RNA–Protein interactions for RNA: ENST00000453007.1

SCN3A-205, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 1,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-205ENST00000453007 FOXD4L3Q6VB84 417 aaPredicted RBP9.04□□□□□ -0.96
SCN3A-205ENST00000453007 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.04□□□□□ -0.96
SCN3A-205ENST00000453007 Q8N3U1 123 aa9.04□□□□□ -0.96
SCN3A-205ENST00000453007 SLC7A3Q8WY07 619 aa9.04□□□□□ -0.96
SCN3A-205ENST00000453007 C8orf37Q96NL8 207 aa9.04□□□□□ -0.96
SCN3A-205ENST00000453007 HHIPQ96QV1 700 aa9.04□□□□□ -0.96
SCN3A-205ENST00000453007 SEC31BQ9NQW1 1179 aa9.04□□□□□ -0.96
SCN3A-205ENST00000453007 BIVM-ERCC5R4GMW8 1640 aa9.04□□□□□ -0.96
SCN3A-205ENST00000453007 RIMBP3CA6NJZ7 1639 aa9.03□□□□□ -0.96
SCN3A-205ENST00000453007 RIMBP3BA6NNM3 1639 aa9.03□□□□□ -0.96
SCN3A-205ENST00000453007 RIMBP3Q9UFD9 1639 aa9.03□□□□□ -0.96
SCN3A-205ENST00000453007 NFKBIEO00221 500 aa9.03□□□□□ -0.96
SCN3A-205ENST00000453007 IGHA2P01877 340 aa9.03□□□□□ -0.96
SCN3A-205ENST00000453007 MAPK8P45983 427 aa9.03□□□□□ -0.96
SCN3A-205ENST00000453007 DUOXA2Q1HG44 320 aa9.03□□□□□ -0.96
SCN3A-205ENST00000453007 FAM129BQ96TA1 746 aa9.03□□□□□ -0.96
SCN3A-205ENST00000453007 ZKSCAN3Q9BRR0 538 aa9.03□□□□□ -0.96
SCN3A-205ENST00000453007 KCNK4Q9NYG8 393 aa9.03□□□□□ -0.96
SCN3A-205ENST00000453007 ERCC6L2Q5T890 1561 aa9.03□□□□□ -0.96
SCN3A-205ENST00000453007 CLASP1Q7Z460 1538 aa9.02□□□□□ -0.97
SCN3A-205ENST00000453007 GPR182O15218 404 aa9.02□□□□□ -0.97
SCN3A-205ENST00000453007 WISP1O95388 367 aa9.02□□□□□ -0.97
SCN3A-205ENST00000453007 LDHBP07195 334 aaKnown RBP9.02□□□□□ -0.97
SCN3A-205ENST00000453007 DZIP1LQ8IYY4 767 aaKnown RBP9.02□□□□□ -0.97
SCN3A-205ENST00000453007 TMEM102Q8N9M5 508 aaPredicted RBP9.02□□□□□ -0.97
SCN3A-205ENST00000453007 ASAP3Q8TDY4 903 aa9.02□□□□□ -0.97
SCN3A-205ENST00000453007 KLHDC7BQ96G42 594 aa9.02□□□□□ -0.97
SCN3A-205ENST00000453007 FAM161BQ96MY7 647 aa9.02□□□□□ -0.97
SCN3A-205ENST00000453007 CHD1O14646 1710 aa9.01□□□□□ -0.97
SCN3A-205ENST00000453007 DDX3YO15523 660 aaKnown RBP9.01□□□□□ -0.97
SCN3A-205ENST00000453007 ARL4DP49703 201 aa9.01□□□□□ -0.97
SCN3A-205ENST00000453007 ZC3H6P61129 1189 aaKnown RBP9.01□□□□□ -0.97
SCN3A-205ENST00000453007 PIP4K2BP78356 416 aa9.01□□□□□ -0.97
SCN3A-205ENST00000453007 ZFYVE28Q9HCC9 887 aa9.01□□□□□ -0.97
SCN3A-205ENST00000453007 RNF19AQ9NV58 838 aa9.01□□□□□ -0.97
SCN3A-205ENST00000453007 PARP2Q9UGN5 583 aa9.01□□□□□ -0.97
SCN3A-205ENST00000453007 GRIN2AQ12879 1464 aa9.01□□□□□ -0.97
SCN3A-205ENST00000453007 FHAD1B1AJZ9 1412 aa9□□□□□ -0.97
SCN3A-205ENST00000453007 NUP160Q12769 1436 aa9□□□□□ -0.97
SCN3A-205ENST00000453007 PRPF40AO75400 957 aaKnown RBP9□□□□□ -0.97
SCN3A-205ENST00000453007 POLR3DP05423 398 aaPredicted RBP9□□□□□ -0.97
SCN3A-205ENST00000453007 XPCQ01831 940 aaPredicted RBP9□□□□□ -0.97
SCN3A-205ENST00000453007 PRR23CQ6ZRP0 262 aa9□□□□□ -0.97
SCN3A-205ENST00000453007 BSNDQ8WZ55 320 aa9□□□□□ -0.97
SCN3A-205ENST00000453007 WNT8BQ93098 351 aa9□□□□□ -0.97
SCN3A-205ENST00000453007 NXPE3Q969Y0 559 aa9□□□□□ -0.97
SCN3A-205ENST00000453007 DUSP9Q99956 384 aaKnown RBP9□□□□□ -0.97
SCN3A-205ENST00000453007 CEP41Q9BYV8 373 aa9□□□□□ -0.97
SCN3A-205ENST00000453007 NIF3L1Q9GZT8 377 aa9□□□□□ -0.97
SCN3A-205ENST00000453007 LATS2Q9NRM7 1088 aa9□□□□□ -0.97
SCN3A-205ENST00000453007 SCAMP3O14828 347 aaKnown RBP8.99□□□□□ -0.97
SCN3A-205ENST00000453007 NLRP12P59046 1061 aa8.99□□□□□ -0.97
SCN3A-205ENST00000453007 LDLRAD1Q5T700 205 aa8.99□□□□□ -0.97
SCN3A-205ENST00000453007 XP32Q5T750 250 aa8.99□□□□□ -0.97
SCN3A-205ENST00000453007 C9orf131Q5VYM1 1079 aa8.99□□□□□ -0.97
SCN3A-205ENST00000453007 UBASH3BQ8TF42 649 aa8.99□□□□□ -0.97
SCN3A-205ENST00000453007 ALKBH8Q96BT7 664 aaKnown RBP8.99□□□□□ -0.97
SCN3A-205ENST00000453007 SETDB2Q96T68 719 aa8.99□□□□□ -0.97
SCN3A-205ENST00000453007 OSGEPQ9NPF4 335 aa8.99□□□□□ -0.97
SCN3A-205ENST00000453007 WWC3Q9ULE0 1092 aa8.99□□□□□ -0.97
SCN3A-205ENST00000453007 SOX13Q9UN79 622 aa8.99□□□□□ -0.97
SCN3A-205ENST00000453007 ADAMTS12P58397 1594 aa8.99□□□□□ -0.97
SCN3A-205ENST00000453007 CEP170Q5SW79 1584 aa8.99□□□□□ -0.97
SCN3A-205ENST00000453007 ADAM11O75078 769 aa8.98□□□□□ -0.97
SCN3A-205ENST00000453007 ERCC5P28715 1186 aaPredicted RBP8.98□□□□□ -0.97
SCN3A-205ENST00000453007 HDLBPQ00341 1268 aaKnown RBP8.98□□□□□ -0.97
SCN3A-205ENST00000453007 IKBKEQ14164 716 aa8.98□□□□□ -0.97
SCN3A-205ENST00000453007 NAALADL2Q58DX5 795 aa8.98□□□□□ -0.97
SCN3A-205ENST00000453007 Q6ZS46 218 aa8.98□□□□□ -0.97
SCN3A-205ENST00000453007 SREK1Q8WXA9 508 aaKnown RBP8.98□□□□□ -0.97
SCN3A-205ENST00000453007 DRC1Q96MC2 740 aa8.98□□□□□ -0.97
SCN3A-205ENST00000453007 C19orf57Q0VDD7 668 aa8.97□□□□□ -0.97
SCN3A-205ENST00000453007 KIAA1211Q6ZU35 1233 aa8.97□□□□□ -0.97
SCN3A-205ENST00000453007 UBL7Q96S82 380 aaPredicted RBP8.97□□□□□ -0.97
SCN3A-205ENST00000453007 MRS2Q9HD23 443 aa8.97□□□□□ -0.97
SCN3A-205ENST00000453007 TM4SF5O14894 197 aa8.96□□□□□ -0.98
SCN3A-205ENST00000453007 FGD1P98174 961 aa8.96□□□□□ -0.98
SCN3A-205ENST00000453007 PEAR1Q5VY43 1037 aaPredicted RBP8.96□□□□□ -0.98
SCN3A-205ENST00000453007 TMC4Q7Z404 712 aa8.96□□□□□ -0.98
SCN3A-205ENST00000453007 TMEM87AQ8NBN3 555 aa8.96□□□□□ -0.98
SCN3A-205ENST00000453007 KIF27Q86VH2 1401 aa8.96□□□□□ -0.98
SCN3A-205ENST00000453007 SART1O43290 800 aaKnown RBP8.95□□□□□ -0.98
SCN3A-205ENST00000453007 CPNE3O75131 537 aaKnown RBP8.95□□□□□ -0.98
SCN3A-205ENST00000453007 DAB2P98082 770 aa8.95□□□□□ -0.98
SCN3A-205ENST00000453007 HGSNATQ68CP4 663 aa8.95□□□□□ -0.98
SCN3A-205ENST00000453007 UTP4Q969X6 686 aaKnown RBP8.95□□□□□ -0.98
SCN3A-205ENST00000453007 BHLHE41Q9C0J9 482 aaPredicted RBP8.95□□□□□ -0.98
SCN3A-205ENST00000453007 DNAJC25Q9H1X3 360 aa8.95□□□□□ -0.98
SCN3A-205ENST00000453007 CARMIL1Q5VZK9 1371 aa8.95□□□□□ -0.98
SCN3A-205ENST00000453007 ERICH3Q5RHP9 1530 aa8.95□□□□□ -0.98
SCN3A-205ENST00000453007 PBRM1Q86U86 1689 aa8.94□□□□□ -0.98
SCN3A-205ENST00000453007 PNMA6FA0A0J9YX94 578 aa8.94□□□□□ -0.98
SCN3A-205ENST00000453007 SOX1O00570 391 aaPredicted RBP8.94□□□□□ -0.98
SCN3A-205ENST00000453007 DHX15O43143 795 aaKnown RBP8.94□□□□□ -0.98
SCN3A-205ENST00000453007 SORBS3O60504 671 aa8.94□□□□□ -0.98
SCN3A-205ENST00000453007 ATP2B2Q01814 1243 aa8.94□□□□□ -0.98
SCN3A-205ENST00000453007 PSMD2Q13200 908 aa8.94□□□□□ -0.98
SCN3A-205ENST00000453007 ORC1Q13415 861 aa8.94□□□□□ -0.98
SCN3A-205ENST00000453007 ENOX2Q16206 610 aaKnown RBP8.94□□□□□ -0.98
SCN3A-205ENST00000453007 VN1R5Q7Z5H4 357 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms