RNA–Protein interactions for RNA: ENST00000449407.6

SORBS2-231, Transcript of sorbin and SH3 domain containing 2, human

TSL 1 (best) BASIC

Gene SORBS2, Length 3,049 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS2-231	ENST00000449407	DHX37	Q8IY37	1157 aa	Known RBP	11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	EHD4	Q9H223	541 aa		11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	ANKRD26	Q9UPS8	1709 aa		11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	KIF28P	B7ZC32	967 aa		11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	FDPS	P14324	419 aa	Known RBP	11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	PDIA3	P30101	505 aa	Known RBP	11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	HSP90AB3P	Q58FF7	597 aa		11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	MPRIP	Q6WCQ1	1025 aa		11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	GSPT2	Q8IYD1	628 aa	Known RBP	11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	YY1AP1	Q9H869	796 aa		11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	RNF40	O75150	1001 aa		11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	CCT5	P48643	541 aa		11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	STX17	P56962	302 aa		11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	BRD3	Q15059	726 aa		11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	AXDND1	Q5T1B0	1012 aa	Predicted RBP	11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	NCAPH2	Q6IBW4	605 aa		11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	GRAMD1C	Q8IYS0	662 aa		11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	RAI14	Q9P0K7	980 aa		11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	NFE2L3	Q9Y4A8	694 aa		11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	CARMIL3	Q8ND23	1372 aa		11.89	□□□□□ -0.51
SORBS2-231	ENST00000449407	USP42	Q9H9J4	1324 aa	Known RBP	11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	ALDH1L1	O75891	902 aa		11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	MYSM1	Q5VVJ2	828 aa		11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	TC2N	Q8N9U0	490 aa		11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	NOA1	Q8NC60	698 aa	Known RBP	11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	SAMSN1	Q9NSI8	373 aa	Known RBP	11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	PSD3	Q9NYI0	1048 aa		11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	RTEL1	Q9NZ71	1219 aa		11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	L1RE1	Q9UN81	338 aa		11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	PCDHA5	Q9Y5H7	936 aa		11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	GOLIM4	O00461	696 aa		11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	KIF5C	O60282	957 aa		11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	MYL6B	P14649	208 aa		11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	CORO7	P57737	925 aa		11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	NGDN	Q8NEJ9	315 aa	Known RBP	11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	KCNG4	Q8TDN1	519 aa		11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	DBNDD2	Q9BQY9	259 aa		11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	NEDD4	P46934	1319 aa		11.88	□□□□□ -0.51
SORBS2-231	ENST00000449407	RIMS1	Q86UR5	1692 aa	Known RBP	11.87	□□□□□ -0.51
SORBS2-231	ENST00000449407	ARHGEF10	O15013	1369 aa		11.87	□□□□□ -0.51
SORBS2-231	ENST00000449407	CCDC175	P0C221	793 aa		11.87	□□□□□ -0.51
SORBS2-231	ENST00000449407	KCNJ6	P48051	423 aa		11.87	□□□□□ -0.51
SORBS2-231	ENST00000449407	NLRP6	P59044	892 aa		11.87	□□□□□ -0.51
SORBS2-231	ENST00000449407	SLC35F6	Q8N357	371 aa		11.87	□□□□□ -0.51
SORBS2-231	ENST00000449407	DBNL	Q9UJU6	430 aa	Known RBP	11.87	□□□□□ -0.51
SORBS2-231	ENST00000449407	ENC1	O14682	589 aa		11.87	□□□□□ -0.51
SORBS2-231	ENST00000449407	TFCP2	Q12800	502 aa		11.87	□□□□□ -0.51
SORBS2-231	ENST00000449407	PLPPR3	Q6T4P5	718 aa		11.87	□□□□□ -0.51
SORBS2-231	ENST00000449407	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.87	□□□□□ -0.51
SORBS2-231	ENST00000449407	ACRBP	Q8NEB7	543 aa		11.87	□□□□□ -0.51
SORBS2-231	ENST00000449407	SMARCC1	Q92922	1105 aa	Predicted RBP	11.87	□□□□□ -0.51
SORBS2-231	ENST00000449407	SAMM50	Q9Y512	469 aa		11.87	□□□□□ -0.51
SORBS2-231	ENST00000449407		U3KPZ7	1027 aa	Predicted RBP	11.87	□□□□□ -0.51
SORBS2-231	ENST00000449407	ADGRL3	Q9HAR2	1447 aa		11.87	□□□□□ -0.51
SORBS2-231	ENST00000449407	MED23	Q9ULK4	1368 aa		11.87	□□□□□ -0.51
SORBS2-231	ENST00000449407	TEX33	O43247	280 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	MRPS25	P82663	173 aa	Known RBP	11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	MCMDC2	Q4G0Z9	681 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	ANO1	Q5XXA6	986 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	SPECC1L	Q69YQ0	1117 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	TADA2B	Q86TJ2	420 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	BANK1	Q8NDB2	785 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	CAPZA3	Q96KX2	299 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	PREX1	Q8TCU6	1659 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	GOLGA8B	A8MQT2	603 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407		E7EWF7	191 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	ERLIN2	O94905	339 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	RAD9B	Q6WBX8	426 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	KAT2B	Q92831	832 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	KAZALD1	Q96I82	304 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	BRMS1	Q9HCU9	246 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	KIDINS220	Q9ULH0	1771 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	TUBGCP6	Q96RT7	1819 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	KLF18	A0A0U1RQI7	1052 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	BTBD11	A6QL63	1104 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	A1BG	P04217	495 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	EIF4A1	P60842	406 aa	Known RBP	11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	FMR1	Q06787	632 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	AFAP1L1	Q8TED9	768 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	CDC23	Q9UJX2	597 aa		11.86	□□□□□ -0.51
SORBS2-231	ENST00000449407	LMTK2	Q8IWU2	1503 aa		11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407	MET	P08581	1390 aa		11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407		A0A1W2PQ27	194 aa		11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407		A0A1W2PQ64	194 aa		11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407		A0A1W2PQD8	194 aa		11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407	CTAGE15	A4D2H0	777 aa		11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407	GRM8	O00222	908 aa		11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407	IKBKB	O14920	756 aa		11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407	STX10	O60499	249 aa		11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407	NPM1	P06748	294 aa	Known RBP eCLIP	11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407	CTAGE8	P0CG41	777 aa		11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407	EPHA10	Q5JZY3	1008 aa		11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407	CTAGE6	Q86UF2	777 aa		11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407	CTAGE4	Q8IX94	777 aa		11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407	IQUB	Q8NA54	791 aa		11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407	BPIFA3	Q9BQP9	254 aa		11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407	LLPH	Q9BRT6	129 aa	Known RBP	11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407	CXorf56	Q9H5V9	222 aa		11.85	□□□□□ -0.51
SORBS2-231	ENST00000449407	TFR2	Q9UP52	801 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms