RNA–Protein interactions for RNA: ENST00000449557.6

SCN5A-207, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 5 BASIC

Gene SCN5A, Length 5,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-207ENST00000449557 PEG3Q9GZU2 1588 aa13.24□□□□□ -0.29
SCN5A-207ENST00000449557 NUP160Q12769 1436 aa13.24□□□□□ -0.29
SCN5A-207ENST00000449557 KRT2P35908 639 aa13.24□□□□□ -0.29
SCN5A-207ENST00000449557 TRIM6Q9C030 488 aaPredicted RBP13.24□□□□□ -0.29
SCN5A-207ENST00000449557 BCCIPQ9P287 314 aaKnown RBP eCLIP13.24□□□□□ -0.29
SCN5A-207ENST00000449557 YEATS2Q9ULM3 1422 aa13.24□□□□□ -0.29
SCN5A-207ENST00000449557 CHMP2AO43633 222 aa13.24□□□□□ -0.29
SCN5A-207ENST00000449557 FNBP4Q8N3X1 1017 aaPredicted RBP13.24□□□□□ -0.29
SCN5A-207ENST00000449557 PRIMPOLQ96LW4 560 aa13.24□□□□□ -0.29
SCN5A-207ENST00000449557 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.24□□□□□ -0.29
SCN5A-207ENST00000449557 ZNF594Q96JF6 807 aaPredicted RBP13.24□□□□□ -0.29
SCN5A-207ENST00000449557 PUS7Q96PZ0 661 aaKnown RBP13.24□□□□□ -0.29
SCN5A-207ENST00000449557 ZMYND15Q9H091 742 aa13.24□□□□□ -0.29
SCN5A-207ENST00000449557 PHACTR3Q96KR7 559 aa13.24□□□□□ -0.29
SCN5A-207ENST00000449557 AZI2Q9H6S1 392 aa13.24□□□□□ -0.29
SCN5A-207ENST00000449557 ARMT1Q9H993 441 aa13.24□□□□□ -0.29
SCN5A-207ENST00000449557 PTPRKQ15262 1439 aa13.24□□□□□ -0.29
SCN5A-207ENST00000449557 A0A1B0GUL7 405 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 ERVV-2B6SEH9 535 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 CLCN1P35523 988 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 TBC1D22AQ8WUA7 517 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 SPAG5Q96R06 1193 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 ABT1Q9ULW3 272 aaKnown RBP13.23□□□□□ -0.29
SCN5A-207ENST00000449557 PAXBP1Q9Y5B6 917 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 CALCOCO1Q9P1Z2 691 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 TTF2Q9UNY4 1162 aaKnown RBP13.23□□□□□ -0.29
SCN5A-207ENST00000449557 CERS3Q8IU89 383 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 OTUD6BQ8N6M0 293 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 ESYT1Q9BSJ8 1104 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 LTKP29376 864 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 PDE1AP54750 535 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 DOK7Q18PE1 504 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 DYDC1Q8WWB3 177 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 POTEB2H3BUK9 544 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 MCM7P33993 719 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 MAP2K1Q02750 393 aaPredicted RBP13.23□□□□□ -0.29
SCN5A-207ENST00000449557 NOLC1Q14978 699 aaKnown RBP eCLIP13.23□□□□□ -0.29
SCN5A-207ENST00000449557 DCAF15Q66K64 600 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 ANKRD44Q8N8A2 993 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 SNX21Q969T3 373 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 TSNARE1Q96NA8 513 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 NAP1L4Q99733 375 aaKnown RBP13.23□□□□□ -0.29
SCN5A-207ENST00000449557 USP40Q9NVE5 1235 aa13.23□□□□□ -0.29
SCN5A-207ENST00000449557 TCP10L2B9ZVM9 353 aa13.22□□□□□ -0.29
SCN5A-207ENST00000449557 RBM28Q9NW13 759 aaKnown RBP13.22□□□□□ -0.29
SCN5A-207ENST00000449557 TIMM10P62072 90 aa13.22□□□□□ -0.29
SCN5A-207ENST00000449557 SLC1A4P43007 532 aa13.22□□□□□ -0.29
SCN5A-207ENST00000449557 PABPC4Q13310 644 aaKnown RBP eCLIP13.22□□□□□ -0.29
SCN5A-207ENST00000449557 RNF187Q5TA31 235 aaPredicted RBP13.22□□□□□ -0.29
SCN5A-207ENST00000449557 HS2ST1Q7LGA3 356 aa13.22□□□□□ -0.29
SCN5A-207ENST00000449557 MAPKAPK5Q8IW41 473 aa13.22□□□□□ -0.29
SCN5A-207ENST00000449557 XAGE2Q96GT9 111 aa13.22□□□□□ -0.29
SCN5A-207ENST00000449557 RPS8P62241 208 aaKnown RBP13.22□□□□□ -0.29
SCN5A-207ENST00000449557 GIMAP7Q8NHV1 300 aa13.22□□□□□ -0.29
SCN5A-207ENST00000449557 TEKT1Q969V4 418 aa13.22□□□□□ -0.29
SCN5A-207ENST00000449557 ZFP91Q96JP5 570 aaPredicted RBP13.22□□□□□ -0.29
SCN5A-207ENST00000449557 ALS2CR12Q96Q35 445 aa13.22□□□□□ -0.29
SCN5A-207ENST00000449557 PARD3Q8TEW0 1356 aa13.22□□□□□ -0.29
SCN5A-207ENST00000449557 CCDC171Q6TFL3 1326 aa13.21□□□□□ -0.29
SCN5A-207ENST00000449557 ATP7AQ04656 1500 aa13.21□□□□□ -0.29
SCN5A-207ENST00000449557 SYKP43405 635 aa13.21□□□□□ -0.29
SCN5A-207ENST00000449557 IFFO1Q0D2I5 559 aa13.21□□□□□ -0.29
SCN5A-207ENST00000449557 ZSWIM4Q9H7M6 989 aa13.21□□□□□ -0.29
SCN5A-207ENST00000449557 PRAG1Q86YV5 1406 aa13.21□□□□□ -0.29
SCN5A-207ENST00000449557 TTC41PQ6P2S7 1318 aa13.21□□□□□ -0.29
SCN5A-207ENST00000449557 TRIM75PA6NK02 468 aa13.21□□□□□ -0.29
SCN5A-207ENST00000449557 RXRAP19793 462 aa13.21□□□□□ -0.29
SCN5A-207ENST00000449557 TSPYL6Q8N831 410 aa13.21□□□□□ -0.29
SCN5A-207ENST00000449557 UNC13AQ9UPW8 1703 aa13.21□□□□□ -0.29
SCN5A-207ENST00000449557 PAFAH1B1P43034 410 aa13.21□□□□□ -0.29
SCN5A-207ENST00000449557 CTR9Q6PD62 1173 aa13.21□□□□□ -0.29
SCN5A-207ENST00000449557 COL17A1Q9UMD9 1497 aaPredicted RBP13.21□□□□□ -0.29
SCN5A-207ENST00000449557 NPHP4O75161 1426 aaPredicted RBP13.21□□□□□ -0.3
SCN5A-207ENST00000449557 PIK3C2GO75747 1445 aa13.21□□□□□ -0.3
SCN5A-207ENST00000449557 TAOK3Q9H2K8 898 aa13.21□□□□□ -0.3
SCN5A-207ENST00000449557 USPL1Q5W0Q7 1092 aa13.21□□□□□ -0.3
SCN5A-207ENST00000449557 TGFBRAP1Q8WUH2 860 aa13.21□□□□□ -0.3
SCN5A-207ENST00000449557 ZSCAN16Q9H4T2 348 aaPredicted RBP13.21□□□□□ -0.3
SCN5A-207ENST00000449557 EDC4Q6P2E9 1401 aaKnown RBP13.2□□□□□ -0.3
SCN5A-207ENST00000449557 GJC1P36383 396 aa13.2□□□□□ -0.3
SCN5A-207ENST00000449557 MFSD14BQ5SR56 506 aa13.2□□□□□ -0.3
SCN5A-207ENST00000449557 DDX39AO00148 427 aaKnown RBP13.2□□□□□ -0.3
SCN5A-207ENST00000449557 USH1GQ495M9 461 aa13.2□□□□□ -0.3
SCN5A-207ENST00000449557 GIGYF2Q6Y7W6 1299 aaKnown RBP13.2□□□□□ -0.3
SCN5A-207ENST00000449557 LPIN2Q92539 896 aa13.2□□□□□ -0.3
SCN5A-207ENST00000449557 CCDC169A6NNP5 214 aa13.2□□□□□ -0.3
SCN5A-207ENST00000449557 ARL1P40616 181 aaPredicted RBP13.2□□□□□ -0.3
SCN5A-207ENST00000449557 MSANTD4Q8NCY6 345 aa13.2□□□□□ -0.3
SCN5A-207ENST00000449557 ZBTB24O43167 697 aaPredicted RBP13.2□□□□□ -0.3
SCN5A-207ENST00000449557 F13A1P00488 732 aa13.2□□□□□ -0.3
SCN5A-207ENST00000449557 MROH5Q6ZUA9 1318 aa13.2□□□□□ -0.3
SCN5A-207ENST00000449557 GNG11P61952 73 aa13.19□□□□□ -0.3
SCN5A-207ENST00000449557 BMS1Q14692 1282 aaKnown RBP13.19□□□□□ -0.3
SCN5A-207ENST00000449557 SEPT12Q8IYM1 358 aa13.19□□□□□ -0.3
SCN5A-207ENST00000449557 KIFC2Q96AC6 838 aa13.19□□□□□ -0.3
SCN5A-207ENST00000449557 PRKAG2Q9UGJ0 569 aa13.19□□□□□ -0.3
SCN5A-207ENST00000449557 N4BP3O15049 544 aa13.19□□□□□ -0.3
SCN5A-207ENST00000449557 SEC24BO95487 1268 aa13.19□□□□□ -0.3
SCN5A-207ENST00000449557 DNM1Q05193 864 aaKnown RBP13.19□□□□□ -0.3
SCN5A-207ENST00000449557 KIAA0825Q8IV33 1275 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms