RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 LPIN2Q92539 896 aa10.75□□□□□ -0.69
COL28A1-205ENST00000453441 ZBED2Q9BTP6 218 aa10.75□□□□□ -0.69
COL28A1-205ENST00000453441 COA1Q9GZY4 146 aa10.75□□□□□ -0.69
COL28A1-205ENST00000453441 SIL1Q9H173 461 aa10.75□□□□□ -0.69
COL28A1-205ENST00000453441 GPR108Q9NPR9 543 aa10.75□□□□□ -0.69
COL28A1-205ENST00000453441 ZNRF3Q9ULT6 936 aa10.75□□□□□ -0.69
COL28A1-205ENST00000453441 PA2G4Q9UQ80 394 aaKnown RBP10.75□□□□□ -0.69
COL28A1-205ENST00000453441 NEFLP07196 543 aa10.74□□□□□ -0.69
COL28A1-205ENST00000453441 EIF6P56537 245 aaKnown RBP10.74□□□□□ -0.69
COL28A1-205ENST00000453441 AOC3Q16853 763 aa10.74□□□□□ -0.69
COL28A1-205ENST00000453441 CAVIN4Q5BKX8 364 aa10.74□□□□□ -0.69
COL28A1-205ENST00000453441 ZNF804AQ7Z570 1209 aa10.74□□□□□ -0.69
COL28A1-205ENST00000453441 VPS9D1Q9Y2B5 631 aa10.74□□□□□ -0.69
COL28A1-205ENST00000453441 UTRNP46939 3433 aa10.74□□□□□ -0.69
COL28A1-205ENST00000453441 FZD9O00144 591 aa10.73□□□□□ -0.69
COL28A1-205ENST00000453441 MAP3K7O43318 606 aa10.73□□□□□ -0.69
COL28A1-205ENST00000453441 TAF5LO75529 589 aa10.73□□□□□ -0.69
COL28A1-205ENST00000453441 FGFR2P21802 821 aa10.73□□□□□ -0.69
COL28A1-205ENST00000453441 OSBPP22059 807 aa10.73□□□□□ -0.69
COL28A1-205ENST00000453441 HDAC1Q13547 482 aaPredicted RBP10.73□□□□□ -0.69
COL28A1-205ENST00000453441 TNIP1Q15025 636 aa10.73□□□□□ -0.69
COL28A1-205ENST00000453441 ATP2B3Q16720 1220 aa10.73□□□□□ -0.69
COL28A1-205ENST00000453441 SIRT2Q8IXJ6 389 aa10.73□□□□□ -0.69
COL28A1-205ENST00000453441 HELBQ8NG08 1087 aaPredicted RBP10.73□□□□□ -0.69
COL28A1-205ENST00000453441 EXOC6Q8TAG9 804 aa10.73□□□□□ -0.69
COL28A1-205ENST00000453441 KIF1BPQ96EK5 621 aa10.73□□□□□ -0.69
COL28A1-205ENST00000453441 ARAP2Q8WZ64 1704 aa10.72□□□□□ -0.69
COL28A1-205ENST00000453441 HRO43593 1189 aa10.72□□□□□ -0.69
COL28A1-205ENST00000453441 MMP14P50281 582 aa10.72□□□□□ -0.69
COL28A1-205ENST00000453441 PRELPP51888 382 aa10.72□□□□□ -0.69
COL28A1-205ENST00000453441 GCC1Q96CN9 775 aa10.72□□□□□ -0.69
COL28A1-205ENST00000453441 RWDD1Q9H446 243 aaPredicted RBP10.72□□□□□ -0.69
COL28A1-205ENST00000453441 DCTPP1Q9H773 170 aa10.72□□□□□ -0.69
COL28A1-205ENST00000453441 GNL3LQ9NVN8 582 aaKnown RBP10.72□□□□□ -0.69
COL28A1-205ENST00000453441 KDM2BQ8NHM5 1336 aa10.72□□□□□ -0.69
COL28A1-205ENST00000453441 IRS2Q9Y4H2 1338 aa10.72□□□□□ -0.69
COL28A1-205ENST00000453441 ZNF609O15014 1411 aa10.72□□□□□ -0.69
COL28A1-205ENST00000453441 SEMA3EO15041 775 aa10.71□□□□□ -0.69
COL28A1-205ENST00000453441 ECE2O60344 883 aa10.71□□□□□ -0.69
COL28A1-205ENST00000453441 SASH1O94885 1247 aa10.71□□□□□ -0.69
COL28A1-205ENST00000453441 IL1R1P14778 569 aa10.71□□□□□ -0.69
COL28A1-205ENST00000453441 HIBADHP31937 336 aaKnown RBP10.71□□□□□ -0.69
COL28A1-205ENST00000453441 TFCP2Q12800 502 aa10.71□□□□□ -0.69
COL28A1-205ENST00000453441 PSME4Q14997 1843 aa10.71□□□□□ -0.69
COL28A1-205ENST00000453441 ERICH6BQ5W0A0 696 aa10.71□□□□□ -0.69
COL28A1-205ENST00000453441 SLC51AQ86UW1 340 aa10.71□□□□□ -0.69
COL28A1-205ENST00000453441 VPS37DQ86XT2 251 aa10.71□□□□□ -0.69
COL28A1-205ENST00000453441 GPC2Q8N158 579 aa10.71□□□□□ -0.69
COL28A1-205ENST00000453441 CLASRPQ8N2M8 674 aaKnown RBP10.71□□□□□ -0.69
COL28A1-205ENST00000453441 EXOC6BQ9Y2D4 811 aa10.71□□□□□ -0.69
COL28A1-205ENST00000453441 PCDHB15Q9Y5E8 787 aa10.71□□□□□ -0.69
COL28A1-205ENST00000453441 MYO3BQ8WXR4 1341 aa10.7□□□□□ -0.7
COL28A1-205ENST00000453441 A0A1B0GUL7 405 aa10.7□□□□□ -0.7
COL28A1-205ENST00000453441 GLTPD2A6NH11 291 aa10.7□□□□□ -0.7
COL28A1-205ENST00000453441 COL9A1P20849 921 aa10.7□□□□□ -0.7
COL28A1-205ENST00000453441 RPS12P25398 132 aaKnown RBP10.7□□□□□ -0.7
COL28A1-205ENST00000453441 FKBP1AP62942 108 aaKnown RBP10.7□□□□□ -0.7
COL28A1-205ENST00000453441 CIAPIN1Q6FI81 312 aa10.7□□□□□ -0.7
COL28A1-205ENST00000453441 FBXO33Q7Z6M2 555 aa10.7□□□□□ -0.7
COL28A1-205ENST00000453441 RHPN1Q8TCX5 695 aa10.7□□□□□ -0.7
COL28A1-205ENST00000453441 LRRCC1Q9C099 1032 aa10.7□□□□□ -0.7
COL28A1-205ENST00000453441 CD209Q9NNX6 404 aa10.7□□□□□ -0.7
COL28A1-205ENST00000453441 COL4A5P29400 1685 aa10.69□□□□□ -0.7
COL28A1-205ENST00000453441 PDS5AQ29RF7 1337 aaKnown RBP10.69□□□□□ -0.7
COL28A1-205ENST00000453441 USP17L3A6NCW0 530 aa10.69□□□□□ -0.7
COL28A1-205ENST00000453441 USP17L4A6NCW7 530 aa10.69□□□□□ -0.7
COL28A1-205ENST00000453441 IGSF3O75054 1194 aa10.69□□□□□ -0.7
COL28A1-205ENST00000453441 YY1P25490 414 aa10.69□□□□□ -0.7
COL28A1-205ENST00000453441 TNNI3KQ59H18 835 aa10.69□□□□□ -0.7
COL28A1-205ENST00000453441 STRIP1Q5VSL9 837 aa10.69□□□□□ -0.7
COL28A1-205ENST00000453441 USP17L1Q7RTZ2 530 aa10.69□□□□□ -0.7
COL28A1-205ENST00000453441 TDRD7Q8NHU6 1098 aaKnown RBP10.69□□□□□ -0.7
COL28A1-205ENST00000453441 FAM84BQ96KN1 310 aaPredicted RBP10.69□□□□□ -0.7
COL28A1-205ENST00000453441 DBNDD1Q9H9R9 158 aa10.69□□□□□ -0.7
COL28A1-205ENST00000453441 FPGT-TNNI3KV9GXZ4 949 aa10.69□□□□□ -0.7
COL28A1-205ENST00000453441 SCN4AP35499 1836 aa10.68□□□□□ -0.7
COL28A1-205ENST00000453441 FAM205AQ6ZU69 1335 aa10.68□□□□□ -0.7
COL28A1-205ENST00000453441 WDR90Q96KV7 1748 aa10.68□□□□□ -0.7
COL28A1-205ENST00000453441 IQCA1LA6NCM1 817 aa10.68□□□□□ -0.7
COL28A1-205ENST00000453441 UQCRFS1P1P0C7P4 283 aa10.68□□□□□ -0.7
COL28A1-205ENST00000453441 MLLT3P42568 568 aaPredicted RBP10.68□□□□□ -0.7
COL28A1-205ENST00000453441 CXCL9Q07325 125 aa10.68□□□□□ -0.7
COL28A1-205ENST00000453441 CCDC158Q5M9N0 1113 aa10.68□□□□□ -0.7
COL28A1-205ENST00000453441 GORABQ5T7V8 394 aa10.68□□□□□ -0.7
COL28A1-205ENST00000453441 TXNRD3Q86VQ6 643 aa10.68□□□□□ -0.7
COL28A1-205ENST00000453441 AGBL3Q8NEM8 1001 aa10.68□□□□□ -0.7
COL28A1-205ENST00000453441 TBC1D22AQ8WUA7 517 aa10.68□□□□□ -0.7
COL28A1-205ENST00000453441 RNF166Q96A37 237 aaPredicted RBP10.68□□□□□ -0.7
COL28A1-205ENST00000453441 XAGE2Q96GT9 111 aa10.68□□□□□ -0.7
COL28A1-205ENST00000453441 ZNF512BQ96KM6 892 aaPredicted RBP10.68□□□□□ -0.7
COL28A1-205ENST00000453441 NEUROD6Q96NK8 337 aa10.68□□□□□ -0.7
COL28A1-205ENST00000453441 GPR101Q96P66 508 aaPredicted RBP10.68□□□□□ -0.7
COL28A1-205ENST00000453441 MYH13Q9UKX3 1938 aa10.68□□□□□ -0.7
COL28A1-205ENST00000453441 ZNF541Q9H0D2 1346 aa10.67□□□□□ -0.7
COL28A1-205ENST00000453441 SCN9AQ15858 1988 aa10.67□□□□□ -0.7
COL28A1-205ENST00000453441 YDJCA8MPS7 323 aa10.67□□□□□ -0.7
COL28A1-205ENST00000453441 BHMG1C9JSJ3 638 aaPredicted RBP10.67□□□□□ -0.7
COL28A1-205ENST00000453441 SNAP23O00161 211 aa10.67□□□□□ -0.7
COL28A1-205ENST00000453441 FRAT2O75474 233 aaPredicted RBP10.67□□□□□ -0.7
COL28A1-205ENST00000453441 VIL1P09327 827 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms