaPredicted RBP7.54□□□□□ -1.2
HLA-DPA3-207ENST00000454398 TNNI2P48788 182 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms