RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 NFKB1P19838 968 aa5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 GNALP38405 381 aa5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 ADH7P40394 386 aa5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 USP5P45974 858 aa5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 CCINQ13939 588 aa5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 ETFBKMTQ8IXQ9 262 aa5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 PAF1Q8N7H5 531 aa5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 TSR2Q969E8 191 aaKnown RBP5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 PNMA5Q96PV4 448 aa5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 GSX2Q9BZM3 304 aa5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 EFCC1Q9HA90 598 aa5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 FANCLQ9NW38 375 aa5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 THRAP3Q9Y2W1 955 aaKnown RBP5.66□□□□□ -1.5
HMGB3P21-201ENST00000452483 GDF11O95390 407 aa5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 FOSP01100 380 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 ALAS2P22557 587 aa5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 POU5F1BQ06416 359 aa5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 TBC1D8BQ0IIM8 1120 aa5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 DSC3Q14574 896 aa5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 PPP2R5AQ15172 486 aa5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 ARSHQ5FYA8 562 aa5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 PCGF5Q86SE9 256 aa5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 TMEM151AQ8N4L1 468 aa5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 HELQQ8TDG4 1101 aa5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 APPBP2Q92624 585 aa5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 DMRTB1Q96MA1 342 aa5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 APBA2Q99767 749 aa5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 KRTAP9-2Q9BYQ4 174 aa5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 TRIM55Q9BYV6 548 aa5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 UBE2OQ9C0C9 1292 aaKnown RBP5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 SIRPGQ9P1W8 387 aa5.65□□□□□ -1.5
HMGB3P21-201ENST00000452483 PIK3R2O00459 728 aa5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 GNB5O14775 395 aa5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 OPLAHO14841 1288 aa5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 NRDCO43847 1150 aa5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 SSBP05455 408 aaKnown RBP eCLIP5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 CALRP27797 417 aaKnown RBP5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 FAM26DQ5JW98 314 aa5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 SYCP2LQ5T4T6 812 aa5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 HS2ST1Q7LGA3 356 aa5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 KRT25Q7Z3Z0 450 aa5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 PDILTQ8N807 584 aa5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 PPM1EQ8WY54 764 aa5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 CRELD1Q96HD1 420 aa5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 ZNF512BQ96KM6 892 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 CITED4Q96RK1 184 aa5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 PAGR1Q9BTK6 254 aa5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 C12orf49Q9H741 205 aa5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 MAP3K20Q9NYL2 800 aaKnown RBP5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 USP20Q9Y2K6 914 aa5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 RTCBQ9Y3I0 505 aaKnown RBP5.64□□□□□ -1.51
HMGB3P21-201ENST00000452483 IFRD1O00458 451 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 NPHP1O15259 732 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 HCLS1P14317 486 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 MAN1A1P33908 653 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 GJA8P48165 433 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 PAK2Q13177 524 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 VPS72Q15906 364 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 LINC00114Q6XXX2 140 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 RINLQ6ZS11 566 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 RAVER1Q8IY67 606 aaKnown RBP5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 CACTIN-AS1Q8N1I8 211 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 SAMD3Q8N6K7 520 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 ABTB2Q8N961 1025 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 SH3TC2Q8TF17 1288 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 GPRASP2Q96D09 838 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 SETDB2Q96T68 719 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 SRA1Q9HD15 236 aaKnown RBP5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 C11orf16Q9NQ32 467 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 SNTG2Q9NY99 539 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 STIM2Q9P246 746 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 GGT7Q9UJ14 662 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 SLC6A14Q9UN76 642 aa5.63□□□□□ -1.51
HMGB3P21-201ENST00000452483 CFAP69A5D8W1 941 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 M0R082 166 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 EPB41L2O43491 1005 aaKnown RBP5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 XYLBO75191 536 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 ALBP02768 609 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 MYL1P05976 194 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 RARAP10276 462 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 GNA15P30679 374 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 COPB2P35606 906 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 PDE6BP35913 854 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 ZAP70P43403 619 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 EXOSC10Q01780 885 aaKnown RBP5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 TRIP4Q15650 581 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 ALG1LQ6GMV1 187 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 HOMER1Q86YM7 354 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 KRTAP1-3Q8IUG1 177 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 CMTR1Q8N1G2 835 aaKnown RBP5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 ZNF417Q8TAU3 575 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 DEPDC7Q96QD5 511 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 ZNF587Q96SQ5 575 aaPredicted RBP5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 ARPC5LQ9BPX5 153 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 ZHX3Q9H4I2 956 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 IGFLR1Q9H665 355 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 DNAJB12Q9NXW2 375 aaKnown RBP5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 ZFATQ9P243 1243 aa5.62□□□□□ -1.51
HMGB3P21-201ENST00000452483 ANAPC4Q9UJX5 808 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms