RNA–Protein interactions for RNA: ENST00000451689.1

FAM49A-204, Transcript of family with sequence similarity 49 member A, humanhuman

TSL 4

Gene FAM49A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-204ENST00000451689 KCPQ6ZWJ8 1503 aa6.86□□□□□ -1.31
FAM49A-204ENST00000451689 SFI1A8K8P3 1242 aa6.86□□□□□ -1.31
FAM49A-204ENST00000451689 VAMP4O75379 141 aa6.86□□□□□ -1.31
FAM49A-204ENST00000451689 VSIG8P0DPA2 414 aa6.86□□□□□ -1.31
FAM49A-204ENST00000451689 SV2AQ7L0J3 742 aa6.86□□□□□ -1.31
FAM49A-204ENST00000451689 SSH1Q8WYL5 1049 aa6.86□□□□□ -1.31
FAM49A-204ENST00000451689 PNNQ9H307 717 aaKnown RBP6.86□□□□□ -1.31
FAM49A-204ENST00000451689 MYH16Q9H6N6 1097 aa6.86□□□□□ -1.31
FAM49A-204ENST00000451689 PARP3Q9Y6F1 533 aa6.86□□□□□ -1.31
FAM49A-204ENST00000451689 TUBGCP6Q96RT7 1819 aa6.85□□□□□ -1.31
FAM49A-204ENST00000451689 WDR17Q8IZU2 1322 aa6.85□□□□□ -1.31
FAM49A-204ENST00000451689 KDM2BQ8NHM5 1336 aa6.85□□□□□ -1.31
FAM49A-204ENST00000451689 RREB1Q92766 1687 aa6.85□□□□□ -1.31
FAM49A-204ENST00000451689 A6NJY4 79 aa6.85□□□□□ -1.31
FAM49A-204ENST00000451689 GPR25O00155 361 aa6.85□□□□□ -1.31
FAM49A-204ENST00000451689 CDK2AP1O14519 115 aa6.85□□□□□ -1.31
FAM49A-204ENST00000451689 LGR5O75473 907 aa6.85□□□□□ -1.31
FAM49A-204ENST00000451689 F11P03951 625 aa6.85□□□□□ -1.31
FAM49A-204ENST00000451689 CT47B1P0C2W7 299 aaPredicted RBP6.85□□□□□ -1.31
FAM49A-204ENST00000451689 PLA2G4AP47712 749 aa6.85□□□□□ -1.31
FAM49A-204ENST00000451689 ATP1A2P50993 1020 aa6.85□□□□□ -1.31
FAM49A-204ENST00000451689 WDR44Q5JSH3 913 aa6.85□□□□□ -1.31
FAM49A-204ENST00000451689 RNFT1Q5M7Z0 435 aa6.85□□□□□ -1.31
FAM49A-204ENST00000451689 RHBDD1Q8TEB9 315 aa6.85□□□□□ -1.31
FAM49A-204ENST00000451689 NANOS1Q8WY41 292 aaKnown RBP6.85□□□□□ -1.31
FAM49A-204ENST00000451689 AIDAQ96BJ3 306 aa6.85□□□□□ -1.31
FAM49A-204ENST00000451689 BCL2L13Q9BXK5 485 aa6.85□□□□□ -1.31
FAM49A-204ENST00000451689 COL25A1Q9BXS0 654 aaPredicted RBP6.85□□□□□ -1.31
FAM49A-204ENST00000451689 ARFGEF2Q9Y6D5 1785 aa6.85□□□□□ -1.31
FAM49A-204ENST00000451689 TNS2Q63HR2 1409 aa6.84□□□□□ -1.31
FAM49A-204ENST00000451689 BACH1O14867 736 aa6.84□□□□□ -1.31
FAM49A-204ENST00000451689 HTATSF1O43719 755 aaKnown RBP6.84□□□□□ -1.31
FAM49A-204ENST00000451689 MSX1P28360 303 aa6.84□□□□□ -1.31
FAM49A-204ENST00000451689 KRT76Q01546 638 aa6.84□□□□□ -1.31
FAM49A-204ENST00000451689 LMOD3Q0VAK6 560 aa6.84□□□□□ -1.31
FAM49A-204ENST00000451689 LARGE2Q8N3Y3 721 aa6.84□□□□□ -1.31
FAM49A-204ENST00000451689 GAS2L2Q8NHY3 880 aa6.84□□□□□ -1.31
FAM49A-204ENST00000451689 GTPBP3Q969Y2 492 aaKnown RBP6.84□□□□□ -1.31
FAM49A-204ENST00000451689 CNTNAP3BQ96NU0 1288 aa6.84□□□□□ -1.31
FAM49A-204ENST00000451689 NIFKQ9BYG3 293 aaKnown RBP6.84□□□□□ -1.31
FAM49A-204ENST00000451689 CNTNAP3Q9BZ76 1288 aa6.84□□□□□ -1.31
FAM49A-204ENST00000451689 LGR6Q9HBX8 967 aa6.84□□□□□ -1.31
FAM49A-204ENST00000451689 SBF2Q86WG5 1849 aa6.84□□□□□ -1.31
FAM49A-204ENST00000451689 ABCC4O15439 1325 aa6.83□□□□□ -1.32
FAM49A-204ENST00000451689 GNAT3A8MTJ3 354 aa6.83□□□□□ -1.32
FAM49A-204ENST00000451689 CYP27B1O15528 508 aa6.83□□□□□ -1.32
FAM49A-204ENST00000451689 DKK1O94907 266 aa6.83□□□□□ -1.32
FAM49A-204ENST00000451689 NEFMP07197 916 aa6.83□□□□□ -1.32
FAM49A-204ENST00000451689 TRIM27P14373 513 aa6.83□□□□□ -1.32
FAM49A-204ENST00000451689 GNAI1P63096 354 aa6.83□□□□□ -1.32
FAM49A-204ENST00000451689 MTFR1Q15390 333 aa6.83□□□□□ -1.32
FAM49A-204ENST00000451689 CRTC2Q53ET0 693 aaPredicted RBP6.83□□□□□ -1.32
FAM49A-204ENST00000451689 TRIM22Q8IYM9 498 aa6.83□□□□□ -1.32
FAM49A-204ENST00000451689 TSEN2Q8NCE0 465 aaKnown RBP6.83□□□□□ -1.32
FAM49A-204ENST00000451689 PANK1Q8TE04 598 aa6.83□□□□□ -1.32
FAM49A-204ENST00000451689 ZNF837Q96EG3 531 aaPredicted RBP6.83□□□□□ -1.32
FAM49A-204ENST00000451689 RUBCNLQ9H714 662 aa6.83□□□□□ -1.32
FAM49A-204ENST00000451689 VRTNQ9H8Y1 702 aa6.83□□□□□ -1.32
FAM49A-204ENST00000451689 MIS18AQ9NYP9 233 aa6.83□□□□□ -1.32
FAM49A-204ENST00000451689 SCHIP1Q9P0W5 487 aaPredicted RBP6.83□□□□□ -1.32
FAM49A-204ENST00000451689 IQSEC3Q9UPP2 1182 aaPredicted RBP6.83□□□□□ -1.32
FAM49A-204ENST00000451689 COL5A3P25940 1745 aaPredicted RBP6.83□□□□□ -1.32
FAM49A-204ENST00000451689 BCL9LQ86UU0 1499 aa6.83□□□□□ -1.32
FAM49A-204ENST00000451689 A0A1B0GTH6 734 aa6.82□□□□□ -1.32
FAM49A-204ENST00000451689 ZBTB7CA1YPR0 619 aa6.82□□□□□ -1.32
FAM49A-204ENST00000451689 KCNQ3O43525 872 aa6.82□□□□□ -1.32
FAM49A-204ENST00000451689 PDE3AQ14432 1141 aa6.82□□□□□ -1.32
FAM49A-204ENST00000451689 ALDH1L2Q3SY69 923 aa6.82□□□□□ -1.32
FAM49A-204ENST00000451689 LARP1Q6PKG0 1096 aaKnown RBP6.82□□□□□ -1.32
FAM49A-204ENST00000451689 ZNF295-AS1Q8N0V1 137 aa6.82□□□□□ -1.32
FAM49A-204ENST00000451689 ATP10DQ9P241 1426 aa6.82□□□□□ -1.32
FAM49A-204ENST00000451689 ZNF831Q5JPB2 1677 aa6.81□□□□□ -1.32
FAM49A-204ENST00000451689 PXDNLA1KZ92 1463 aa6.81□□□□□ -1.32
FAM49A-204ENST00000451689 RNMTO43148 476 aaKnown RBP6.81□□□□□ -1.32
FAM49A-204ENST00000451689 THBS1P07996 1170 aa6.81□□□□□ -1.32
FAM49A-204ENST00000451689 PHKG2P15735 406 aa6.81□□□□□ -1.32
FAM49A-204ENST00000451689 EPHA4P54764 986 aa6.81□□□□□ -1.32
FAM49A-204ENST00000451689 PTK7Q13308 1070 aa6.81□□□□□ -1.32
FAM49A-204ENST00000451689 AKAP4Q5JQC9 854 aa6.81□□□□□ -1.32
FAM49A-204ENST00000451689 ZNF530Q6P9A1 599 aaPredicted RBP6.81□□□□□ -1.32
FAM49A-204ENST00000451689 SLC9A9Q8IVB4 645 aa6.81□□□□□ -1.32
FAM49A-204ENST00000451689 PRDM11Q9NQV5 511 aa6.81□□□□□ -1.32
FAM49A-204ENST00000451689 AFDNP55196 1824 aaKnown RBP6.8□□□□□ -1.32
FAM49A-204ENST00000451689 BRWD3Q6RI45 1802 aa6.8□□□□□ -1.32
FAM49A-204ENST00000451689 CASZ1Q86V15 1759 aa6.8□□□□□ -1.32
FAM49A-204ENST00000451689 H7C1W4 665 aa6.8□□□□□ -1.32
FAM49A-204ENST00000451689 LORP23490 312 aaPredicted RBP6.8□□□□□ -1.32
FAM49A-204ENST00000451689 FOXK2Q01167 660 aa6.8□□□□□ -1.32
FAM49A-204ENST00000451689 CALD1Q05682 793 aaKnown RBP6.8□□□□□ -1.32
FAM49A-204ENST00000451689 DPYDQ12882 1025 aa6.8□□□□□ -1.32
FAM49A-204ENST00000451689 TWISTNBQ3B726 338 aaPredicted RBP6.8□□□□□ -1.32
FAM49A-204ENST00000451689 SKAP1Q86WV1 359 aa6.8□□□□□ -1.32
FAM49A-204ENST00000451689 SIX5Q8N196 739 aa6.8□□□□□ -1.32
FAM49A-204ENST00000451689 ZDHHC1Q8WTX9 485 aa6.8□□□□□ -1.32
FAM49A-204ENST00000451689 ZNF428Q96B54 188 aa6.8□□□□□ -1.32
FAM49A-204ENST00000451689 HINFPQ9BQA5 517 aa6.8□□□□□ -1.32
FAM49A-204ENST00000451689 CARD10Q9BWT7 1032 aa6.8□□□□□ -1.32
FAM49A-204ENST00000451689 NUCKS1Q9H1E3 243 aaKnown RBP6.8□□□□□ -1.32
FAM49A-204ENST00000451689 TSPAN10Q9H1Z9 355 aaPredicted RBP6.8□□□□□ -1.32
FAM49A-204ENST00000451689 BABAM1Q9NWV8 329 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms