RNA–Protein interactions for RNA: ENST00000452839.5

CCNT2-208, Transcript of cyclin T2, human

TSL 2

Gene CCNT2, Length 2,363 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNT2-208	ENST00000452839	ARID4A	P29374	1257 aa	Predicted RBP	13.68	□□□□□ -0.22
CCNT2-208	ENST00000452839	SGIP1	Q9BQI5	828 aa		13.68	□□□□□ -0.22
CCNT2-208	ENST00000452839	GNL3L	Q9NVN8	582 aa	Known RBP	13.68	□□□□□ -0.22
CCNT2-208	ENST00000452839		M0R2C6	588 aa		13.67	□□□□□ -0.22
CCNT2-208	ENST00000452839	UQCRFS1P1	P0C7P4	283 aa		13.67	□□□□□ -0.22
CCNT2-208	ENST00000452839	FBXO33	Q7Z6M2	555 aa		13.67	□□□□□ -0.22
CCNT2-208	ENST00000452839	CWC22	Q9HCG8	908 aa	Known RBP	13.67	□□□□□ -0.22
CCNT2-208	ENST00000452839	CD209	Q9NNX6	404 aa		13.67	□□□□□ -0.22
CCNT2-208	ENST00000452839	PIM2	Q9P1W9	311 aa		13.67	□□□□□ -0.22
CCNT2-208	ENST00000452839	LEMD3	Q9Y2U8	911 aa		13.67	□□□□□ -0.22
CCNT2-208	ENST00000452839	ZNF532	Q9HCE3	1301 aa		13.67	□□□□□ -0.22
CCNT2-208	ENST00000452839	SGSM2	O43147	1006 aa		13.67	□□□□□ -0.22
CCNT2-208	ENST00000452839	NCL	P19338	710 aa	Known RBP	13.67	□□□□□ -0.22
CCNT2-208	ENST00000452839	ATP2B4	P23634	1241 aa		13.67	□□□□□ -0.22
CCNT2-208	ENST00000452839	STYK1	Q6J9G0	422 aa		13.67	□□□□□ -0.22
CCNT2-208	ENST00000452839	NOL8	Q76FK4	1167 aa	Known RBP	13.67	□□□□□ -0.22
CCNT2-208	ENST00000452839	PALD1	Q9ULE6	856 aa		13.67	□□□□□ -0.22
CCNT2-208	ENST00000452839	LAMB2	P55268	1798 aa		13.67	□□□□□ -0.22
CCNT2-208	ENST00000452839	DIXDC1	Q155Q3	683 aa		13.66	□□□□□ -0.22
CCNT2-208	ENST00000452839	SASS6	Q6UVJ0	657 aa		13.66	□□□□□ -0.22
CCNT2-208	ENST00000452839	ADGRA1	Q86SQ6	560 aa		13.66	□□□□□ -0.22
CCNT2-208	ENST00000452839	GPT2	Q8TD30	523 aa		13.66	□□□□□ -0.22
CCNT2-208	ENST00000452839	COL1A1	P02452	1464 aa	Predicted RBP	13.66	□□□□□ -0.22
CCNT2-208	ENST00000452839	NRXN2	Q9P2S2	1712 aa		13.66	□□□□□ -0.22
CCNT2-208	ENST00000452839	APP	P05067	770 aa		13.66	□□□□□ -0.22
CCNT2-208	ENST00000452839	ZNF804A	Q7Z570	1209 aa		13.66	□□□□□ -0.22
CCNT2-208	ENST00000452839	LARP6	Q9BRS8	491 aa	Known RBP	13.66	□□□□□ -0.22
CCNT2-208	ENST00000452839	USP26	Q9BXU7	913 aa		13.66	□□□□□ -0.22
CCNT2-208	ENST00000452839	CCDC39	Q9UFE4	941 aa		13.66	□□□□□ -0.22
CCNT2-208	ENST00000452839	TAF6L	Q9Y6J9	622 aa		13.66	□□□□□ -0.22
CCNT2-208	ENST00000452839	ANKRD31	Q8N7Z5	1873 aa		13.65	□□□□□ -0.22
CCNT2-208	ENST00000452839	RNF113A	O15541	343 aa	Known RBP	13.65	□□□□□ -0.22
CCNT2-208	ENST00000452839	PPIP5K2	O43314	1243 aa		13.65	□□□□□ -0.22
CCNT2-208	ENST00000452839	DTNB	O60941	627 aa		13.65	□□□□□ -0.22
CCNT2-208	ENST00000452839	CPA1	P15085	419 aa		13.65	□□□□□ -0.22
CCNT2-208	ENST00000452839	COL9A3	Q14050	684 aa	Predicted RBP	13.65	□□□□□ -0.22
CCNT2-208	ENST00000452839	DALRD3	Q5D0E6	543 aa	Known RBP	13.65	□□□□□ -0.22
CCNT2-208	ENST00000452839	LRSAM1	Q6UWE0	723 aa		13.65	□□□□□ -0.22
CCNT2-208	ENST00000452839	C7orf43	Q8WVR3	580 aa		13.65	□□□□□ -0.22
CCNT2-208	ENST00000452839	PDE6A	P16499	860 aa		13.65	□□□□□ -0.22
CCNT2-208	ENST00000452839	PKP1	Q13835	747 aa		13.65	□□□□□ -0.22
CCNT2-208	ENST00000452839	PRPF40A	O75400	957 aa	Known RBP	13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	SCNN1D	P51172	638 aa		13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	HAND2	P61296	217 aa		13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	RASSF7	Q02833	373 aa		13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	MFSD14B	Q5SR56	506 aa		13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	TTLL5	Q6EMB2	1281 aa		13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	UPF3B	Q9BZI7	483 aa	Known RBP	13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	ARMT1	Q9H993	441 aa		13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	MAST3	O60307	1309 aa		13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	C10orf71	Q711Q0	1435 aa		13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	PRKAB2	O43741	272 aa		13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	RAD17	O75943	681 aa		13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	REC8	O95072	547 aa		13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	CYP7A1	P22680	504 aa		13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	DYNLL1	P63167	89 aa	Known RBP	13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	MAP3K12	Q12852	859 aa		13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	MCMDC2	Q4G0Z9	681 aa		13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	ZNF384	Q8TF68	577 aa		13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	DENND2A	Q9ULE3	1009 aa		13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	ZDHHC9	Q9Y397	364 aa		13.64	□□□□□ -0.23
CCNT2-208	ENST00000452839	LRP5	O75197	1615 aa		13.63	□□□□□ -0.23
CCNT2-208	ENST00000452839	TCEANC2	Q96MN5	208 aa		13.63	□□□□□ -0.23
CCNT2-208	ENST00000452839	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
CCNT2-208	ENST00000452839	RBM27	Q9P2N5	1060 aa	Known RBP	13.63	□□□□□ -0.23
CCNT2-208	ENST00000452839	IRS2	Q9Y4H2	1338 aa		13.63	□□□□□ -0.23
CCNT2-208	ENST00000452839	MECOM	Q03112	1051 aa		13.63	□□□□□ -0.23
CCNT2-208	ENST00000452839	RASEF	Q8IZ41	740 aa		13.63	□□□□□ -0.23
CCNT2-208	ENST00000452839	LARGE2	Q8N3Y3	721 aa		13.63	□□□□□ -0.23
CCNT2-208	ENST00000452839	SDR42E1	Q8WUS8	393 aa		13.63	□□□□□ -0.23
CCNT2-208	ENST00000452839	RUFY2	Q8WXA3	655 aa		13.63	□□□□□ -0.23
CCNT2-208	ENST00000452839	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
CCNT2-208	ENST00000452839	LSG1	Q9H089	658 aa	Known RBP	13.63	□□□□□ -0.23
CCNT2-208	ENST00000452839	TMEM63C	Q9P1W3	806 aa		13.63	□□□□□ -0.23
CCNT2-208	ENST00000452839	PCDHAC2	Q9Y5I4	1007 aa		13.63	□□□□□ -0.23
CCNT2-208	ENST00000452839	SLX4	Q8IY92	1834 aa		13.62	□□□□□ -0.23
CCNT2-208	ENST00000452839	SMIM22	K7EJ46	135 aa		13.62	□□□□□ -0.23
CCNT2-208	ENST00000452839	GPAA1	O43292	621 aa		13.62	□□□□□ -0.23
CCNT2-208	ENST00000452839	MBD4	O95243	580 aa		13.62	□□□□□ -0.23
CCNT2-208	ENST00000452839	ADD2	P35612	726 aa		13.62	□□□□□ -0.23
CCNT2-208	ENST00000452839	TTF1	Q15361	905 aa	Predicted RBP	13.62	□□□□□ -0.23
CCNT2-208	ENST00000452839	DZIP1	Q86YF9	867 aa	Known RBP	13.62	□□□□□ -0.23
CCNT2-208	ENST00000452839	KIAA0825	Q8IV33	1275 aa		13.62	□□□□□ -0.23
CCNT2-208	ENST00000452839	AIDA	Q96BJ3	306 aa		13.62	□□□□□ -0.23
CCNT2-208	ENST00000452839	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.62	□□□□□ -0.23
CCNT2-208	ENST00000452839	COL11A2	P13942	1736 aa	Predicted RBP	13.62	□□□□□ -0.23
CCNT2-208	ENST00000452839	ECE2	O60344	883 aa		13.61	□□□□□ -0.23
CCNT2-208	ENST00000452839	TGFB2	P61812	414 aa		13.61	□□□□□ -0.23
CCNT2-208	ENST00000452839	TDRD7	Q8NHU6	1098 aa	Known RBP	13.61	□□□□□ -0.23
CCNT2-208	ENST00000452839	CCDC93	Q567U6	631 aa		13.61	□□□□□ -0.23
CCNT2-208	ENST00000452839	ZMYM1	Q5SVZ6	1142 aa		13.61	□□□□□ -0.23
CCNT2-208	ENST00000452839	NAA16	Q6N069	864 aa	Predicted RBP	13.61	□□□□□ -0.23
CCNT2-208	ENST00000452839	LCORL	Q8N3X6	602 aa		13.61	□□□□□ -0.23
CCNT2-208	ENST00000452839	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
CCNT2-208	ENST00000452839	SYT17	Q9BSW7	474 aa		13.61	□□□□□ -0.23
CCNT2-208	ENST00000452839	INCENP	Q9NQS7	918 aa		13.61	□□□□□ -0.23
CCNT2-208	ENST00000452839	SCAF8	Q9UPN6	1271 aa	Known RBP	13.61	□□□□□ -0.23
CCNT2-208	ENST00000452839	RBM8A	Q9Y5S9	174 aa	Known RBP	13.61	□□□□□ -0.23
CCNT2-208	ENST00000452839	CACNA1S	Q13698	1873 aa		13.61	□□□□□ -0.23
CCNT2-208	ENST00000452839	LDHB	P07195	334 aa	Known RBP	13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms